Acinonyx jubatus (cheetah): 106975583
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Entry
106975583 CDS
T04657
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
aju
Acinonyx jubatus (cheetah)
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aju03037
]
106975583
Cilium and associated proteins [BR:
aju03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106975583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
ATG16
Mis12
Motif
Other DBs
NCBI-GeneID:
106975583
NCBI-ProteinID:
XP_026916084
UniProt:
A0A6J1ZHF3
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All DBs
Position
C1:11896234..11946154
Genome browser
AA seq
2018 aa
AA seq
DB search
MSLGLEESVEAQLALETVIQTLESSVLRAGREKGLSEQDPAQDSQLACLPARIREIITRN
LSQPENQAPLPAAEMASVLSLQEENQLLQQELSRVEDLLAQSRAERDELAIKYNAVSERL
EQAVRLESGEPETQEPTGLVRQSVELRRQLQEEQASYRRKLQAYQEGQQRQAQLVQRLQA
KTLQYKKKCSELEQQLLERSTELERQRLRDTEHSHDLESALIRLEEEQQRSSSLAQVNSM
LREQLDQANSANQALSEDIRKVTSDWTRSRKELEQREAAWRREEESFNTYISNEHSRLLL
LWRQVVGLRRLVSEVKMSTERDLLQLGGELARTSRAIQEADLGLSAGLQLAESRAEAALE
KQTLLQAQLEEQLRDKVLQEKDLAQLQVQSNLDKANLSARVTELALTVERLQNQNLEKDR
VNKALTEKLEALESLRLQEQAALETEDGEGLQQTLRDLAQAVLSDMESGVQLSGSERTGD
ASDGSLRGLSGPRTPSPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSALHKRQLQVQDM
RGRYEASQDLLGTLRKQLSDSEGERRSLEEQLQRLRDKTNGATQAHEDAQREAQRLRGTI
DLLNREKDSLARSLQAAQQQAEELRQEREKLQAAQEELRRQRDRLEEEREDTARDSERTR
RELERSHRQLEQLEMKRSGLAKELVEVREALSCATLQRDMLQAEKAEVAEALTKAEAGRV
ELELSMTKLRVEEASLRDSLSKLSALNESLAQDKLGLNRLVAQLEEEKAALLGRQRQVEQ
EACLAREAQERLEHLRLEQEVEQQGLEGSLRVAEQAREALEHQLPTLHQERCRLQEQLAQ
LSRQLSGREQELEQARRETQRQVEALERAAREKEALAKERAGLAVQLAAAERESRTLSEE
ATRLRLEKEALESSLFEVQRQLAQLEARREQLEADGQALLLAKETLTGELVGLRQQMTTT
EEKVALDKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQG
QMHREREELLARLEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKL
MGTQHSLAAVSLDLERHKRDAQSRQEQDRSTVNALTSELRDLRAQLEEAAAAHAQEAKRL
QEQARNLDRQRESSMREAEELRTQLRLLEDARDGLRRELLEAQRKVRDSQDGREAQRQEA
SELRRSLGEGVKEREALRRSNEELRAAVKKAESERISLKLANEDREQKLVLLTEARVAAG
REAEELRAGLQDVERSRLEARRELQELRRQMKVLDGENTRLGRELVELQGRLALGERAEK
EGRREALGLRQKLLKGEASLEAIRQELQGAQRKLQEQEGEFRARERGLLASLEEARGAEK
LQLDHARSLELRLEAVRAEAAELGLRLSAAEGRAQGLEAELARVEAQRRAAETQLGGLRS
ALRRGLGLGRTPSPAPLPSPGSPARGAPAGGSGEGLSSPSPLERSPGSEPPSPGPATSPA
SPDLDPEAVRGALREFLQELRSAQRQRDELQAQTGVLSRQLAEMEAERDSATSRARQLQK
AVADGAEARRRVDGRLSGAQAELVLQEENVRRSERERRAALDQVAALERSLQATESELRA
SQEKLSKMKANEVKLESDKRRLKEVLDASESRTIKLELQRRSLEGELQRSRLGLSDREAQ
AQALQDRVDSLQRQVADSEVKAGTLQLTVERLNGALAKMEESEGALRDKAQGLSEALAQS
SANLTSTQDKNLHLQKALTACEHDRQVLQERLEAARQTLSEARKQSGSLSEQVQTMRGEL
ADLEVQRAEAEGQLQQLQEVLRQRQEGEAAALNAVQKLQEERRLLQERLDGLQRALAQLE
AEKREVERSALRLEKDRVALKRMLDKVEREKLRSHEDTVRLSAEKGRLDRTLTGAELELA
EAQRQIQLLEAQVVALEQDQSPARLEAAEQQQREVEREVERLRSAQVQTARTLEARERAH
RQRVRGLEEQVSTLKGQLQQELRRSSASFPQTSGPPGE
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atgagcttggggctggaggaatcggtggaggcccagctggcactggagacggttatccag
accctggagagcagcgtcctgagggcaggccgggagaagggcctgagcgagcaggaccct
gcccaggactctcagctcgcctgcctacctgcccgcatcagggagatcatcacccgcaac
