KEGG   Acinonyx jubatus (cheetah): 106968305
Entry
106968305         CDS       T04657                                 
Name
(RefSeq) roquin-1 isoform X1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
aju  Acinonyx jubatus (cheetah)
Brite
KEGG Orthology (KO) [BR:aju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:aju03000]
    106968305
   04121 Ubiquitin system [BR:aju04121]
    106968305
Transcription factors [BR:aju03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    106968305
Ubiquitin system [BR:aju04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106968305
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 Prok-RING_4 zf-CCCH zf-C3HC4_3 zf-C3HC4 zf-CCCH_UNK zf-C3HC4_2 FYVE zf_CCCH_4 zf-CCCH_4 Vesi_VP2 PaaA_PaaC Baculo_IE-1 zf-RING_4 zf-RING_6 zf-RING_10
Other DBs
NCBI-GeneID: 106968305
NCBI-ProteinID: XP_026930041
UniProt: A0A6J2AJ67
LinkDB
Position
E4:52425959..52510510
AA seq 1133 aa
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAVLPDE
GAVDLPNRKTPALPNGIVSAGNTVTQLIPRGTDPTYDSSLKPGKIDHLSSSAPGSPPDLL
ESVPKSISALPVNPHPVPPRGPTDLPPMPVTKPLQMVPRGSQLYPAQQADVYYQDPRGAA
PPFEPAPYQQGMYYTPPPQCMSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQ
QYPPMYPPHYDGRRVYPAQSYTREEIFRESPIPIEIPPAAVPSYVPESRERYQQMEGYYP
VAPHPTQIRPSYIREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP
TLPPAFHQEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEM
MNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMA
PQGAPTKPMNISDYSPYGTHSGWGGSPYSPHQNIPSQGHFSERDRMSMSEVASHGKPLPS
AEREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREVNTLAGQSQPPPPPPPKWPGMI
SSEQLSLELHQVEREIGKRTRELSMENQCSLDMKGKLNTSKQAENGQPEPQSKVPAEDLT
LTFSDVPNGSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRSGVTPSSAP
NT seq 3402 nt   +upstreamnt  +downstreamnt
atgcctgtacaagctccacagtggacggatttcctctcctgcccaatttgcactcagact
ttcgatgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaataaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagac
attgagctcctccccgtgaactcagcattgctgcagctagtgggtgctcaggtccctgag
cagcagcccattactctgtgtagtggggttgaagatacaaagcattatgaggaagccaag
aaatgtgtagaagaattagcattgtacctgaaaccactcagcagtgctagaggagtgggt
ctgaatagcactactcagagtgttctgagtcgcccaatgcagaggaagctggtgactctg
gtccactgccaacttgtggaagaggaaggcaggattcgtgccatgagagcagctcgatct
ttaggtgaacgaacagttacagagctcattcttcaacaccaaaatcctcagcaactgtcc
tccaatctctgggcagcagtcagagctaggggctgccagttccttggaccagcaatgcag
gaggaagctctaaagctggttctcttggccttggaagatggttctgctttgtcaagaaaa
gtattggttctttttgtggtgcaaaggttggagccacggtttcctcaagcctctaaaact
agcattgggcatgttgtccagctcctttatagagcctcctgcttcaaggtcaccaaacgt
gatgaagactcttctttgatgcagctgaaggaagaatttagaacctatgaagctctgcgg
cgagaacacgactctcagatagtgcagattgccatggaagcaggcttacggattgcacca
gaccaatggtcctcattgctttatggagaccagtctcacaagtctcatatgcagtcaatc
attgacaagttgcagaccccagcgtcttttgcacaaagtgttcaggaactaacaattgct
ctccagcgaactggagatccagcaaacttgaaccgactaagaccccatttggagctactg
gcaaacattgaccctagtccagatgctcctcctcccacttgggaacagctagaaaatggg
ctggtggctgtgcgtacggtggtccatggtctggtagactatatccaaaaccatagcaaa
aagggaacagaccaacagcagcctccacagcacagcaaatataaaacatacatgtgtcga
gatatgaagcagaggggaggatgcccgcgtggggccagctgtacatttgcacactcacag
gaggaactggagaagtttcgtaaaatgaacaaacgcctggttcccagaagacccctgagt
gcctctttgggtcaacttaatgaggtgggcctgccctcagcagctgtccttccagatgaa
ggtgcagtggatctgcctaacagaaaaacccctgctctgccaaatggaattgtatcagca
gggaatacggtaacacagctgattccacgagggacagaccccacctacgattctagtctg
aaaccaggaaagatagatcatctgagcagtagtgcccctggatcccctcctgacttgctg
gaatctgtccctaagagtatttctgccttacctgtgaatccacatcctgtacctccaagg
gggccaacagacttgcctcctatgcctgtcaccaaaccccttcagatggtcccacggggt
tctcagttatatccagcgcaacaggcagatgtttattatcaggatcctcgaggagctgcc
ccaccatttgaaccagcaccttatcagcagggtatgtactacactccaccaccacagtgt
atgtcccgctttgtcagaccgccaccatctgctcctgaacctggtcctccctacttggat
cactatccaccctatctccaggatcgtgtagtaaactctcagtatggcacacagccacaa
cagtacccacctatgtacccgccacactatgatggccgccgagtgtaccctgctcagtca
tacacaagagaggagattttccgagaaagtcctattcccattgagattccacctgcagca
gtgccatcctatgtgccagaatccagagaaagataccaacagatggagggttactatcca
gtggctccccatccaactcagatcagaccttcgtacatcagagagcctccttatagccgg
cttcctcctcctcctcagccccatcctagtctagatgagctacatcgcagacgaaaggaa
ataatggcccagctagaggaaaggaaggttatctctccacctccttttgcaccttcacca
acattgcctcctgcctttcatcaagaggagtttctggacgaagacttgaaagtagctggg
aaatacaaaggaaatgattatagccagtattctccctggtcatgtgataccatcggctcc
tacattggcaccaaagatgcaaaacccaaagatgttgtggcagcagggagtgtggaaatg
atgaacgtggagagtaaaggaatgagagaccagcgactggatcttcaaagaagagcagca
gaaaccagtgatgatgaccttatccctttcggagaccgaccaaccgtttctcggtttggt
gccatctctcgaacctccaaaacaatatatcagggtgctggtccaatgcaggctatggca
cctcagggagctcccacaaaaccgatgaacatctcagattatagtccatatggaacccac
agtggctggggaggttctccatattcacctcatcaaaacataccttctcagggacacttc
agtgagagggacagaatgtccatgtcagaagtagccagtcatggaaaaccccttccatct
gctgagcgggaacagctacgactagaattgcagcaactaaaccatcaaattagtcagcag
acccagctacgtggcttagaggctgttagtaacaggctggtgttgcagagggaggtgaac
accctggcaggccagtcccagccaccaccaccaccacctccaaaatggcctggaatgatt
tcaagtgagcagttgagcttggaactgcaccaggtggaaagggaaatcgggaagagaacc
cgggaactgagtatggagaaccagtgttctctggacatgaaaggcaaattgaatacaagt
aagcaagcagaaaatggacaaccagaaccacaaagtaaggttccagctgaggaccttaca
ttgacattcagtgatgtaccaaatggatcagctttgacacaagagaatatcagcctcctg
tcaaacaagaccagctctctgaacctatcagaggaccctgagggaggaggtgacaacaat
gactcccagagatcgggagttactcccagttccgctccctaa

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