Acinonyx jubatus (cheetah): 106967010
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Entry
106967010 CDS
T04657
Name
(RefSeq) collagen alpha-1(XI) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju04820
Cytoskeleton in muscle cells
aju04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106967010
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
106967010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aju00536
]
106967010
Glycosaminoglycan binding proteins [BR:
aju00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106967010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
106967010
NCBI-ProteinID:
XP_026914273
UniProt:
A0A6J1ZB16
LinkDB
All DBs
Position
C1:complement(86481688..86696922)
Genome browser
AA seq
1806 aa
AA seq
DB search
MERWSSRWKTKRWLWNFTITTLALTFLFQASEVRGAAPVDVLKVLDFHNSPEGISKTTGF
CTNRKNSKGSDTAYRVSKQAQLSAPTKQLFSGGTFPEDFSILFTIKPKKGIQSFLLSIYN
EHGIQQVGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV
DCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQLLIIGDPKAAYDYCEHYS
PDCDSSVPQAAQAQEPQVDEYAPEDILEYDYEYGEAEYKEAEFVTETPTVAEETIAQTEA
NIVDDFQEYNYGTEESYHTEAPRHVSGTNEPNPVEEVFTEEYLTGEDYDSQRKNSEDTLY
ENKGIDGRDSDLLVDGDLGEYDFYEYKEYEDKPTSPTNEEFGPGVPAETDITETSINGHG
AYGEKGQKGEPAVVEPGMLIEGPPGPAGPAGLMGPPGLQGPTGPPGDPGERGPPGRPGLP
GADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRP
GPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDR
GFDGLPGLPGDKGHRGERGPQGPPGPPGEDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTP
GPTGQPGIAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKP
GLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEK
GEDGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVP
GLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKP
GPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKT
GPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKD
GPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQ
GPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSK
GDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQ
GLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSIGSVGGVGEKGEPGEA
GNPGPPGEAGTGGPKGERGEKGEAGAPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPP
GEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAK
GEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLP
GLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPIGPP
GPPGLPGPQGPKGTKGSTGPAGQKGDSGLPGPPGPPGPPGEVIQPLPILSPKKTRRHAEN
MQADAGDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDG
EYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFKRGKL
LSYLDVEGNSINMVQMTFLKLLTASARQNFTYTCHQSAAWYDVSSGSYDKALRFLGSNDE
EMSYDNNPFIKALYDGCASRKGYEKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVG
PVCFLG
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atggagcggtggtcctctaggtggaaaacgaaacggtggctctggaatttcaccataaca
accctcgcactgactttcctcttccaggctagtgaggtcagaggagctgctccagtcgat
gtactaaaagttctagattttcacaattctccagagggaatatcaaaaacaacgggcttt
tgcacaaacagaaagaattcaaaaggttcggatactgcttacagagtttcaaagcaagca
caactcagtgctccaacaaaacaattattttcaggaggaacttttccagaagatttttca
atattatttacaataaaacccaaaaaaggaattcagtctttccttttatctatatataac
gagcatggtattcagcaagtcggtgttgaggttgggagatcacctgttttcctgtttgaa
gaccacactgggaaacctgcccctgaagactatcccctcttcagaaccgttaacatcgct
gacgggaagtggcatcgggtcgcaattagcgtggagaagaagactgtgacaatgattgtt
gattgtaagaagaaaaccacaaaaccacttgatagaagtgagagagcaatcgttgacacc
aatggaatcacggtttttggaaccaggattttggatgaagaagtttttgagggggacatc
cagcagctgttgatcataggtgaccctaaagcagcatatgactactgtgagcattacagt
ccagactgtgactcttcagtaccccaggccgctcaggctcaggaacctcaggttgatgag
tatgcacctgaggatattctggaatatgactatgagtatggggaagcagagtataaagag
gctgaatttgtaacagagacacccactgtagctgaggagacaatagcacaaactgaggca
aatattgttgatgattttcaagaatacaactatggaacagaggaaagttaccatacagaa
gctcctaggcatgtatctggaacaaatgagccaaatccagttgaagaagtatttactgaa
gaatatctaactggagaggattatgattcccagaggaaaaattccgaggatacactatat
gaaaacaaaggaatagacggcagggactctgatcttctggtagatggagatttaggcgaa
tatgatttttatgaatataaagaatatgaagataaaccaacaagccccactaatgaagaa
tttggtccaggtgttccagcagaaacagatatcacagaaacaagcataaatggccacggt
gcatatggagaaaaaggacagaaaggagaaccagcagtagttgaacctggtatgcttatt
gaaggaccaccagggcctgcaggacctgcgggtcttatgggtcccccaggtctacaaggc
