Acinonyx jubatus (cheetah): 106972327
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Entry
106972327 CDS
T04657
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju04151
PI3K-Akt signaling pathway
aju04382
Cornified envelope formation
aju04510
Focal adhesion
aju04512
ECM-receptor interaction
aju04518
Integrin signaling
aju04820
Cytoskeleton in muscle cells
aju04926
Relaxin signaling pathway
aju04933
AGE-RAGE signaling pathway in diabetic complications
aju04974
Protein digestion and absorption
aju05146
Amoebiasis
aju05165
Human papillomavirus infection
aju05200
Pathways in cancer
aju05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
106972327
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106972327
04518 Integrin signaling
106972327
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106972327
09142 Cell motility
04820 Cytoskeleton in muscle cells
106972327
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
106972327
09154 Digestive system
04974 Protein digestion and absorption
106972327
09158 Development and regeneration
04382 Cornified envelope formation
106972327
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
106972327
09162 Cancer: specific types
05222 Small cell lung cancer
106972327
09172 Infectious disease: viral
05165 Human papillomavirus infection
106972327
09174 Infectious disease: parasitic
05146 Amoebiasis
106972327
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
106972327
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aju04147
]
106972327
00536 Glycosaminoglycan binding proteins [BR:
aju00536
]
106972327
Exosome [BR:
aju04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106972327
Glycosaminoglycan binding proteins [BR:
aju00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106972327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106972327
NCBI-ProteinID:
XP_026904601
UniProt:
A0A6J1YJB2
LinkDB
All DBs
Position
C1:complement(206583663..206713810)
Genome browser
AA seq
1686 aa
AA seq
DB search
MASIKYSFRWIKPLATDPWLLILILLSVQHMYASAKKFIGPCGGRDCSVCQCFPEKGSRG
QPGLPGPQGPIGPLGLPGPIGIPGEKGMRGDSGPPGAAGDKGDKGPTGVPGFPGLDGIPG
HPGPPGSRGKPGMHGYNGSRGDPGLPGERGVPGPRGPPGLPGENGEKGNSVFILGAIKGI
PGDRGDPGPPGLPGSRGARGPAGPMGHPGEPGLPGAPGHPGRPGLKGNPGVGVKGQMGEP
GEVGQQGSPGPTLLVQPPDSCLYKGEKGIKGMPGVTGPPGPPGPKGKPGFGAKGEKGVPG
FSGPRGDPGSYGLPGFPGLKGEPGLFGDPGSFGFLGPKGDPGDRGYPGPPGVLVTPSLPL
KGPPGDPGRPGRYGETGSVGPPGPPGPSGPPGETCAGMMGPPGPGGFPGHPGFPGAAGIP
GRADSTPGKPGSPGPPGLPGAPGLQGPPGSDVIYCSVGHPGPQGIKGKAGPPGRRGSKGE
KGNAGLCACEPGPMGPPGPPGLPGRQGSKGDLGLPGWLGEKGHPGPPGAEGSPGPPGKPG
AAGPLGSKGEKGDMVVSRVKGQKGERGPDGLPGFPGQQGQHGRDGLPGERGDPGPPGDHE
DAAPGAKGFPGLPGPPGRTGPKGQPGLGFPGPPGERGPPGAPGRPGERGLEGLKGQKGDT
ISCNVTYPGRPGPPGFDGAPGPKGLPGPPGAPGLRCLDGPKGQRGKPGISEIPGPPGFRG
DIGDPGFGGAKGSSLPGPPGSPGSRGANGQKGIMGDTAYGHPGPPGERGLAGVPGSKGHR
GDPGPPGFAGPAGLPGFPGLKGPRGREGSAGFPGIPGPPGHSCERGAPGTPGQPGLPGAP
GSPGAPGWKGQRGDVGPPGPAGMKGLPGVPGRPGVDGPPGPPGLPGPIGDDGLPGLPGPK
GSQGLPGFPGFPGERGKPGLEGHPGRKGEPGERGRPGFLGDKGVKGAKGARGPPGDEGEM
