Acinonyx jubatus (cheetah): 106970711
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Entry
106970711 CDS
T04657
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju03440
Homologous recombination
aju03450
Non-homologous end-joining
aju04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106970711
03450 Non-homologous end-joining
106970711
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
106970711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aju03032
]
106970711
03400 DNA repair and recombination proteins [BR:
aju03400
]
106970711
DNA replication proteins [BR:
aju03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
106970711
DNA repair and recombination proteins [BR:
aju03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
106970711
BRCA1-C complex
106970711
NHEJ (non-homologous end-joining)
MRX complex
106970711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
AAA_29
DUF2703
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
106970711
NCBI-ProteinID:
XP_014922878
UniProt:
A0A6I9ZK22
LinkDB
All DBs
Position
A1:108127031..108214895
Genome browser
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALEMLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLISSKEI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLIDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHIRARDSLIQSLATQLELDGFERGPFSERHIKNFHKLVRERQEKETEIANQMMNDFAE
KETMKQKQIDEIRDKKTGLGRIIELKSEILSKKQNELRNVKYELQQLEGSSDRILELDQE
LSKAERELSKAEKNSNVEALKTEVISLQSEKADLDRTLRKLDQEMEQINHHTTTRTQMEM
LTKDKSDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHLNNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGLDLGRTVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LFREIKDAKEQLSPLETTLEKFQQEKEELINKKNASNKIAQDKTNDIKEKVKNIHGYMKD
IENYIQDGKDEYKKQKENELNKVIAQLSECEKHKENINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNDHQKLEEKIDNIKRNHSLAIGRQKG
YEEEIMHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSKYVEKFYRIKKNIDQCSEIVTCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggattgaaaagatgagcattctgggtgtgcggagttttggaatagaggacaaa
gataagcaaattatcacttttttcagccccctcacaattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtctaaaatatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttagagcc
cagattcgtctgcagtttcgtgatgtcaatggagaacttatagctgtgcagagatctatg
gtgtgtactcagaaaagcaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggtgagaaggtcagtctcagctctaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaagtctgtgctaaataatgtcattttttgtcaccaagaa
gactctaattggcctttaagtgaaggaaaggctctgaagcaaaaatttgatgagattttt
tcagcaacaaggtacattaaagccttggaaatgctgcggcaggtacgtcagacacaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatatttgaagcaaaacaaggaaaaagct
tgtgagatacgtgaccagattactagtaaggaagctcagttaatatcatcaaaggaaatt
gtcaaatcctatgagaacgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctttctaaaataatgagacttgacaatgaaatcaaagccttggatagccgaaagaag
cagatggaaaaagataatagtgaactggaacagaagatggaaaaggtttttcaagggact
gatgagcaactaaatgatttatatcacaatcaccagagaacagtgagggagaaagaaagg
agactgatagactgtcagcgtgaactggaaaagttaaataaagaatcaagacttctcaat
caggaaaaatcagaactgcttgttgaacagggtcgtctacagctacaagcagatcgccat
caagaacatatccgagctagagattcattaattcagtctttagcaacacagctagaattg
gatggctttgagcgtggaccattcagtgaaagacatattaaaaattttcacaaacttgtg
agagagagacaagagaaggaaacagaaattgccaaccaaatgatgaatgactttgcagaa
aaagagactatgaaacaaaaacagattgatgagataagggataagaaaactggactggga
agaataattgagctaaaatcagaaatcctaagtaagaagcagaatgagctgagaaatgtg
aagtatgaattacagcagttggaaggatcttcggacaggattcttgaactggaccaggag
ctctcaaaagctgaacgtgagctaagcaaggctgagaaaaacagcaatgtagaagctcta
aaaacagaagtaataagccttcaaagtgagaaagcagacctagacaggaccctgcgtaaa
ttggaccaagagatggaacagataaaccatcatacgacaacacgtacccagatggagatg
ctgaccaaagacaaatctgacaaagatgaacaaatcagaaagataaaatctcgacacagt
gatgaattaacttcattgttagggtattttcccaacaaaaagcagcttgaagactggctt
catagtaagtcaaaagaaattaatcagaccagggacagacttgccaaattgaacaaagaa
ctagcttcagctgagcaaaataaaaatcatttaaataatgaactaaaaaggaaagaagag
cagttgtccagttatgaagacaagctgtttgatgtttgtggtagccaggattttgaaagt
gatttagacagacttaaggaagaaattgaaaaatcctcaaaacaacgagccatgctggct
ggagccacggcagtttactcccagttcattactcagctaacggatgaaaaccagtcatgt
tgccctgtctgtcagagggtttttcagacagaagctgaattacaggaagtcatcagtgat
ttacagtctaagctgcggcttgctccagataaactcaagtcaacagaatcggaactaaag
aaaaaagaaaaacggcgtgatgaaatgctgggacttgtccccatgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcaaaatgtcaacagagac
atacagcgcttaaagaatgacatagaagaacaggaaacactcttgggcacaataatgcct
gaagaagaaagtgctaaagtatgcctgacagatgttacaattatggaaagattccagatg
gaacttaaagatgttgaaagaaaaattgcacagcaagcagctaagctgcaaggactagac
ttgggtagaactgtccagcaagtaaaccaggagaaacaagaaaaacaacacaagttagat
acagtttccagtaagattgaattgaatcgtaagcttatacaggaccagcaggaacagatt
caacacttaaagagtacaacaaatgaactgaagtcagagaaacttcagatatccactaat
ttacaacgtcgtcagcaactggaggagcagactgtggaattatccactgaagttcagtcc
ttattcagagagataaaggatgctaaagagcagttaagccctttagaaacaacattggag
aagttccagcaggaaaaagaagaattaatcaataaaaaaaatgcaagcaacaaaatagca
caggataaaacgaatgatatcaaagagaaagttaaaaatattcatggttatatgaaggat
attgagaattatattcaagatgggaaagatgagtataagaagcaaaaagaaaatgaactc
aataaagtgatagctcaactaagtgaatgtgagaaacacaaagaaaatataaataaagag
atgggaatcatgagacaagatattgatacacagaagatacaagaaagatggctacaagat
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaacag
catttgaaggaaatgggtcaaatgcaggtcttacaaatgaaaaatgatcatcagaaattg
gaagaaaaaatagataatataaaaagaaatcacagtttggcaatagggcgacagaaaggt
tatgaggaagaaattatgcattttaagagagaacttcgagaacctcagtttcgggatgcg
gaggaaaagtacagggaaatgatgattgtcatgagaacaacagagcttgtgaacaaggat
ctggacatttattataagacccttgaccaagcaatcatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaagtacctatcgtggacaagatatt
gaatacatagaaattcggtctgatgccgatgaaaatgtatcagcctctgataaaaggcgg
aattataactaccgagtggtgatgctgaagggagacacagccttggatatgcgaggacga
tgcagtgctggacagaaggtattagcctcactcatcattcgtctggccctggctgaaaca
ttctgcttgaactgtggcatccttgccctggatgagccaacaacaaatcttgacagagaa
aatattgaatctcttgcacatgctctcgttgagataataaagagtcgctcgcagcagcgt
aacttccagcttctggtaatcactcacgatgaggattttgtggagctcttagggcgttct
aaatatgtggagaaattctacaggattaagaagaacattgatcagtgctcagagattgtg
acatgtagtgttagctctctaggttcttatgttcattaa
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