Acinonyx jubatus (cheetah): 106966304
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Entry
106966304 CDS
T04657
Name
(RefSeq) nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju03013
Nucleocytoplasmic transport
aju05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106966304
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
106966304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aju03019
]
106966304
Messenger RNA biogenesis [BR:
aju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106966304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
TRS130_4HB
HEAT_SCC3-SA
Gar1
Motif
Other DBs
NCBI-GeneID:
106966304
NCBI-ProteinID:
XP_026891143
UniProt:
A0A6J1XFA2
LinkDB
All DBs
Position
D4:complement(6920020..6974323)
Genome browser
AA seq
1750 aa
AA seq
DB search
MAAAAGGPCVRSSRELWTILLGRSALRELNQIEAELNKHWQRLLEGLSYYKPPSPNSAEK
VKANKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQA
LILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVTKYRQQFEEL
YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLALTKMFK
EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG
LICQDMDRLMLTFGDIPHHAPVLLAWALLRHTLHPEETSSVVRKIGGTAIQLNVFQYLTR
LLRSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDVIDTACEVLADPSLPELF
WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH
KPHDVISHEDGTLWRRQTSKLLYPLGGQTNLRIPQGTVGQVVLDDRAYLVRWEYSYSSWT
LFTCEIEMLLHVVSTADVIQHCQRVRPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL
TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHQVSSMSQMISAEGMNA
GGYGNLLMNSEQPQGEYGVTVAFLRLITTLVKGQLGSTQSQGLAPCVMFVLKEMLPGYHK
WRYNTHGVREQIGCLILELIHAILNLCHEADLHSSHSPSLQSLCICSLAYTEAGQTVINI
MGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA
LTQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDA
FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGVWSCLH
AVLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT
LSPPSETSEPSVLETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSSEKRFAYWSGYVK
SLAVHTADTEGSSCTSLVEYQMLVSAWRMLLIIATSHAEVMHLTDPAVRRQLFLDVLDGT
KALLLVPASVNCLRLGSMMCTLLLILLRQWKRELGSVDEILGPLTEILEGVLQADQQLME
KTKAKVFSAFITVLQMKEMRVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLASGGATE
DKDSMETDDCSRPRHKDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLLTTL
EVSLRMKQNLHFTEASLHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSSNGTVQT
PSTSRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERTLQCLSAVRTV
QSLACLEEADHTVGFILQLSNFMKEWHFHLPQLMRDVQVNLGYLCQACTSLLHSRKMLQH
CLQNKNGDGIPSAVAPRVQRLPAAATAAPSCSSKQPAADTEASEQRALHTVQYGLLKILS
RTLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNVALN
MLGELDKKKEPLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAVRYLRDPAVHPRD
KQRMKQELSSELSTLLSSLSRYFRRGGPSSPAAGVLPSPQGKSTSLSKASPESQEPLIQL
VQAFVRHVQR
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgccggcgggccgtgtgtgaggagcagcagggaactgtggacaattctg
cttggaaggtcagctctgagagagctgaatcagattgaggcagaactgaataaacattgg
cagcggctcttagaggggctgtcctactataaacctcccagtccaaattcagctgaaaaa
gtgaaagctaataaagatgtggcttcaccattgaaggaactgggtttaagaatcagcaag
tttttgggtcttgacgaagaacagagtgtgcagttgctccagtgttaccttcaagaggat
tatagaggtactcgggactcactaaagacggtactgcaagacgagaggcagagccaggcc
ttaatcctgaagattgcagattattactatgaagaaagaacctgtattcttcgttgtgtc
ttacaccttctcacttatttccaagatgaaagacacccctatagggttgaatatgcagac
tgtgttgataaattggagaaggaactagtcacaaaatacagacagcagttcgaagagctt
tataaaactgaagcaccaacttgggagacacatggaaacctcatgactgagcgccaggta
tctcgctggtttgttcagtgccttcgggaacagtccatgctgctagaaattattttcctt
tattatgcatactttgagatggcacctagtgacctgttggcattaaccaagatgtttaaa
gagcaaggatttggtagtaggcagaccaacaggcacctggtggatgagaccatggaccct
ttcgtggataggattggctacttcagtgcccttatcctggtggaaggcatggatattgaa
tccttgcataagtgtgctttggatgacagaagagagctgcaccagtttgcccaggacggg
cttatttgtcaggatatggaccgtttgatgttgaccttcggggacattccacaccatgcc
ccagtgcttttggcctgggctcttctccgtcacaccctgcatccagaagagaccagcagc
gttgtccgaaagataggtggcacagccatccagctgaacgtatttcagtacttgacccga
ctgctccgctcgctggccagtgggggaaatgattgtaccaccagcaccgcgtgcatgtgt
gtgtatggactgctctctttcgttctcacctcgctggagctgcacacactgggcaaccag
caggatgtaattgacacagcatgtgaagtcctggcagatccttctcttccagaactattc
tggggaacggagccaacctctgggctcgggatcattctggacagtgtatgtgggatgttt
