Acinonyx jubatus (cheetah): 106971778
Help
Entry
106971778 CDS
T04657
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
aju
Acinonyx jubatus (cheetah)
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aju03036
]
106971778 (SHOC1)
Chromosome and associated proteins [BR:
aju03036
]
Eukaryotic type
Meiosis-specific proteins
Others
106971778 (SHOC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHOC1_ATPase
SHOC1_PDDEXK
SHOC1_HhH_tandem
SHOC1_2HhH
Motif
Other DBs
NCBI-GeneID:
106971778
NCBI-ProteinID:
XP_026890625
UniProt:
A0A6J1XDS4
LinkDB
All DBs
Position
12
Genome browser
AA seq
1536 aa
AA seq
DB search
MHFYFGPDTCQEVAQETENFHKQILKFERLSEKEDMFSTFKYCAIDYLYENIVRKKFCRD
ALLLRIPSCLYQDGNYYAGVIDNKYRRPWMRASAVSVPGVTDLSVLDQWKASLFVEDFLE
KKTITGMVTQINCEFEEVVPSSNPNSQSEVEETSLYTHEDYTEVFTLVSGLEKYPALQAQ
NEDFSIDEEIIFVNSLMSYKSQLPTLHTLLSRLKLYLINDPILDFKGQIFTEANFFRESF
SFQGDLKNFVKEDFYMDKENFCQEKLEDTPSILLECEFLIPTSLKQEVDIPSLTKLKESL
NLMPEIINYVDENEKLFKRDLTTKHGIGIEDIKCSSTEILAIQSYGEPEYNQPVELEMPL
THLYQTNQHSSMTSLTGLQTFPFSPSEKTSLLTAEESATKYHMVWQLESSLKPFLLTVPR
AEEPSSQYSVTDLKKIFSIEEESLVVDPVNPEWWEKEGLNLMETETLEHLNTYLCHDDLS
ADDTKMEIFLPAKVLQFESWLEYKSCSSPIALINEKSTNDRLLLPQKISSLAKEIPDLCF
SDDYISVKRPTKEEKPKNDLELVYRISQNKENEDYLELNCTVPSIESSSSPKIEKSSFKQ
GRKWKNDLDLLNDFIVLRNKHRTCTSKTELTGSKENDEFQDKEEHSLTLQEESPIVCTNK
VIEKISQERKVDKVIEIQASDSQCQAFCLLEAAATPILKKLVCLCTLPAANWTFATVIFD
ETRFLLKEQEKVISDAIQQGMNDEREMTYKHAALLHLLVTIRDVLLTCCLDTALGYLSNA
KDIYRSILGSYLDNIWRQLEIVQFVREKKPETNYKIQELRCQILNWMQSEQQINVLIIIR
MDSDGEKHLLIKILNKMEGLTLTVLQNKRNDFLESEGVLNGTSSCVVAHNQYIGADFPWS
NFSFVVEYNFVEDSCWTKHCEKLNIPHMAFKVILPDTVLKRRTLLDSFGGFLLEIQVPYV
FFASEGLLNTPEILQLLESNYNITLVERSCSESLKLFGSTECYVVVTVDEHTAIVLQDLK
ELNCEKASDNIIMRLMALSFQYSYCWIILYTKKTLNSEYHLTEKALHHLALIYAALVSFG
LKSEELDVKLVLAPGVEEAALIVRQIADHSLMTSKRDPYEWLDKSWLEVSPSKEEMYLLD
FPCINPLVAQLMLNKGPSLHWILLATLCQLQELLPEVPGKVLKHFCSITSLFKISSSSIT
KSPQIPSPRENRNQASTITSQSSASGFSNSVFQEYNEYQNSDIGATVHKDTNITSNYNSS
LTQLREMPCILSPVTSYNQASYRKDSSCNPNIVHNPFLINIGSRNMAGNCFQNWNDSESD
VFSLDLTQMNCENIISPIDTQKRVAPNFINNQKKGTHVAKGPINKEVCTPNFSLEGSQSP
LPWNFKKNVWEQQNHSFNLEYGEKQTTCDKWYSQKDNLFTNQQKCLSDEVESFLHQSSNA
GTKKTFWRELPSVPSMDLFCASDPNVNQKEFSSLYFHQRAGKCLGQKRHSESSSNSGDKK
SLPDLMYSQLPQFKKRRLVYEKVPGRVDGQTRLRFF
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgcatttctattttggccccgatacctgtcaggaggtagcgcaagagacagaaaatttt
