KEGG   Acinonyx jubatus (cheetah): 106966304
Entry
106966304         CDS       T04657                                 
Name
(RefSeq) nucleoporin NUP188
  KO
K14311  nuclear pore complex protein Nup188
Organism
aju  Acinonyx jubatus (cheetah)
Pathway
aju03013  Nucleocytoplasmic transport
aju05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:aju00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106966304
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    106966304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aju03019]
    106966304
Messenger RNA biogenesis [BR:aju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     106966304
SSDB
Motif
Pfam: Nup188_N-subdom_III Nup188_N Nup188_SH3-like TRS130_4HB HEAT_SCC3-SA Gar1
Other DBs
NCBI-GeneID: 106966304
NCBI-ProteinID: XP_026891143
UniProt: A0A6J1XFA2
LinkDB
Position
D4:complement(6920020..6974323)
AA seq 1750 aa
MAAAAGGPCVRSSRELWTILLGRSALRELNQIEAELNKHWQRLLEGLSYYKPPSPNSAEK
VKANKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQA
LILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVTKYRQQFEEL
YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLALTKMFK
EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG
LICQDMDRLMLTFGDIPHHAPVLLAWALLRHTLHPEETSSVVRKIGGTAIQLNVFQYLTR
LLRSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDVIDTACEVLADPSLPELF
WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH
KPHDVISHEDGTLWRRQTSKLLYPLGGQTNLRIPQGTVGQVVLDDRAYLVRWEYSYSSWT
LFTCEIEMLLHVVSTADVIQHCQRVRPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL
TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHQVSSMSQMISAEGMNA
GGYGNLLMNSEQPQGEYGVTVAFLRLITTLVKGQLGSTQSQGLAPCVMFVLKEMLPGYHK
WRYNTHGVREQIGCLILELIHAILNLCHEADLHSSHSPSLQSLCICSLAYTEAGQTVINI
MGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA
LTQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDA
FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGVWSCLH
AVLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT
LSPPSETSEPSVLETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSSEKRFAYWSGYVK
SLAVHTADTEGSSCTSLVEYQMLVSAWRMLLIIATSHAEVMHLTDPAVRRQLFLDVLDGT
KALLLVPASVNCLRLGSMMCTLLLILLRQWKRELGSVDEILGPLTEILEGVLQADQQLME
KTKAKVFSAFITVLQMKEMRVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLASGGATE
DKDSMETDDCSRPRHKDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLLTTL
EVSLRMKQNLHFTEASLHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSSNGTVQT
PSTSRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERTLQCLSAVRTV
QSLACLEEADHTVGFILQLSNFMKEWHFHLPQLMRDVQVNLGYLCQACTSLLHSRKMLQH
CLQNKNGDGIPSAVAPRVQRLPAAATAAPSCSSKQPAADTEASEQRALHTVQYGLLKILS
RTLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNVALN
MLGELDKKKEPLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAVRYLRDPAVHPRD
KQRMKQELSSELSTLLSSLSRYFRRGGPSSPAAGVLPSPQGKSTSLSKASPESQEPLIQL
VQAFVRHVQR
NT seq 5253 nt   +upstreamnt  +downstreamnt
atggcggcggccgccggcgggccgtgtgtgaggagcagcagggaactgtggacaattctg
cttggaaggtcagctctgagagagctgaatcagattgaggcagaactgaataaacattgg
cagcggctcttagaggggctgtcctactataaacctcccagtccaaattcagctgaaaaa
gtgaaagctaataaagatgtggcttcaccattgaaggaactgggtttaagaatcagcaag
tttttgggtcttgacgaagaacagagtgtgcagttgctccagtgttaccttcaagaggat
tatagaggtactcgggactcactaaagacggtactgcaagacgagaggcagagccaggcc
ttaatcctgaagattgcagattattactatgaagaaagaacctgtattcttcgttgtgtc
ttacaccttctcacttatttccaagatgaaagacacccctatagggttgaatatgcagac
tgtgttgataaattggagaaggaactagtcacaaaatacagacagcagttcgaagagctt
tataaaactgaagcaccaacttgggagacacatggaaacctcatgactgagcgccaggta
tctcgctggtttgttcagtgccttcgggaacagtccatgctgctagaaattattttcctt
tattatgcatactttgagatggcacctagtgacctgttggcattaaccaagatgtttaaa
gagcaaggatttggtagtaggcagaccaacaggcacctggtggatgagaccatggaccct
ttcgtggataggattggctacttcagtgcccttatcctggtggaaggcatggatattgaa
tccttgcataagtgtgctttggatgacagaagagagctgcaccagtttgcccaggacggg
cttatttgtcaggatatggaccgtttgatgttgaccttcggggacattccacaccatgcc
ccagtgcttttggcctgggctcttctccgtcacaccctgcatccagaagagaccagcagc
gttgtccgaaagataggtggcacagccatccagctgaacgtatttcagtacttgacccga
ctgctccgctcgctggccagtgggggaaatgattgtaccaccagcaccgcgtgcatgtgt
gtgtatggactgctctctttcgttctcacctcgctggagctgcacacactgggcaaccag
caggatgtaattgacacagcatgtgaagtcctggcagatccttctcttccagaactattc
tggggaacggagccaacctctgggctcgggatcattctggacagtgtatgtgggatgttt
ccccatctcctctccccactcctgcagttgctacgagccctcgtatcaggaaagtctact
gccaaaaaggtgtacagtttcttggataagatgtctttctacaatgaactttacaagcac
aagccccatgatgtgatctcccacgaagatggaactctctggcggaggcaaacgtccaaa
ctcctttaccctcttgggggtcagaccaaccttcgcatacctcagggcacagtaggccag
gtagtgctggacgacagggcttacctggtacgctgggagtactcttacagtagctggacc
ctctttacctgcgagattgaaatgctgttgcatgttgtttccactgcagatgtgatccag
cactgccagcgggtcagacccatcattgatctggtccataaggtcatcagcacagatctg
tccatagcagactgtctcttgcccatcacatcccgtatctacatgctgctacagcggcta
acgacagtaatctctccaccggtggatgtcattgcttcttgtgtcaattgcttgactgtt
ttggctgcccggaaccctgcgaaggtctggactgatcttcgtcacacaggctttttacca
ttcgtggcccaccaggtctccagcatgagtcagatgattagtgcggaggggatgaatgct
ggagggtacggaaacctcttgatgaatagtgagcagccccagggcgagtacggggtcact
gttgcctttctacgcttgatcaccactcttgtcaaggggcagcttgggagtacccagagc
caagggctggcgccctgtgtcatgtttgtgctgaaggagatgcttcctggctaccacaag
tggcgctacaacacccatggtgtgagggaacagattggttgcctgatcctggagttgatt
catgcaatactgaacctgtgccatgaggcagacctgcacagcagtcacagccccagcctg
cagtctctctgcatctgcagcctggcctacacagaagcgggacagacagtcatcaatatc
atgggcatcggtgtggacaccatcgacatggtgatggctgctcagccccgcagtgatggg
gcagagggccaggggcagggccagctgctgatcaagacagtgaaactggcattctccgtc
accaacaatgttattcggctgaaacctccttctaatgtggtgtcccccctggaacaggct
ctcacacagcatggtgcccatgggaacaacctcattgctgttcttgccaaatacatctac