ccccatctcctctccccactcctgcagttgctacgagccctcgtatcaggaaagtctact
gccaaaaaggtgtacagtttcttggataagatgtctttctacaatgaactttacaagcac
aagccccatgatgtgatctcccacgaagatggaactctctggcggaggcaaacgtccaaa
ctcctttaccctcttgggggtcagaccaaccttcgcatacctcagggcacagtaggccag
gtagtgctggacgacagggcttacctggtacgctgggagtactcttacagtagctggacc
ctctttacctgcgagattgaaatgctgttgcatgttgtttccactgcagatgtgatccag
cactgccagcgggtcagacccatcattgatctggtccataaggtcatcagcacagatctg
tccatagcagactgtctcttgcccatcacatcccgtatctacatgctgctacagcggcta
acgacagtaatctctccaccggtggatgtcattgcttcttgtgtcaattgcttgactgtt
ttggctgcccggaaccctgcgaaggtctggactgatcttcgtcacacaggctttttacca
ttcgtggcccaccaggtctccagcatgagtcagatgattagtgcggaggggatgaatgct
ggagggtacggaaacctcttgatgaatagtgagcagccccagggcgagtacggggtcact
gttgcctttctacgcttgatcaccactcttgtcaaggggcagcttgggagtacccagagc
caagggctggcgccctgtgtcatgtttgtgctgaaggagatgcttcctggctaccacaag
tggcgctacaacacccatggtgtgagggaacagattggttgcctgatcctggagttgatt
catgcaatactgaacctgtgccatgaggcagacctgcacagcagtcacagccccagcctg
cagtctctctgcatctgcagcctggcctacacagaagcgggacagacagtcatcaatatc
atgggcatcggtgtggacaccatcgacatggtgatggctgctcagccccgcagtgatggg
gcagagggccaggggcagggccagctgctgatcaagacagtgaaactggcattctccgtc
accaacaatgttattcggctgaaacctccttctaatgtggtgtcccccctggaacaggct
ctcacacagcatggtgcccatgggaacaacctcattgctgttcttgccaaatacatctac
cacaaacatgatcctgctttgccacgtcttgccatccagctgttgaaacgtctggccacg
gtggccccaatgtcagtgtacgcctgcctgggcaatgatgcggctgccattcgagatgcc
ttcctgacccgactgcagagcaagattgaggacatgcgcatcaaagtcatgattctggag
ttcctcacggttgcagtagagactcagccaggcctcattgaactgtttctgaatctggag
gtgaaggatggcagcgatggctccaaggaattcagccttggggtatggagctgtctccac
gccgtgctggagctgatcgattcccagcagcaggaccgctactggtgtccacccctgctg
catcgtgcggccattgcctttctgcatgccctgtggcaggaccggcgggacagtgccatg
ctggtcctcagaactaaacccaaattttgggagaacttaaccagtccactgtttggaacc
ctttctcctccctcagaaacatctgagcccagcgtcctggaaacctgtgccctcatcatg
aagataatttgcttggaaatatactatgtagttaagggctctttagatcagtctttaaaa
gatacacttaagaaattttccagtgagaaacgctttgcctactggtcaggatatgtcaag
tcattggcagttcacacagcagacacggagggcagcagctgcacctccctggtagagtat
cagatgctcgtctccgcctggaggatgctcctcatcatcgccaccagtcatgcagaggta
atgcacctgactgaccctgcagtgcgtcgccagctctttcttgacgtgcttgatgggacc
aaagcattactcctggtccccgcctcagtgaactgcctccgcctcggatccatgatgtgc
actctgctgcttatcctcctccggcagtggaagagggagttaggttctgtggatgaaatc
cttgggcccttgacggagatcctggagggagtgctacaggcagaccagcaactcatggag
aagaccaaggccaaggtgttctcagcattcatcacagtgttgcagatgaaggagatgaga
gtgagtgacatcccccagtactcccagctggtgctgaatgtctgtgagaccctccaggaa
gaggtaattgctctcttcgaccagacccgccatagtctggcatcaggtggtgccacagag
gacaaggacagcatggagactgatgactgctcgaggccccggcacaaggaccagcgtgat
ggggtgtgtgtcctgggcctgcacctggccaaggagctgtgtgaggtggacgaagacggt
gactcatggctccaggtgactcgcaggctccccatcctgccaaccctcctcaccactctg
gaggtgagccttcgcatgaagcagaacctgcatttcaccgaggcatcattgcacctgctc
ctcactctggctcgcacccagcagggagccacagcagtagctggggctggcatcacccag
agcatttgtctgcccctcctgagcgtgtaccagcttagctccaatgggacagtgcagacg
cctagcacctctcggaagtctctggatgccccctcttggccgggggtctaccgcctctcc
atgtccttgatggagcggctcctcaaaactctgcgctacaacttcctgaccgaggccctg
gacttcgtgggtgttcaccaggagcggaccttacagtgcctcagtgcggtgaggacagta
cagagtctggcctgcctggaggaggcagaccacactgtgggcttcattctgcagctctcc
aacttcatgaaggaatggcacttccacctgcctcagcttatgcgagatgtccaggtaaac
ctgggctacctgtgccaggcctgcacctccctcctgcacagccgcaagatgctgcagcac
tgcttgcagaacaaaaacggggacggcatcccctcggctgtcgccccccgagttcagcgg
ctgcccgctgctgccactgccgccccctcctgctcttctaagcagcccgctgctgacacg
gaggcctcggagcagcgagccttacacacggtccagtacggacttctcaagatccttagc
aggaccctggcggctctgcgccatttcaccccagacgtctgccaaatcctgctggatcag
tccctggaccttgctgaatacaacttcctctttgccctgagcttcaccactcccaccttt
gactcagaagtggccccctccttcgggacccttctggccacggtgaatgtggccctaaac
atgcttggagagctggacaagaaaaaggagcccctcacccaggccgtggggctcagcaca
caggcggaagggaccagaacgctgaagtccctcctgatgttcaccatggaaaactgcttc
tacctgctcatctcccaggccgtgcgctaccttagggacccggccgtgcatccccgggac
aagcagcggatgaaacaggagctcagctcggagttgagcacgctgctctccagcctctca
cgctacttccgccggggaggccccagctcccccgctgccggcgtcctcccctcgcctcag
ggcaagtccacctcgctctccaaggccagcccggagagccaggagcctctgatccagcta
gtgcaggccttcgtgcggcacgtgcaaagatag
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integrated database retrieval system