Acinonyx jubatus (cheetah): 106972823
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Entry
106972823 CDS
T04657
Name
(RefSeq) THO complex subunit 2 isoform X6
KO
K12879
THO complex subunit 2
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju03013
Nucleocytoplasmic transport
aju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106972823
09122 Translation
03013 Nucleocytoplasmic transport
106972823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aju03019
]
106972823
03041 Spliceosome [BR:
aju03041
]
106972823
Messenger RNA biogenesis [BR:
aju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106972823
Spliceosome [BR:
aju03041
]
Complex C
Other components
EJC/TREX
106972823
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106972823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
106972823
NCBI-ProteinID:
XP_026910110
UniProt:
A0A6J1YY58
LinkDB
All DBs
Position
X:complement(98367409..98479672)
Genome browser
AA seq
1629 aa
AA seq
DB search
MAAATVVVPVEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSEKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYVCFEILSQIQKYDNLITP
VVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPID
LAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYF
GQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDT
LVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKS
EKGSKQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPH
TSYEREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRL
KLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLC
YDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRA
TGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPK
VLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNA
VASVQNGPGGGPSSSSIGSASKSDESSTEETDKSRERSQCGVKAVNKASSATPKGNSSNG
NSGSNSSKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARE
TKERTPKSDKEKEKFKKEEKAKDEKFKTTVPSIESKSTQEKEREKEPSRERDIAKEMKSK
ENAKGGEKTPVSGSLKSPVPRSDVAEPEREQKRRKIDTHPSPSHSSTVKLVYFQVTAILP
KVPLGSENYASSPVISIHFLQDSLIELKESSAKLYLNHTPPPLSKSKEREMDKKDLDKSR
ERSREREKKDEKDRKERKRDHSNNDREVPPDLAKRRKEENGTMGVSKHKSESPCESPYPN
EKDKEKNKSKSSGKEKGGDSFKSEKMDKISSGGKKESRHDKEKIEKKEKRDSSGGKEEKK
HHKSSDKHR
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaactgtggtggttcccgtagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgccggatcctcagtgaaaataaaagccatgatagttca
acttacagagatttccagcaagctctttatgagttatcataccatgtcattaaaggaaat
ctaaagcatgaacaggcatctaatgttcttaatgacattagtgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacaattggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcctggatccagaaacattggaatcattagggcttattaaacaa
tcacagcagttcaatcaaaagtcagttaaaatcaagacaaagctcttttataagcagcaa
aaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattactagtgatttaatcttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacatgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaaatgga
gagactccttcatctttatacagagttgcagcagtccttctacaatttaatcttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaaa
cgagaaattgtagaagctaagcaaattgttagaaaacttacgatggttgtattgtcttct
gaaaaaatcgacgagcgagagaaagaaaaggaaaaagaagaggagaaagtagagaagccg
cctgataaccaaaaacttggtttgttggaagccttgttgaagattggtgattggcagcat
gcacagaacattatggatcagatgcctccgtactatgcagcttcacataagctaatagcc
cttgctatttgcaagctcattcacataactatagagcctctctaccgaagagttggcgtt
cctaaaggtgctaaaggctcacctgttaatgctttgcaaaataagagagcaccaaaacaa
gcagagagctttgaagatttgaggagagatgtcttcaatatgttctgttaccttggtcct
cacctttctcacgaccccattttatttgcaaaagtggtgcgcataggcaagtcatttatg
aaagagtttcagtctgatggaagcaaacaagaagataaagagaaaacggaagttatcctt
agctgtttacttagcattactgaccaggtactacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccctatcagcatagg
tatcgtctgtatggccagtggaagaatgaaacttataatagtcacccacttttagtaaaa
gttaaggcccaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat
gtgaagccttctggaagacaaattgggaaattgagccacagcaatccaaccattttgttt
gattatgtatgttttgagatcttatcacaaatacagaagtatgataacttaataacacct
gtagtagattcattgaaatacctgacttcattgaattatgatgttttggcctattgtatc
attgaagctttagctaatccggaaaaggagagaatgaaacatgacgacacaaccatctca
agctggcttcagagtctggctagtttctgtggtgcagtttttcgtaaatatccaattgat
cttgctggtcttcttcaatatgtggctaatcagctaaaggcaggcaaaagttttgacctg
cttatattgaaagaagtggtacaaaaaatggcaggaatagaaataacagaggaaatgacg
atggagcaactagaggccatgactggtggagagcaactaaaagctgagggtggttatttt
ggccagatcagaaacactaaaaaatcctcccagagattaaaagatgcactattggaccat
gatcttgctcttcctctctgtttgcttatggctcagcagaggaatggggtaatcttccag
gaaggtggagagaaacatttgaaacttgtgggaaaactctatgatcagtgtcatgatacc
ctggtacagtttggtgggtttttagcatctaatctaagcacagaagattatataaagcga
gtgccttcaattgatgtgctctgtaatgaatttcatacaccccatgatgcagcatttttc
ctgtctaggccaatgtatgcacaccacatttcgtcaaagtatgatgaacttaaaaaatca
gaaaaaggaagtaaacagcaacataaagttcacaagtacattacatcgtgtgaaatggtg
atggctcctgtccatgaagcagtggtctccttacatgtttccaaagtctgggatgacatc
agccctcaattctatgccacattctggtcattgacaatgtatgaccttgcagttccacac
accagctatgaacgggaagtcaataaacttaaagtccagatgaaagcaattgatgacaat
caggaaatgcctccaaataaaaagaaaaaggagaaggagcgttgtactgcccttcaggac
aagcttcttgaagaagaaaagaaacagatggaacatgtacagcgagttctacagagactg
aaactggagaaggacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaa
tttctacagctgtgtatatttcctcgatgtattttttcagcaattgatgctgtttactgt
gctcgttttgttgaattggtacatcaacagaaaactccaaatttttccacacttctttgc
tatgatcgagttttctctgatataatttacacagttgcaagctgtactgaaaatgaagct
agtcgatatgggcgatttctttgctgcatgttagagactgtgaccaggtggcacagtgat
cgcgccacatatgaaaaggaatgtggaaattatccaggattccttactatattacgagca
actggatttgatggtggaaataaagctgatcaattagactatgaaaactttcgacatgtt
gtgcataaatggcattacaaactaaccaaggcatcggtacattgccttgaaacaggcgaa
tatactcacatcaggaatattttgattgtgctaacaaaaatacttccttggtacccaaaa
gttttgaatctgggtcaggctttggaaagaagagtgcataaaatctgccaagaagaaaaa
gagaagaggccagatctatatgcattggctatgggctactctgggcagttgaaaagtaga
aagtcatacatgatacctgaaaatgagtttcatcacaaagacccccctccgaggaatgca
gttgccagtgtacaaaatgggcctggtggtgggccttcttcttcgtcgataggaagtgca
tccaaatcggacgaaagcagtactgaggagactgataaatcaagggagagatctcagtgt
ggtgtgaaagctgttaataaagcttctagtgccacaccaaaagggaattcaagcaatgga
aacagtggctctaacagcagcaaagctgttaaagaaaatgacaaagaaaaagggaaagag
aaagaaaaagagaaaaaagaaaagactccagctactactccagaggccagggtacttggt
aaagatggtaaagaaaaaccgaaggaagagcggccaaataaagatgaaaaagcaagagag
acgaaggaaagaacacctaagtctgacaaagagaaagaaaaattcaagaaggaagaaaaa
gctaaagatgagaaattcaaaaccactgtccccagcatagaatcaaaatcgactcaagaa
aaggaaagagagaaggagccatccagagaaagagatatagcaaaggaaatgaaatcaaag
gaaaatgctaaaggaggagaaaaaacaccagtttctgggtccttgaagtcacctgttccc
cgatcagatgttgcagagcctgaaagggaacaaaaacgccgcaaaattgatacccaccct
tctccatcgcattcctcaacagtaaagctggtttatttccaggttacagccatacttccc
aaagttcctctgggttctgagaactatgccagctcacctgtcatctccattcattttcta
caggacagtctcatcgaactcaaggagtcttcagcaaagctctaccttaatcatactcct
ccaccactgtccaagagtaaggagagagagatggacaagaaagatttggacaagtcgagg
gaaagatccagagaaagagagaaaaaagatgaaaaggacaggaaagaacggaaaagggat
cattcaaacaatgaccgtgaagtgccaccggacttagccaagaggcgaaaagaggaaaat
ggaacaatgggggtttcaaaacacaaaagtgaaagtccatgtgagtctccttatccaaat
gagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaaggcggcgattcg
tttaaatctgaaaagatggataaaatctcctccggtggcaaaaaggagtccaggcatgat
aaagaaaagatagaaaagaaagagaaacgggacagttcaggaggaaaggaagagaagaaa
catcataagtcctcggacaagcacagataa
DBGET
integrated database retrieval system