cccactggaccccctggtgaccctggagagaggggccccccaggacgtcctggcttacca
ggggctgatggtctacctggtcctcctgggaccatgttaatgttaccgtttcgttatggt
ggcgatggttccaaaggaccaaccatctctgctcaggaagctcaggcacaggcgattctt
cagcaggctcggattgctctgagaggtccacctggcccaatgggtctaactggaagaccg
ggtcctgtgggggggcctggttcatctggtgccaaaggtgagagtggtgatccaggtcct
cagggccctcgtggtgttcaaggcccacctggtccaacgggaaaacctggaaaaaggggt
cgtccgggtgctgatggaggaagaggcatgcccggagaacctggggcgaagggtgatcga
ggatttgatggacttccgggtctgccaggtgacaaaggtcacaggggtgaacggggtccg
caaggtcctcctggtccccctggagaagatggaatgaggggagaagatggagaaatcgga
ccaaggggtcttccaggtgaagctggtcctcgaggtttgctgggaccaagggggactcca
ggacctacagggcagcctggtattgcaggtgtagacggccccccaggaccaaaaggaaac
atgggtccccaaggggagcctggacctccaggtcagcaagggaatccaggacctcagggt
cttcctggtccacaaggtccaattggtcctcctggtgaaaaaggaccacaaggaaaacca
ggacttgcaggacttcctggtgctgatgggcctcctggtcatcctggaaaagaaggccag
tctggagaaaaaggtgctctgggtcctcctggtccacagggtcctattggttaccctggt
ccccgaggagtaaagggagcagatggtgtcagaggcctcaagggctctaaaggtgaaaag
ggtgaagatggttttccaggattcaaaggtgacatgggtcttaaaggtgacagaggagaa
gttggtcaagtaggtccaagaggagaagatggccctgaaggacccaagggtcgagcaggt
ccaactggagaccccggtccttctgggcaagcaggagagaaggggaaacttggtgttcca
ggattaccaggatatccaggaagacaaggtccaaagggttccactggatttcctgggttt
ccaggtgccaatggagagaaaggtgcacggggtgtagctggcaaaccaggacctcggggt
caacgtggcccaacaggtcctcgaggttcaagaggtgcgagaggtcccacggggaaacct
ggtccaaagggtacttcaggtggtgatggccctcctggccctcctggtgaaagaggccct
caaggacctcagggtccagttggattccctggacctaaaggtcctcctggaccacctggg
aaggatggcctgccaggacaccctggacaacgtggagagactggatttcaaggcaagact
ggccctccaggaccagggggtgtcgttggaccacagggaccaacgggtgagactggtcca
ataggtgaacgaggacatcctggccctcccggccctcctggtgagcaaggtcttcctggt
gctgcaggaaaagaaggtgcaaagggtgaccccggtcctcaaggtatctcagggaaagac
ggaccagcaggactgcgtggtttcccaggtgaaagaggtcttcctggagctcagggtgca
cctggactgaaaggaggggaaggtccccagggcccaccagggccagttggctcaccagga
gaacgcggatcagcgggtacagctggcccaattggattgccagggcgtccaggaccccag
ggtcctcctggtccagctggagagaaaggtgctcctggagaaaaaggtccccaaggccct
gcagggagagatggagtccaaggccctgtgggtctcccagggcctgctgggcctgcaggc
tcgcctggagaagatggagacaagggtgaaattggtgaaccaggacagaaaggcagcaag
ggtgacaaaggagaaaacggtcctcctggacctccaggtcttcaaggtcctgttggtgcc
cctggaattgctgggggtgatggtgagccaggtccccgaggtcagcaggggatgtttgga
caaaagggtgatgagggtgcaagaggtttcccaggacctcctggtccaataggtcttcag
ggtctgccgggcccacctggtgaaaaaggtgaaaatggggatgttggtcccatgggtcca
cctggtcctccaggcccaagaggccctcaaggtcccaatggagctgatggaccacaagga
cccccaggatccattggttcagttggtggtgttggagaaaagggtgagcctggagaagca
gggaacccagggccccctggggaagcaggcacaggcggccccaaaggagaaagaggagag
aaaggagaagctggtgcacctggtgctgctggacctcctggtgctaagggaccaccaggt
gacgatggccctaagggtaacccgggtcctgttggttttcccggagatcctggtcctcct
ggagaacctggccctgcaggtcaagatggtgttggtggtgacaagggtgaagacggagat
cctggtcaaccgggtccacctggcccatctggtgaggctggcccaccaggtcctcctgga
aaaagaggccctcctggagcagcaggtgcagagggaagacaaggagaaaaaggcgccaag
ggagaagcaggtgctgaaggcccacctggaaaaactggcccagttggtcctcagggacct
gctggaaagcctggtccagagggtcttcggggcatccctggccctgtgggagagcaaggt
ctccctggagctgcaggtcaagatgggcctcctggtcctatgggacctcctggcttacct
ggtctcaaaggtgaccccggttccaagggtgagaagggacatcctggtttaattggcctg
attggtcctccaggagaacaaggtgaaaagggtgacagaggactccctggaactcaagga
tctccaggagcaaagggggatggagggattccaggtcctgctggtcccataggtccccct
ggtcctccaggcttaccgggtcctcaaggtccaaagggtaccaaaggctctaccggacct
gctggccagaagggcgacagtggtcttccagggcctcctgggcccccgggtccacctgga
gaagtcattcagcctttaccaatcttgtcacccaaaaaaacaagaagacatgccgaaaac
atgcaagcagatgcaggtgataatattcttgactactcagatggaatggaggaaatattt
ggttccctcaactccctgaaacaagacatcgaacatatgaagtttcccatgggtacgcag
actaacccagctcgaacatgcaaagacctgcaactcagccatcctgacttcccagatggt
gaatactggattgatcccaaccaaggttgctcaggagattccttcaaagtttactgtaat
ttcacgtctggtggtgagacttgcatttatccagacaaaaaatctgagggagtaagaata
tcatcgtggccaaaggagaaaccaggaagctggtttagtgaatttaagagaggaaaactg
ctttcctatttagatgttgaaggaaattccattaatatggtgcaaatgacattcctgaaa
ctgctgactgcctctgctcggcaaaatttcacctacacctgtcatcagtcagcagcctgg
tatgatgtgtcatcaggaagttatgacaaagcactacggttcttgggatccaatgatgag
gagatgtcctatgacaacaaccctttcatcaaagcactatatgatggctgtgcgtccaga
aaaggctatgaaaaaactgtgattgaaatcaatacaccgaaaattgatcaagtacctatc
gttgatgtaatgatcaatgactttggtgatcagaatcagaaatttggatttgaagttggt
cctgtttgttttcttggctaa
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