Acinonyx jubatus (cheetah): 106977904
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Entry
106977904 CDS
T04657
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106977904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aju03019
]
106977904
Messenger RNA biogenesis [BR:
aju03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106977904
mRNA degradation factors
5'-3' decay
Decapping complex
106977904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
106977904
NCBI-ProteinID:
XP_026901594
UniProt:
A0A6J1YAI0
LinkDB
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Position
D1:11305205..11337144
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AA seq
770 aa
AA seq
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MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PAAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLTQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
VIGSPPVRAVPIGTPPKQMAVPSFSQQILCPKPVHVRPPMPPRYPAPYSERASPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLPPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQVLPPAPGFRAFFSAAPPAPPPPQQHTPGPGPHLQNLRSQAPMFRPDTTHLHPQ
HRRLLHQRQQQNRNQHRSLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMMQ
LQSTDPYLDDFYYQNYFEKLEKLSAAEEVQGEGPKKERTKLITPQVAKLEHAYKPVQFEG
SLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYE
RRYLLSLEEERPALADERKHKICCMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARI
LPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQLM
NLPQSAAAPAPSNPHLAAVLQNKFGLSLLLVILSRGEDLQSSEPATESTQNNQWTEVMFM
ATRELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttagaggattgtcctctggacgaagatgaagatgcctttcag
ggcttgggagaggaagatgaagagattgatcaattcaatgatgatacgtttgggtcaggt
gcagttgatgatgactggcaggaagcacatgagcgcctggctgaactggaagagaagctc
ccagcagcagttaatgaacaaacgggcaatggagaaagggatgagatggacttgctgggt
gaccatgaggagaatctggcagaaaggctcagtaagatggtgattgagaatgagctagaa
gatccagctatcatgagggcagtgcagaccagaccagtcctgcaaccccaaccagggagt
ctcaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccactgcta
actcaggaaatgcctacagtgtctgtattagaatatgccctgcctcagaggcccccacag
ggcccagaagatgatcgggacctttctgagcgtgctttgccgcggcggtccacgtcacct
gtcatcgggagccctcctgttagagccgtccccataggcaccccacctaagcagatggct
gtacccagcttcagccaacagatcctgtgtccgaagcctgtccatgtccggcccccaatg
ccaccgcgctatcctgctccctacagtgagagggcgtccccaaaccagctctgcagtgtc
ccgaactcttccctgctgggtcaccctttccctcctagtgttcctcctgtcctcagcccc
ctccagagagcacagcttctgggaggagcacagctgccgcctggacggatgtctcccagc
cagtttgcacgggttcctggatttgttggtagcccgcttgccgccatgaatcccaagttg
ctgcaagggcgagtggggcaggtgctgcccccagcgccgggcttccgtgccttctttagt
gctgcaccccccgccccaccgcctccccaacagcacacccccggcccagggcctcacctg
caaaacctaaggtctcaggccccgatgtttagaccagacacaactcacctccatccccag
caccgtcggctcttgcatcagaggcagcagcagaacagaaatcagcatcggagtcttaat
ggtgcgggagatcgaggaagtcaccggagcagccatcaggaccatctccgaaaggacccc
tacgccaacctcatgttgcagcgagagaaagactgggtctctaaaatccagatgatgcag
ctacagagcactgacccctacctggacgatttttattaccagaattactttgaaaaactg
gagaaactgtcagctgctgaagaagtgcaaggtgaaggccctaaaaaggagcgaaccaag
ctcattacccctcaggtggccaaactggagcacgcctataagccagtgcagtttgagggc
tctctgggaaagctcactgtctctagtgtgaataatccccgaaagatgatcgatgctgtt
gtgacatctcggagtgaggatgacgagacgaaagaaaaacaggttcgggacaagagacga
aaaaccttggtcataattgagaaaacctatagtttactccttgatgtggaggattatgaa
aggcggtatctcctaagtctagaagaagagcgacctgccctggcggatgaaagaaagcac
aaaatttgttgcatgtatgacaacttaagggggaaattgcctggacaagagaggccaagt
gatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggttgcccgtatt
cttcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaatctc
cctttccttatcaagaaggatgcccaagatgaggtgctgccatgcttactgagtcccttc
tccctcctgctctatcaccttccatcagtgacggtcaccagccttctgcaacagctaatg
aacctacctcagagcgcagccgcgccagcgccctctaaccctcacctcgctgctgtgctc
cagaacaagtttggcctgtcactgctcctcgtcatcctgagccgtggggaagacctacag
agttcagagcctgctacagaatccacacagaacaaccagtggacagaggtgatgttcatg
gcgacccgagaactcctgcggattccccaagcagccctggccaagccaatctcaataccg
acaaacctggtatccctcttttctcgctatgttgaccgacagaaactgaacttgctggaa
acaaagctgcagctagttcaggggatacgataa
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