KEGG   Acinonyx jubatus (cheetah): 106972823
Entry
106972823         CDS       T04657                                 
Name
(RefSeq) THO complex subunit 2 isoform X6
  KO
K12879  THO complex subunit 2
Organism
aju  Acinonyx jubatus (cheetah)
Pathway
aju03013  Nucleocytoplasmic transport
aju03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106972823
  09122 Translation
   03013 Nucleocytoplasmic transport
    106972823
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aju03019]
    106972823
   03041 Spliceosome [BR:aju03041]
    106972823
Messenger RNA biogenesis [BR:aju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     106972823
Spliceosome [BR:aju03041]
 Complex C
  Other components
   EJC/TREX
    106972823
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106972823
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 106972823
NCBI-ProteinID: XP_026910110
UniProt: A0A6J1YY58
LinkDB
Position
X:complement(98367409..98479672)
AA seq 1629 aa
MAAATVVVPVEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSEKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYVCFEILSQIQKYDNLITP
VVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPID
LAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYF
GQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDT
LVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKS
EKGSKQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPH
TSYEREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRL
KLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLC
YDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRA
TGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPK
VLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNA
VASVQNGPGGGPSSSSIGSASKSDESSTEETDKSRERSQCGVKAVNKASSATPKGNSSNG
NSGSNSSKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARE
TKERTPKSDKEKEKFKKEEKAKDEKFKTTVPSIESKSTQEKEREKEPSRERDIAKEMKSK
ENAKGGEKTPVSGSLKSPVPRSDVAEPEREQKRRKIDTHPSPSHSSTVKLVYFQVTAILP
KVPLGSENYASSPVISIHFLQDSLIELKESSAKLYLNHTPPPLSKSKEREMDKKDLDKSR
ERSREREKKDEKDRKERKRDHSNNDREVPPDLAKRRKEENGTMGVSKHKSESPCESPYPN
EKDKEKNKSKSSGKEKGGDSFKSEKMDKISSGGKKESRHDKEKIEKKEKRDSSGGKEEKK
HHKSSDKHR
NT seq 4890 nt   +upstreamnt  +downstreamnt
atggcggccgcaactgtggtggttcccgtagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgccggatcctcagtgaaaataaaagccatgatagttca
acttacagagatttccagcaagctctttatgagttatcataccatgtcattaaaggaaat
ctaaagcatgaacaggcatctaatgttcttaatgacattagtgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacaattggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcctggatccagaaacattggaatcattagggcttattaaacaa
tcacagcagttcaatcaaaagtcagttaaaatcaagacaaagctcttttataagcagcaa
aaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattactagtgatttaatcttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacatgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaaatgga
gagactccttcatctttatacagagttgcagcagtccttctacaatttaatcttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaaa
cgagaaattgtagaagctaagcaaattgttagaaaacttacgatggttgtattgtcttct
gaaaaaatcgacgagcgagagaaagaaaaggaaaaagaagaggagaaagtagagaagccg
cctgataaccaaaaacttggtttgttggaagccttgttgaagattggtgattggcagcat
gcacagaacattatggatcagatgcctccgtactatgcagcttcacataagctaatagcc
cttgctatttgcaagctcattcacataactatagagcctctctaccgaagagttggcgtt
cctaaaggtgctaaaggctcacctgttaatgctttgcaaaataagagagcaccaaaacaa
gcagagagctttgaagatttgaggagagatgtcttcaatatgttctgttaccttggtcct
cacctttctcacgaccccattttatttgcaaaagtggtgcgcataggcaagtcatttatg
aaagagtttcagtctgatggaagcaaacaagaagataaagagaaaacggaagttatcctt
agctgtttacttagcattactgaccaggtactacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccctatcagcatagg
tatcgtctgtatggccagtggaagaatgaaacttataatagtcacccacttttagtaaaa
gttaaggcccaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat
gtgaagccttctggaagacaaattgggaaattgagccacagcaatccaaccattttgttt
gattatgtatgttttgagatcttatcacaaatacagaagtatgataacttaataacacct
gtagtagattcattgaaatacctgacttcattgaattatgatgttttggcctattgtatc
attgaagctttagctaatccggaaaaggagagaatgaaacatgacgacacaaccatctca
agctggcttcagagtctggctagtttctgtggtgcagtttttcgtaaatatccaattgat
cttgctggtcttcttcaatatgtggctaatcagctaaaggcaggcaaaagttttgacctg
cttatattgaaagaagtggtacaaaaaatggcaggaatagaaataacagaggaaatgacg
atggagcaactagaggccatgactggtggagagcaactaaaagctgagggtggttatttt
ggccagatcagaaacactaaaaaatcctcccagagattaaaagatgcactattggaccat
gatcttgctcttcctctctgtttgcttatggctcagcagaggaatggggtaatcttccag
gaaggtggagagaaacatttgaaacttgtgggaaaactctatgatcagtgtcatgatacc
ctggtacagtttggtgggtttttagcatctaatctaagcacagaagattatataaagcga
gtgccttcaattgatgtgctctgtaatgaatttcatacaccccatgatgcagcatttttc
ctgtctaggccaatgtatgcacaccacatttcgtcaaagtatgatgaacttaaaaaatca
gaaaaaggaagtaaacagcaacataaagttcacaagtacattacatcgtgtgaaatggtg
atggctcctgtccatgaagcagtggtctccttacatgtttccaaagtctgggatgacatc
agccctcaattctatgccacattctggtcattgacaatgtatgaccttgcagttccacac
accagctatgaacgggaagtcaataaacttaaagtccagatgaaagcaattgatgacaat
caggaaatgcctccaaataaaaagaaaaaggagaaggagcgttgtactgcccttcaggac
aagcttcttgaagaagaaaagaaacagatggaacatgtacagcgagttctacagagactg
aaactggagaaggacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaa
tttctacagctgtgtatatttcctcgatgtattttttcagcaattgatgctgtttactgt
gctcgttttgttgaattggtacatcaacagaaaactccaaatttttccacacttctttgc
tatgatcgagttttctctgatataatttacacagttgcaagctgtactgaaaatgaagct
agtcgatatgggcgatttctttgctgcatgttagagactgtgaccaggtggcacagtgat
cgcgccacatatgaaaaggaatgtggaaattatccaggattccttactatattacgagca
actggatttgatggtggaaataaagctgatcaattagactatgaaaactttcgacatgtt
gtgcataaatggcattacaaactaaccaaggcatcggtacattgccttgaaacaggcgaa
tatactcacatcaggaatattttgattgtgctaacaaaaatacttccttggtacccaaaa
gttttgaatctgggtcaggctttggaaagaagagtgcataaaatctgccaagaagaaaaa
gagaagaggccagatctatatgcattggctatgggctactctgggcagttgaaaagtaga
aagtcatacatgatacctgaaaatgagtttcatcacaaagacccccctccgaggaatgca
gttgccagtgtacaaaatgggcctggtggtgggccttcttcttcgtcgataggaagtgca
tccaaatcggacgaaagcagtactgaggagactgataaatcaagggagagatctcagtgt
ggtgtgaaagctgttaataaagcttctagtgccacaccaaaagggaattcaagcaatgga
aacagtggctctaacagcagcaaagctgttaaagaaaatgacaaagaaaaagggaaagag
aaagaaaaagagaaaaaagaaaagactccagctactactccagaggccagggtacttggt
aaagatggtaaagaaaaaccgaaggaagagcggccaaataaagatgaaaaagcaagagag
acgaaggaaagaacacctaagtctgacaaagagaaagaaaaattcaagaaggaagaaaaa
gctaaagatgagaaattcaaaaccactgtccccagcatagaatcaaaatcgactcaagaa
aaggaaagagagaaggagccatccagagaaagagatatagcaaaggaaatgaaatcaaag
gaaaatgctaaaggaggagaaaaaacaccagtttctgggtccttgaagtcacctgttccc
cgatcagatgttgcagagcctgaaagggaacaaaaacgccgcaaaattgatacccaccct
tctccatcgcattcctcaacagtaaagctggtttatttccaggttacagccatacttccc
aaagttcctctgggttctgagaactatgccagctcacctgtcatctccattcattttcta
caggacagtctcatcgaactcaaggagtcttcagcaaagctctaccttaatcatactcct
ccaccactgtccaagagtaaggagagagagatggacaagaaagatttggacaagtcgagg
gaaagatccagagaaagagagaaaaaagatgaaaaggacaggaaagaacggaaaagggat
cattcaaacaatgaccgtgaagtgccaccggacttagccaagaggcgaaaagaggaaaat
ggaacaatgggggtttcaaaacacaaaagtgaaagtccatgtgagtctccttatccaaat
gagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaaggcggcgattcg
tttaaatctgaaaagatggataaaatctcctccggtggcaaaaaggagtccaggcatgat
aaagaaaagatagaaaagaaagagaaacgggacagttcaggaggaaaggaagagaagaaa
catcataagtcctcggacaagcacagataa

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