cataaacagatactgaaatttgaacgactttcagagaaagaagatatgttttcaacattc
aaatattgtgcaatagactatttatatgagaatatagttagaaagaagttttgcagagat
gctttgttgcttcgaatcccttcatgtttatatcaagatggaaattattatgcaggagtt
attgataataagtataggaggccatggatgagagcttcagctgtttcagtgccgggagtg
acagatctctcagtcttggatcaatggaaagcaagtctctttgtggaggattttcttgag
aaaaaaacaatcacaggaatggtgacccagattaactgtgaatttgaggaagttgttcca
agttcaaacccaaactcccaaagtgaagtagaggaaaccagtttatacacccatgaggac
tacactgaagtctttacacttgtcagcggtttagaaaaatatccagcacttcaagcacag
aatgaagatttttctattgatgaagaaataatttttgtaaatagcttgatgtcctataaa
agtcagctaccaactttgcatactctgttgagtaggctaaaactatatttgataaatgac
cccattttagatttcaaaggacagatcttcacagaagctaatttcttcagggaatctttc
tcttttcaaggagatttgaaaaattttgtgaaagaagatttttacatggataaagaaaac
ttttgtcaggaaaaactagaagatacaccatcaattttgcttgagtgtgaattcttaata
cctacaagcctcaaacaagaagttgatattccatcactcaccaaactaaaggaatcgtta
aacttaatgccagaaataataaattatgtagatgaaaatgaaaagcttttcaaaagagat
cttactaccaagcatggaattggcattgaggatataaaatgcagctccacagagattttg
gccattcaaagctatggtgaaccggagtacaatcaaccagtcgagttagaaatgccacta
actcatctatatcaaacaaaccaacattcttccatgacttcattaacaggacttcagaca
tttccattttctcctagtgaaaaaactagtttgcttactgctgaagaatcggctaccaaa
taccatatggtgtggcagttagaaagctctttgaaaccatttttgcttacagtgccaaga
gctgaagagcccagtagtcaatattcagttacagatttgaaaaagatattttctattgaa
gaagaaagccttgtagttgatcctgtaaacccagagtggtgggaaaaagaaggactaaat
ctaatggagacagaaactttggaacatctgaatacatatttgtgtcatgatgatctatct
gctgatgatactaaaatggagatatttttgcctgcaaaagtacttcaatttgagtcatgg
ctagaatataaaagttgttcctcacctattgcacttattaatgagaaatctacaaatgat
cgtttattgctcccacaaaagatttcatctctggcaaaagaaataccagacctgtgtttt
tctgatgactatatatctgttaaaagaccaacaaaagaagaaaaaccaaagaatgatcta
gaattagtttatagaataagccaaaataaagaaaatgaagattacttggaacttaactgc
acagtaccatctattgaatcatcttcctctccaaaaattgaaaaatcatcttttaaacaa
ggtagaaaatggaagaatgatttggaccttttgaatgactttattgtactgcgaaataaa
catagaacttgcacctcaaagactgaactcacgggcagtaaagaaaatgatgaatttcaa
gataaagaagaacattccttgactcttcaagaagaaagtcccattgtttgtactaataaa
gtcatagagaaaataagtcaggaaaggaaagtagacaaggtcattgaaattcaagcatca
gatagccagtgccaagcattctgtctcctagaagcagcagctactcctatcttaaaaaaa
cttgtatgcctctgtactctccctgctgctaattggacatttgccactgtcatttttgat
gaaacaagattcctcttaaaggaacaagaaaaagtaataagtgatgctattcagcaaggt
atgaatgatgaaagagaaatgacatacaagcatgctgctctcttacatcttctggtaaca
attagagatgtccttttaacatgctgcttggacacagcattgggatatttgtcaaatgca
aaagatatctacagaagcattttaggctcctatctggacaacatttggagacagctggag