ctctcccagcctgagaaccaagccccgctgccggccgcggagatggcatcagtgctgtcg
ctgcaggaggaaaaccagctgctgcagcaggaactgtcccgcgtggaggacctgctggcc
cagagccgggcggagcgtgacgagctggccatcaagtacaacgcggtcagcgagaggctg
gagcaggctgtgcggctggagtctggggagccagaaacgcaggagcccacggggctggtc
cggcagagcgtggagctgcggaggcagctgcaggaggagcaggcctcctaccggcgcaag
ctgcaggcctaccaggaaggccagcagcggcaggcccagcttgtgcagcggctgcaggcc
aagaccctgcagtacaagaagaagtgctcggagctggagcaacagcttctagagagatct
acagagctggagcggcagcggctgagggacacagagcacagccatgacctggagagcgcc
ctcatccgcctagaggaggagcagcagaggagttccagcctggcccaggtgaactccatg
ctccgagagcagctggaccaggcgaactcggccaaccaggctctgagtgaggacatccgc
aaggtgacttctgactggacacgcagccgtaaggagctggagcagcgggaggcggcgtgg
aggcgtgaggaggagtccttcaacacctacatcagcaacgagcacagccgcctgctcctc
ctctggaggcaggttgtggggctccgtcggctggtcagcgaggtgaagatgtccaccgag
agggacctgctgcagctgggaggggagctggcccggacctcaagggccatccaggaggcg
gacctggggctgagcgcaggcctgcagctggccgagagccgggcagaggcggccctggag
aagcagacactgctacaggcccagctggaggagcagctgcgggacaaggtgctccaggag
aaggacctggcccagctgcaggtgcagagcaacctggacaaggccaacctcagtgccaga
gtgacagagctggccctgacagtggagcgccttcagaaccagaatctggagaaggatcgg
gtcaacaaggcccttactgagaagcttgaggccctggaatccctgcggctccaggagcag
gcggccctggagacagaggacggagaggggctgcagcagaccctgagagacctggcacag
gccgtcctgtcggacatggagagcggtgtccagctaagcggctctgagcgcacgggggac
gcgtcggacggcagcctgcgggggctctcgggcccccggaccccctccccgccgcgacgc
tcctcgcccggccgcggccgatccccgcgccgaggcccatccccggcctgctccgactcc
tccacgctcgccctgatccactcggccctgcacaagcgccagctgcaggtccaggacatg
cgtgggcgctatgaggccagccaggacctcctgggcaccctgcggaagcagcttagtgac
agcgagggtgagcgccgcagcctagaggaacagctgcagcgtcttcgggacaagaccaac
ggggccacccaggctcatgaggatgcccagcgtgaggcccagcgtctgcggggcaccatt
gaccttctgaacagggagaaggacagcctggcccgcagcctgcaggcggcccagcagcag
gccgaggagctacggcaggagcgagagaagctgcaggcggctcaggaggagctgcggcgc
cagcgggaccggctggaggaagagcgggaggacacggcgcgggacagcgagcggactcgc
agggagctcgagcgcagccacagacagctagagcagctggaaatgaagcgctcagggctg
gcgaaggagctggtggaggtgagggaggcgctgagctgtgccacgctgcagagggacatg
ctacaggctgagaaggccgaggtggctgaggcgctgaccaaggctgaggccggccgcgtg
gagctcgaactctcaatgaccaagctgagggtcgaggaggcctctctgcgggactccttg
tccaagctgagcgccctcaacgagagcctcgcccaggacaagctgggtctgaaccgcctc
gtcgcccagctggaagaggaaaaggcggccctgctgggccggcaacggcaggtggagcag
gaggcctgcttggcacgggaggcgcaggaacggctggagcacctacggttggagcaggag
gtggaacagcagggcctggagggctccctgcgggtggccgagcaggcccgggaggccctg
gagcaccagctccccacgttgcaccaggagcgctgccggctgcaggagcagctggcccag
ctctcccggcagctgagcgggcgcgagcaggagctggaacaggcacggagggagacgcag
cggcaggtggaggcgctggagcgggcagcccgggagaaggaggctctggccaaagagcgg
gccggcctggcggtgcagctggccgcagctgagcgagaaagccggaccctgtcggaggag
gccacacgcttgcgcctggagaaggaagccctggagagtagcctgtttgaggtgcagcgg
cagttggcgcagctcgaggcccgccgggagcagctggaagccgacgggcaggccctgctg
ctggccaaggagaccctgactggggagctggtgggcctacggcaacagatgacaactaca
gaggagaaggtggctctggacaaggagctgatggcccagaagctggtgcaggctgagcgg
gaggcccaggcctctctgcgggagcagcgggccgcccatgaggaggacttgcaacgactc
cagcgagagaaggaggcagcgtggcgggagctggaggccgagcgggcccagctgcagggt
cagatgcaccgggagcgagaggagctgttggcacggctggaggcagagaaggaagagctg
agcgaggagatcgccgccctgcagcaggagcgtgatgagggcctcctcctggccgagagc
