Acinonyx jubatus (cheetah): 106971661
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Entry
106971661 CDS
T04657
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju03020
RNA polymerase
aju03420
Nucleotide excision repair
aju05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106971661
09124 Replication and repair
03420 Nucleotide excision repair
106971661
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
106971661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aju03021
]
106971661
03400 DNA repair and recombination proteins [BR:
aju03400
]
106971661
Enzymes [BR:
aju01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106971661
Transcription machinery [BR:
aju03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106971661
DNA repair and recombination proteins [BR:
aju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106971661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
106971661
NCBI-ProteinID:
XP_014924016
UniProt:
A0A6I9ZMU8
LinkDB
All DBs
Position
B1:complement(156306952..156348383)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELEGTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgcggacgaggatatgcaatatgatgaggatgatgatgaaatcaccccagac
ttgtggcaagaagcatgctggattgtaatcagttcctattttgatgagaaaggcttggtc
agacagcagctggattcttttgatgagtttattcagatgtctgttcaaagaattgtggaa
gatgccccacctatagacctacaagctgaagctcagcatgctagtggagaagttgaagaa
ccgccaagatatttgctgaagtttgaacaaatttacctctccaagcctacccattgggaa
agagatggtgctccttcaccaatgatgccaaacgaggccagattaagaaatctcacgtat
tctgctcccctttatgttgacataaccaaaactgtcattaaagaaggtgaagaacaactt
caaactcagcatcagaaaacttttataggaaaaattccaattatgttgcgttcaacttac
tgcctgttgaatggtttaacagatcgtgatctttgtgagttaaatgaatgccccttggat
ccaggtggatatttcattattaatgggtcagaaaaggttctgattgctcaagaaaaaatg
gcaacaaacacagtctatgtgtttgccaaaaaggattctaaatatgcctacacaggagag
tgtagatcatgtctggagaattcttcccgacccaccagtactatttgggttagcatgctg
gcgagaggaggacagggtgcaaaaaagagtgctattggtcagcgcattgtggcaacgcta
ccgtacatcaagcaggaagttcccatcattattgtgttcagagcattaggttttgtgtct
gacagagatattttagagcatattatttatgattttgaagatccagagatgatggaaatg
gtgaaaccttctctcgatgaagcttttgtcatccaagaacagaatgttgcactgaatttc
attggctcaagaggggcaaagcctggtgtcaccaaagagaaaagaattaaatatgcaaaa
gaagtcttacaaaaagaaatgctccctcatgtcggtgtcagtgatttttgtgagaccaaa
aaagcttatttcttggggtacatggttcatcggttgcttttagcagctttgggtagaaga
gaattagatgacagggatcactatggaaacaaaagattggatcttgctggaccactactt
gcattcttattcagaggtatgtttaagaatttgcttaaagaggtgcggatctatgcacag
aagtttattgatcgaggaaaggattttaacttggagttggcaattaaaacaaggattata
tctgatggcctaaaatattcgttagctactggaaactggggtgaccaaaagaaagctcat
caagccagagctggagtatctcaggtgttaaaccgcctgacatttgcatctactctttct
cacctgcgtcgtttaaattctcctattggtagagatggcaagctagcaaaaccaagacaa
ttgcataatacattgtggggaatggtgtgtcctgctgagaccccagagggccatgctgta
ggacttgtgaagaatttagccctgatggcttatatttcagttggatctcagccttctcca
attcttgaatttttagaagaatggagtatggaaaatttagaagaaatatctcctgcagct
attgctgatgcaaccaagatttttgttaatggctgctgggttggaatacataaagatcct
gaacaacttatgaacaccctgaggaagttgcggcgacagatggacatcattgtgtctgaa
gtttctatgatcagagatattcgagagcgggagattcggatctataccgatgcaggacgt
atttgtaggccacttctgattgtagaaaaacaaaaactacttctaaagaagagacatatt
gatcaattgaaagagagagaatataacaactacagttggcaggatcttgtggccagtggg
gtagtagaatatattgatactctggaagaagaaacagtgatgcttgcaatgactccagat
gatttacaggagaaagaagtagcttattgttccacatatacacactgcgagattcatcca
tcgatgattcttggtgtctgtgcatctattattccctttcctgatcataaccagtcccct
agaaacacataccagtctgctatgggtaagcaggctatgggagtttatatcaccaacttc
catgttcgtatggatacactggcccatgttctgtattatcctcaaaaaccacttgtgact
acacggtctatggaatatctacgatttagagagctgccagcaggtatcaactccattgtg
gcgatagcatcttacactggatataatcaagaagactctgttatcatgaatcgttcagct
gtagacagaggctttttcaggtctgttttctatcgatcatataaagaacaggaatctaaa
aaaggatttgatcaagaagaagtttttgagaagccaacccgtgaaacatgccaaggtatg
aggcatgccatttatgacaagctggatgatgatggtttgatagctcctggagtccgtgtg
tcaggagatgatgttattataggcaaaacagtcaccttgcctgaaaatgaagatgaattg
gagggcactaatcgacgctataccaagagagattgtagcacatttcttagaactagtgag
acgggaattgtggatcaggttatggtaactctcaatcaggaaggatataagttttgtaaa
ataagggtccgctctgttagaattccacagattggagacaaatttgctagtcgacatggt
caaaagggtacttgtggtattcagtatagacaagaggatatgcctttcacctgtgaaggt
atcacccctgatatcatcataaatccccatgccatcccctctcgtatgactattggtcac
ttgattgaatgtcttcaagggaaggtatcagctaacaaaggtgaaattggtgatgccact
ccatttaatgatgctgttaatgtgcagaagatttctaatctattatctgattatggctac
catctcagaggaaatgaggtcctgtacaatgggttcactggtcgaaaaatcacatcacaa
atttttattggtcctacatattaccagcgtttgaagcatatggtggatgataagattcat
tctcgtgccaggggacctattcagatccttaatagacagcccatggagggtagatctcgt
gatggtggcctgcgttttggagaaatggaacgagattgtcagattgcccatggagcagcc
cagtttttaagggaaagattgtttgaggcatcagatccctatcaggttcatgtttgcaat
ctttgtggaataatggcaattgctaacacgaggacccatacatatgaatgtcggggctgt
cgcaataaaactcagatttctttggtgcgaatgccttatgcgtgcaaactgctgtttcag
gaacttatgtctatgagtattgcgcctcgaatgatgagcgtctag
DBGET
integrated database retrieval system
