Acinonyx jubatus (cheetah): 106973992
Help
Entry
106973992 CDS
T04657
Name
(RefSeq) LOW QUALITY PROTEIN: spliceosome RNA helicase DDX39B-like
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju03013
Nucleocytoplasmic transport
aju03015
mRNA surveillance pathway
aju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106973992
09122 Translation
03013 Nucleocytoplasmic transport
106973992
03015 mRNA surveillance pathway
106973992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aju03019
]
106973992
03041 Spliceosome [BR:
aju03041
]
106973992
Enzymes [BR:
aju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106973992
Messenger RNA biogenesis [BR:
aju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106973992
Spliceosome [BR:
aju03041
]
Complex C
Other components
EJC/TREX
106973992
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106973992
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106973992
NCBI-ProteinID:
XP_053077902
UniProt:
A0ABM3Q1U5
LinkDB
All DBs
Position
B2:complement(105160904..105162435)
Genome browser
AA seq
426 aa
AA seq
DB search
MAENDVDNELLDYEDEVETAAGGDGAEAPAKKDVKDSYVSIHSSGFRDFLLKPELLWPIV
DCVFEHPSEVQHECVPQAILGMAVLCQAKSGMGKTAVFVLDTLQQPEPVTGQVSVLVMCH
TRELALQISKEYERFSKYMPNVKVAVFFGGLSXKDEEVLKKNCLHIIVGTPGRILALARN
KSLSLKHIKHFILDECDKMLEQLDMHRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCHKF
MQDPMEIFVDDETKLTLHGLQQYYVKLKDNEENRKLFDLLDVLEFNQVVIFVKSVQRCIA
LAQLLVEQNFPAIAIHRGMPQEERLSQYQRFKDFQRRILVATNLFGRGMDIGRVNIAFNS
DMPEDSDTYLHQVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELTDETDISS
YIEQTR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaacgatgtggacaatgagctcttggactatgaagatgaggtggagacagca
gcagggggagacggggctgaggcccctgccaagaaggatgtcaaggactcctatgtctcc
atccacagctctggctttcgtgacttcctactgaagccagagttgctctggcccattgtt
gactgtgtctttgagcatccatcagaagtccagcatgagtgcgtccctcaggccattttg
ggaatggccgttctatgccaggccaagtcaggcatgggaaagacagcagtgtttgtgctg
gacacactgcaacagccagagccagttactggacaggtgtctgtgctggtgatgtgtcac
actcgggagttggctcttcagatcagtaaggagtacgagcgcttctctaaatacatgccc
aatgtcaaggtcgcggtgttttttggtggtctatcgnagaaggatgaagaggtgctgaag
aagaactgcttgcatatcatcgtggggacccctggccgcatcctagccttggctcgaaat
aagagcctcagtctcaaacacattaaacactttatcttggatgaatgtgataagatgctt
gaacagctcgacatgcatcgggacgtccaggaaatttttcgcatgaccccccatgagaag
caggtcatgatgttcagtgctaccttgagcaaagaaatccgtccagtctgccacaagttc
atgcaagacccaatggagatcttcgtggatgatgagacgaagctgacgctgcatgggttg
cagcagtactatgtgaaactgaaggacaacgaggagaaccggaagctctttgaccttctc
gatgtccttgagttcaatcaggtggtgatctttgtgaagtctgtgcagcgttgcattgcc
ctggcccagcttctagtggagcagaacttcccagccattgccatccaccgagggatgccc
caggaggagaggctttctcagtatcagcggtttaaagattttcaacgacgaattcttgtg
gccaccaacctatttggccgaggcatggacattggacgggtgaacattgcctttaactct
gacatgcctgaggattctgacacctacctgcatcaggtggcccgagcaggccggtttggc
accaagggcttggccatcacgtttgtgtcagatgaaaacgacgccaagatcctcaatgac
gtgcaggatcgctttgaagtcaatattagtgagctgacagatgagacagacatttcctcc
tacattgaacagacacggtag
DBGET
integrated database retrieval system