cacaaacatgatcctgctttgccacgtcttgccatccagctgttgaaacgtctggccacg
gtggccccaatgtcagtgtacgcctgcctgggcaatgatgcggctgccattcgagatgcc
ttcctgacccgactgcagagcaagattgaggacatgcgcatcaaagtcatgattctggag
ttcctcacggttgcagtagagactcagccaggcctcattgaactgtttctgaatctggag
gtgaaggatggcagcgatggctccaaggaattcagccttggggtatggagctgtctccac
gccgtgctggagctgatcgattcccagcagcaggaccgctactggtgtccacccctgctg
catcgtgcggccattgcctttctgcatgccctgtggcaggaccggcgggacagtgccatg
ctggtcctcagaactaaacccaaattttgggagaacttaaccagtccactgtttggaacc
ctttctcctccctcagaaacatctgagcccagcgtcctggaaacctgtgccctcatcatg
aagataatttgcttggaaatatactatgtagttaagggctctttagatcagtctttaaaa
gatacacttaagaaattttccagtgagaaacgctttgcctactggtcaggatatgtcaag
tcattggcagttcacacagcagacacggagggcagcagctgcacctccctggtagagtat
cagatgctcgtctccgcctggaggatgctcctcatcatcgccaccagtcatgcagaggta
atgcacctgactgaccctgcagtgcgtcgccagctctttcttgacgtgcttgatgggacc
aaagcattactcctggtccccgcctcagtgaactgcctccgcctcggatccatgatgtgc
actctgctgcttatcctcctccggcagtggaagagggagttaggttctgtggatgaaatc
cttgggcccttgacggagatcctggagggagtgctacaggcagaccagcaactcatggag
aagaccaaggccaaggtgttctcagcattcatcacagtgttgcagatgaaggagatgaga
gtgagtgacatcccccagtactcccagctggtgctgaatgtctgtgagaccctccaggaa
gaggtaattgctctcttcgaccagacccgccatagtctggcatcaggtggtgccacagag
gacaaggacagcatggagactgatgactgctcgaggccccggcacaaggaccagcgtgat
ggggtgtgtgtcctgggcctgcacctggccaaggagctgtgtgaggtggacgaagacggt
gactcatggctccaggtgactcgcaggctccccatcctgccaaccctcctcaccactctg
gaggtgagccttcgcatgaagcagaacctgcatttcaccgaggcatcattgcacctgctc
ctcactctggctcgcacccagcagggagccacagcagtagctggggctggcatcacccag
agcatttgtctgcccctcctgagcgtgtaccagcttagctccaatgggacagtgcagacg
cctagcacctctcggaagtctctggatgccccctcttggccgggggtctaccgcctctcc
atgtccttgatggagcggctcctcaaaactctgcgctacaacttcctgaccgaggccctg
gacttcgtgggtgttcaccaggagcggaccttacagtgcctcagtgcggtgaggacagta
cagagtctggcctgcctggaggaggcagaccacactgtgggcttcattctgcagctctcc
aacttcatgaaggaatggcacttccacctgcctcagcttatgcgagatgtccaggtaaac
ctgggctacctgtgccaggcctgcacctccctcctgcacagccgcaagatgctgcagcac
tgcttgcagaacaaaaacggggacggcatcccctcggctgtcgccccccgagttcagcgg
ctgcccgctgctgccactgccgccccctcctgctcttctaagcagcccgctgctgacacg
gaggcctcggagcagcgagccttacacacggtccagtacggacttctcaagatccttagc
aggaccctggcggctctgcgccatttcaccccagacgtctgccaaatcctgctggatcag
tccctggaccttgctgaatacaacttcctctttgccctgagcttcaccactcccaccttt
gactcagaagtggccccctccttcgggacccttctggccacggtgaatgtggccctaaac
atgcttggagagctggacaagaaaaaggagcccctcacccaggccgtggggctcagcaca
caggcggaagggaccagaacgctgaagtccctcctgatgttcaccatggaaaactgcttc
tacctgctcatctcccaggccgtgcgctaccttagggacccggccgtgcatccccgggac
aagcagcggatgaaacaggagctcagctcggagttgagcacgctgctctccagcctctca
cgctacttccgccggggaggccccagctcccccgctgccggcgtcctcccctcgcctcag
ggcaagtccacctcgctctccaaggccagcccggagagccaggagcctctgatccagcta
gtgcaggccttcgtgcggcacgtgcaaagatag

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