AVISLKGKPGEPGPPGDSGFPGAEGDKGNPGMQGRRGEPGRYGPPGFHRGEPGRTGHPGL
PGAPGPPGSPGLRGIIGFPGFPGDQGEPGSPGSPGISGSNGLRGPKGNKGDPASQFGPPG
PEGEPGSPGCPGHLGAPGERGLPGVQGPRGPPGRPGLPGSSGPPGCPGDPGVPGLKGHPG
DMGDPGPRGMMGDPGTPGHPGIKGPSGSPGLNGLHGLKGQKGAKGASGSHEVGPPGPMGI
PGPKGETGDPGSPGISPPGLPGEEGPPGPPGRPGSPGPAGATGRAPEGDIPDPGFPGDQG
PPGPDGPRGAPGPPGPPGSVDLPKGEPGDRGLPGPPGPPGPPGPPGRKGFPGCDGKDGQK
GPIGFPGLQGPPGLPGSPGEKGLPGFPGRQGPPGPPGARGEPGPPADVDSCPRIPGLPGV
PGPRGPEGGMGPPGMRGPPGAGCKGESGPDGRRGEDGLPGSPGPPGSKGDTGEAGCPGAP
GPPGPIGDPGPKGFGPGYLSGFLLVLHSQTDGEPTCPAGMPRLWTGYSLLYLEGQEKAHN
QDLGLPGSCLPMFSTLPFAYCNIHQVCHYARRNDRSYWLASAAPLPMMPLSEEEIRPYIS
RCAVCEAPAQVVALHSQDQSIPPCPRTWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLE
DFRAAPFLECQGRQGTCHFFANEYSFWLTTVRPDLQFSSVPSPDTFKESQAQRQRISRCQ
VCMKYS
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaataaagtactcattcaggtggatcaagccattggccacagatccctggttg
cttatacttatcctgctttctgtacaacacatgtatgcgagtgcaaagaagtttattggg
ccttgcggaggaagagattgctcagtttgccagtgctttcctgaaaaagggtctcggggt
caaccaggactcccagggccacagggtcctattggacccctgggactgccaggacccatt
ggaattccaggagagaaagggatgagaggtgacagcggccctcctggagcagccggtgac
aaaggtgataagggtccaactggtgttcctggatttccaggtttggatggcatacctggg
cacccggggcctcctggatccagaggcaagcctggaatgcatgggtacaatggctcgaga
ggtgatccagggcttccaggagaaagaggagttcctggcccaagaggccccccaggcctt
cctggggaaaatggagaaaaaggaaattctgtgttcattttaggtgccattaaaggaatt
ccgggtgacagaggggacccaggacctcctggcttgccgggatctaggggtgcaagagga
ccagcgggcccaatgggacatccaggagagcctgggttaccaggtgctccaggccatcct
gggagaccaggcttgaagggtaatcctggcgtgggagtgaaggggcaaatgggagaaccg
ggtgaagttggccagcaaggttctcctggacccaccttattggtacagccacctgattct
tgtctgtataaaggagaaaagggcataaaaggaatgcctggtgtaactggacctccagga
ccaccaggacccaagggaaaacctggatttggggccaaaggagagaagggtgttcctggg
ttctcaggaccacggggcgatcctggttcctatgggttgccaggctttccaggattaaag
ggggaaccaggactgtttggagatcctggatcgtttggatttcttggcccaaagggggac
cctggagatcgcgggtacccaggaccaccaggtgttttggtaactccatctcttccgctc
aaaggtcctccaggggatccggggcgccctggccgctatggagaaacggggtctgttgga
ccgcctggtccccctggtccctcaggaccaccaggggaaacctgtgcaggcatgatggga
ccccctgggccaggagggtttcctggtcatccgggatttccaggggcagccggtatcccc
gggagagctgattccactccagggaaaccagggagcccgggaccacctgggttgcctgga
gctccaggactgcagggccctccaggatcagatgttatatattgtagtgtcgggcaccct
ggaccacaaggaataaaaggcaaagcaggtcctccgggaagaagaggctcgaaaggagaa
aaaggaaacgcggggctctgtgcctgtgagcctggtcccatgggcccaccaggccctccg
ggacttcctgggaggcagggtagtaagggagacttggggctccctgggtggcttggagag
aaaggtcatccaggccctccgggtgctgaaggatctccaggaccaccaggaaaacccggt
gctgcaggaccacttggcagtaaaggagaaaagggagacatggttgtgtcaagagtgaaa
gggcagaaaggagaaaggggtcctgatgggctcccaggatttccagggcaacagggacaa
catggccgggatggacttcctggagaaaggggggatccgggacccccgggggatcatgaa
gacgcagccccaggtgcaaaagggtttcctggattgccagggcccccaggaagaacagga
cctaagggacaaccaggactaggatttcccgggccaccaggagaaagagggccaccagga
gctccaggccgtcctggtgagaggggccttgagggcctgaagggtcagaaaggcgataca
atttcttgtaacgtaacctaccctgggaggccagggcctccaggttttgatggagctcca
ggaccaaagggacttccgggccctccgggcgctccagggttgaggtgtttagatgggcca
aagggtcagcgtggcaaaccaggaatatcagaaatacctggtccacctggttttcgtggt
