Acidovorax sp. JS42: Ajs_4236
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Entry
Ajs_4236 CDS
T00455
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ajs
Acidovorax sp. JS42
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ajs03032
]
Ajs_4236
03036 Chromosome and associated proteins [BR:
ajs03036
]
Ajs_4236
03400 DNA repair and recombination proteins [BR:
ajs03400
]
Ajs_4236
DNA replication proteins [BR:
ajs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Ajs_4236
Chromosome and associated proteins [BR:
ajs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Ajs_4236
DNA repair and recombination proteins [BR:
ajs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Ajs_4236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ABM44336
LinkDB
All DBs
Position
pAOVO01:complement(64865..65140)
Genome browser
AA seq
91 aa
AA seq
DB search
MNRQDLIDAIAEDTEASKAATTRFLDSLITIVQNEVAKGGAVKLTGFGTFEKAAVAARTG
RNPKTGAPIKIPSTHKPKFTPGATFKDLVKD
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgacaagacctgatcgacgccattgctgaagacaccgaagcatccaaggcggcc
accacgcgctttctcgatagcctcatcaccatcgtgcaaaacgaggtggccaagggcggc
gcggtaaagctcaccggctttggcactttcgagaaagcagccgtcgcggcgcgcaccggg
cgcaacccgaagaccggcgcgccgatcaagattccctcgacccacaagccgaagttcacg
cctggggccacgttcaaggacttggtgaaggactga
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