gagaagcagcaggccctgtccctgaaggaatccgagaagacggcgctgtcggagaagctg
atgggtacacagcacagcctggccgccgtctccctggatttggagcggcacaagagagac
gcccagagccggcaggagcaggaccggagcactgtgaacgcactgacgtccgagctgcgg
gacctacgggcccagcttgaggaggctgctgcagcccacgcccaggaggccaagaggctg
caagaacaggcccgaaacctggacaggcagcgggagtcctccatgcgcgaggcagaagag
cttcggacgcagctgcgcctgctggaggacgcccgtgacgggttgcggcgggagctgctg
gaggcccagcgcaaggtgcgcgacagtcaggatggccgtgaggcccagcgccaggaggcc
agcgagctgcggcgcagcctgggtgagggcgtcaaggagcgcgaggccctgcggcgttcc
aacgaggagctgcgggcggccgtgaagaaggctgagagcgaacggatcagcttgaagctt
gccaatgaggacagggagcagaagctggtgctcctcacggaggcacgggtggccgcgggc
agggaggccgaggagctgcgggccggactgcaggacgtggagcgctcgcggctggaggcc
cgccgggaacttcaggagctccggcggcagatgaaggtgctggacggtgagaacaccagg
ctgggccgggagctggtggagctgcagggccgcctggccctgggcgagcgggcagaaaag
gagggccggcgggaggccctgggcctccgacagaagctgctgaagggcgaggccagcctg
gaggccattcggcaggagctccagggagcccagaggaagctgcaggaacaagagggcgag
ttcagggcccgcgagcgaggcctgctggcctccctggaggaggcacgaggcgccgagaag
ctgcagctggaccacgcccgcagcttggagctgaggctggaggcggtgcgggccgaagcc
gcggagttggggctgcggctgagcgcggccgagggccgggcgcaagggctggaggccgag
ctggcccgcgtggaggcgcagcggcgcgcagccgagacccagctgggcggcctgcgctca
gctctgcgtcggggcctgggcctcgggcgcactcccagcccggccccgctgccctcgccg
ggctcgccggcccggggcgcgcccgctggaggaagcggcgaagggctcagcagccccagc
cccttggaacgcagccctgggtccgagccaccatccccaggacctgccacctccccggca
tccccagacctggacccggaggcggtacggggggccctccgggagttcctgcaggagctg
cggagtgcccagaggcagcgggatgagcttcaggcccagaccggtgtcctgagtcgacag
ctggctgagatggaggctgagagggacagtgccacctcacgggcgaggcagctgcagaag
gctgtggccgacggtgcagaagcccgacgccgtgtggacgggcggctgagcggggcccag
gcagagctggtgctgcaggaggagaatgtgcggcgcagcgagcgggagcgccgggccgcc
ctggaccaggtggccgccctggagaggagcctgcaggccaccgagagtgagctccgggcc
agccaggagaagctcagcaagatgaaggccaatgaggtgaagctggagagtgacaagcgg
cgtctgaaggaggtgttggatgcctctgagagccgcaccatcaagcttgagctgcagcgg
cgctcgctcgagggggaactgcagcgcagccgcctgggcctcagtgaccgtgaggcccag
gcccaggccctccaggatcgggtggactccctgcagagacaggtggcagacagtgaggtg
aaggcggggactctgcagctgacagtggagcggctgaacggggccctggccaagatggaa
gagagcgagggggccttgcgggacaaggcgcagggcctgtcagaagcactggcccagagt
agcgccaaccttaccagcacccaggacaagaatctgcacctgcagaaggccctgaccgct
tgtgaacatgaccgccaagttctccaagaacggctggaggccgctcggcagacgttatcg
gaggcccggaagcagagcggctccctgagtgagcaggtgcagacgatgcgaggcgagctg
gcggacctggaagtgcagcgggcagaggcagagggccagctgcaacagcttcaggaggtg
ctgcggcagcgacaggagggggaggcagcggccctgaacgcggtccagaagctgcaggag
gagcggcggctgctccaggagcgcctggacggcctgcagcgagccctcgctcagctggag
gccgagaagcgggaggtggagcggtcagcgctgcggctggagaaggaccgggtggccctc
aagaggatgctggacaaggtggagcgcgagaagcttcgcagccatgaggacacggtgcgg
ctgagcgccgagaagggccgcctggaccgcacgctcacgggggccgagctggagctggct
gaggcccagaggcagatccagctgctggaggcccaggtggtggcactggagcaggaccag
agcccggcccggctggaggccgcggagcagcagcagcgggaggtagagcgggaggtggag
cgcctgcgcagtgcccaggtgcagacagcgcgcaccctggaggctcgggagcgggcccac
cggcagcgcgtgcgcggtttggaagagcaggtgtccacactgaagggacagttgcagcag
gagctccggaggagctcagcatccttcccccaaacctccggccccccaggggaatga
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