gacataggagatccaggttttggaggtgcaaaggggtcctcccttcctgggcccccaggc
tctcctggttctcgtggagcaaatgggcagaaaggaatcatgggagacactgcctacggc
cacccaggtcccccgggagagagaggtcttgcaggggtgccggggtcaaaaggacacaga
ggtgatccaggacctccaggctttgcagggccggctggtttgcccggattcccaggtctc
aaaggccccagaggcagagagggaagtgctgggtttccagggatcccaggtccaccgggc
cattcctgtgaaagaggcgccccgggaacaccagggcaacccggactccccggggctccg
ggcagtccaggtgccccaggttggaaaggacagcgaggggatgtggggcctcctggtccg
gctggaatgaagggtctccctggagtcccaggacggccaggggtagatgggccccccgga
cccccagggctcccaggccccataggcgatgatggactgcctggtcttccaggcccaaag
ggatcccaggggctgcctggcttcccaggttttccaggggagagaggaaagcctggcctg
gaggggcaccctggccgtaaaggggaaccaggagagaggggtcggcctggcttcctcgga
gacaagggtgtgaaaggcgccaaaggagcaaggggacccccaggagatgaaggagagatg
gctgtaatttccctaaaggggaaacccggggaacctggacctcctggagatagtgggttc
ccaggagcagaaggtgataaaggcaatccggggatgcaggggaggagaggagagccggga
agatacggaccacctggatttcacagaggggagcctggtagaactgggcacccggggctc
cctggagccccaggccctccaggctcacccgggctgagaggcattattggttttccagga
tttccaggtgaccagggtgaaccaggttctccagggtcccctggaatttcaggaagcaat
ggactgagaggccctaaaggaaacaaaggggaccctgctagtcagtttggcccacctggt
cccgagggagaaccaggtagccctggatgtccaggacatcttggagcacctggagagcgg
ggcttgccgggtgttcaagggcccagaggaccacctggaaggccaggactacctggctcc
tccggaccaccaggctgtccaggtgatccaggagtacctgggctgaagggacatccagga
gacatgggggatcctgggccaagaggcatgatgggggacccggggacaccaggtcatccg
ggaataaaaggtccctccgggtcgcctggtctgaatggcttacatggtttaaagggtcag
aaaggagccaaaggcgcttcaggctcgcatgaagtgggcccacctggcccaatgggcata
cctgggccgaaaggggagacaggagaccccgggagcccaggaatttctcccccaggcctt
cctggagaagaaggtccccccggtcccccagggagacctggatcacctggtcctgcaggt
gccacaggaagagctcctgaaggtgacattcctgacccaggtttccccggcgatcaggga
cctcccggccccgatggtccaagaggagcacccgggcccccgggcccccctgggagtgtt
gaccttccgaaaggggaaccaggagaccggggtctgccgggtcccccgggccccccgggc
cccccaggccctccaggacgcaaaggcttcccaggatgtgatggaaaagatggacagaaa
ggaccaattggattcccgggactgcaggggccacctggacttccgggatctcctggggag
aagggtttacctggctttccaggcaggcaagggccccctgggcctccaggtgccagaggt
gaaccggggccacctgcagacgtggattcctgcccccgaatccccgggcttcctggggtg
ccaggcccaagaggaccagaaggaggcatgggcccccccggaatgagaggccccccagga
gcagggtgcaaaggagagtcggggccggatggcaggaggggcgaggatggcctcccaggg
tctcctgggcctcctggaagcaaaggggacacgggagaagcgggctgtcctggagcacca
ggccctcctgggcccattggggatcccgggcccaaagggtttgggcctggatacctcagt
ggcttcctcctggttctccacagtcagacagatggagaacccacctgcccagcgggcatg
cccaggctgtggacgggctacagtctgttgtacctggaaggacaggagaaggctcacaac
caagacttgggtctgccggggtcttgccttcccatgtttagcacactgccctttgcctac
tgtaacatccaccaagtctgccactacgcccggagaaacgaccgatcgtactggctggcc
agcgccgcgcccctgcccatgatgccgctctcggaagaagagatccgcccgtacatcagc
cgctgtgccgtgtgcgaggccccggctcaggtggtggctctgcacagccaggaccagtcc
atccccccgtgtccacggacctggaggagcctctggatcgggtactcgttcctgatgcac
acaggggctggggaccaaggaggagggcaggccctcatgtccccgggcagctgcctggaa
gattttcgagcagcgccgttcctcgagtgccaaggccgccagggaacttgccactttttt
gcaaacgagtatagcttctggctgacaacagtgaggcctgacctgcaattttcctcggtg
ccatcaccagacaccttcaaagaaagccaggcccagcggcagagaatcagcagatgccag
gtctgcatgaaatacagctag
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