attgtacagtttgttagggaaaaaaagcctgaaaccaattacaagatacaagaactgcga
tgccagatactaaattggatgcagagtgaacagcagattaatgtgctgattataataaga
atggactcagatggtgagaaacatttactcattaaaatccttaacaaaatggaaggttta
acactgactgtcttacaaaacaaaagaaatgattttctggaatctgaaggtgttttaaat
ggtacaagttcctgtgtagttgcacataatcaatatattggagcagatttcccctggagt
aacttctcatttgtggtggaatacaattttgtagaagactcttgttggactaaacactgc
gagaaattgaatattcctcacatggcctttaaagtgattcttccagacacagtattaaag
agaagaaccttgctggatagttttgggggctttcttttggaaattcaggttccatatgtg
ttttttgcatctgaaggacttcttaatactccagaaattcttcagttgctagaatccaac
tataatatcacactagtggagagaagctgcagtgagtcactgaaactctttggaagtaca
gagtgttatgtagtggtgacagttgatgaacacaccgccatagttttgcaggacctaaaa
gaattgaattgtgagaaggcatcggacaatatcattatgagactgatggcattatcattc
cagtacagctattgttggataattttatataccaaaaaaacattaaactcagagtaccat
cttacagaaaaggcacttcatcatctagcactgatttatgcagctttggtttcatttggg
ctaaaatcagaagaactggatgtaaagcttgtacttgccccaggagtggaagaggctgca
ctgatagttcgacaaattgctgatcacagtttaatgacctcgaagagagatccttatgaa
tggttggataaatcctggcttgaagtttcaccatctaaggaagaaatgtacttacttgac
tttccatgtattaacccattggtggctcagctcatgttaaataaaggaccatcactgcac
tggatattattagcaactctttgtcagcttcaggaacttttacctgaagttccaggaaaa
gtcttaaagcatttttgtagcatcacttccttattcaagattagttcttcttccataaca
aaatcacctcaaattccatcacctcgggaaaacaggaatcaggctagtaccattacctcc
cagagttcagcttctggcttttcaaactctgtctttcaagaatataatgaataccagaat
tcagacataggagccacagtgcacaaagacacaaacatcacttcaaactataactcttcc
cttacgcaactcagagaaatgccatgcattttatcacctgtgacttcttataatcaggcc
agctaccggaaagactccagttgtaatcctaatatagtacataatcctttcctaattaat
ataggatcaaggaacatggctggtaactgctttcaaaactggaatgattcagagtcagat
gttttttctttggatctaacacaaatgaactgtgaaaatataatatcaccaattgacact
cagaagagagttgcccctaattttataaataatcagaaaaagggaacacatgttgcaaaa
ggacctataaataaagaagtatgtacccctaacttttcactggaaggctctcaatctcct
cttccctggaacttcaagaaaaatgtatgggaacaacagaatcactcattcaacttagaa
tatggtgaaaagcagactacatgtgacaaatggtactctcagaaagataatttattcact
aatcagcagaaatgtctttcggatgaggtagaaagcttccttcatcaaagttcaaatgct
gggactaaaaagactttctggagagaattaccatctgtccccagtatggatttattttgc
gcttctgatcctaatgtaaatcaaaaagaattcagcagtctttatttccaccaaagagct
gggaaatgtttaggacagaaaaggcactctgaatcttcatctaactcaggagacaaaaaa
tcattaccagatctcatgtattcacaactaccacaattcaaaaaacggcgtctagtgtat
gaaaaagtccctggtagagttgatggacaaactcgtctgaggtttttttga
DBGET
integrated database retrieval system
