Acinonyx jubatus (cheetah): 106978831
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Entry
106978831 CDS
T04657
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju05016
Huntington disease
aju05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
106978831
05022 Pathways of neurodegeneration - multiple diseases
106978831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aju03019
]
106978831
04131 Membrane trafficking [BR:
aju04131
]
106978831
03029 Mitochondrial biogenesis [BR:
aju03029
]
106978831
Messenger RNA biogenesis [BR:
aju03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106978831
Membrane trafficking [BR:
aju04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
106978831
Mitochondrial biogenesis [BR:
aju03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
106978831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_2
HEAT_EF3_N
Death_3
Rad26-like_helical_rpts
Motif
Other DBs
NCBI-GeneID:
106978831
NCBI-ProteinID:
XP_026926824
UniProt:
A0A6J2AE63
LinkDB
All DBs
Position
B1:complement(199392912..199538895)
Genome browser
AA seq
3134 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQQQQPQPPPPPPQPPQPLPQAQPPLPQPQPPPPPPPP
PPPGPAVAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSLRNSPEFQKLLGIAMELFL
LCSDDAESDVRMVADECLNRVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRFAEL
AHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAVPKIMASFGNFANDNEIKVLLK
AFIANLKSSSPTIRRTAAGSAVTICQHSRRTQYFYSWLLNVLLGLLVPVEDEHSTLLILG
VLLTLRYLVPLLQQQVKDTSLKGSFGVTRKEMEVCPSTEQLIQVYELTLHYTQHQDHNAV
TGALELLQQLFRTPPPELLQALTAPGGGQRSGVQYGPGGRSRSGSIAELLAGGGSSCSPV
LSRKQKGKMLFGDAAALEDDSESRSEGSSPAFAASVKGEIGGELAASSGVSTPGSAGSTA
DSVGHDIITEQPRSQHTLQPDSVDLTGCDLASAATDGDEEDILSHSSSQISAVPSDPAMD
LNDGTQASSPVSDSSQTTTEGPDSAVTPSDSSEIVLDGADSQYSGLQIGQPQDEDEEAAS
ILPEEDVDAFRNSAAALQQAHLLKSVGHSRRPSDSSVDMFVSRDEAAEAGDQENKPCRIK
GDIGQSTDDDSVPLVHCVRLLSASFLLTGEKNVLVPDRDVRVSVKALALSCVGAAVALHP
ESFFSKLYKVPLDSVEYPEEPYVSDILNYIDHGDPQVRGATAVLCGTLISSTLSRSRFQV
GDWMGTVRALTGNTFSLEDCIPLLRKTLKDESSVTCKLACTAVRHCVMSLCSSSSSELGL
QLITDVLSLRDSSYWLVRTELLETLAEIDFRLVSFLEAKAENLHRGAHHYTGLLKLQDRV
LHDVVIYLLGDEDPRVRHVAAAALMRLVPKLFYKCDQGQADPVVAVARDQSSVYLKLLMH
ETQPPSHFSVSTITRIYRGYNLLPSMTDVTVENNLSRVIAAVSHELVTSTTRALTFGCCE
ALCLLSTAFPVCVWSLGWHCGAPPLSVSGESRKSCTVGMATVILTLLSSAWFPLDLAAHQ
DALVLAGNLLAASAPRSLRSSWTSEEEASPAAAKQEEVWPALGDRTLVPMVEQLFAHLLK
VINICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQASAPLSPKKGSEAS
PASRQSDASGPVTANKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNSAEKFGGFL
RSALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPMMATVCVQQLLKTLFGTNLASQ
FDGLSSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQDHDA
SGWFDVLQKVSTQLKTNLTSTTKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQRQ
VLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYE
RYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGANKADAGKELETQ
KEVVVSMLLRLIQYHQVLEMFILVLQQCHKESEDKWKRLSRQIADVILPMLAKQQMHIDS
HEALGVLNTLFEILAPSSLRPVDMLLRSMFVTPDTMAPVSTVQLWISGILAILRVLISQS
TEDIVLSRIQELSFSPYLISCPIINRLREGDSTSTPEEHSEGRQMKSLPEETFSRFLLQL
VGILLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAASRLLTVDS
SDSSFYGLDRLNAQVRAMVPTHPALVLLWCQILLLVSHTDHRWWAEVQQTPRRRSLSSTK
SLGPQMSGEEGDSDAASKPGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHIQDL
ISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSAPTTLKKTLQCLEGIHLSQSGA
VVTLYVDKLLCTPFRALARMVDTLACRRVEMLLAANLQSSMAQLPVEELTRIQEYLQSSG
LAQRHQRLHSLLDRLRLATAPGSRGPSPPVTSHPLDGDGPLALETVIPDKDWYLRLVKSQ
CWTRSDSALLEGAELVNRIPPSDMSTFMMNSEFNLSLLAPCLGLGMREVSGGQRSPLFEA
ARLATLDRVTGLVQQLPAAHHVFQPFLPAEPTAYWNKLNDLFGDAVLYRSLTTLARALAQ
YLLVFSKLPGHLHLPPEKERDTVKFVVMTLEALSWHLIHEQIPLSLDLQAGLDCCCLALQ
LPSVWSALSSPEMVTRACSLIHCVRFILEAIVVQPGDQLLSPDRRMNTPKAAREDEVDSN
TQNPAYITAACGMVAEMVEALPSVLALGHKRNSSTPAFLTSVLRNIIISLARLPLVNSYT
RVPPLVWKLGWSPKPGGDFGTAFPEIPVEFLQEKEVFKEFIYRINTLGWTSRTQFEETWA
TLLGVLVTQPLVMEQEESPPEEDTERTQINVLAVQAITSLVLSAMTVPVAGNPAVSCLEQ
QPRNKPLKALDTRFGRKLSIIRGIVEQEIQAMVSKRENVATHHLYQAWDPVPSLSPATTG
ALIGHDKLLLQINPERELGNMSYKLGQVSIHSVWLGNSITPLREEEWEEEEEEEAADVPT
SASPPTSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSGSARRTPIILISEVVRSLLVVS
DLFTERTQFEMMYLTLTELRKAHPAEDEILIQYLVPATCKAAAVLGMDKAVAEPVSRLLE
STLRSSHLPSRVGALHGALYVLECDLLDETAKQLVPVISDYLLSNLKGAAHCVNVHSQQH
VLVMCATAFYLIENYPLDVGPEFSASVIQMCGVMLSGSEESTPSIIYHCVLRGLERLLLS
EQLCRLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKISPGRTSDPSPAAPDS
ESVIVAMERVSVLFDRVRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPY
PQFMATVVYKVFQTLHSSGQSSMVRDWVMLSLSNFTQRSPVAMAVWSLSCFFVSASTSPW
VSAVLPHVISRMGKLERVDVNLFCLVATDFYRHQIEEELDRRAFQSVFEVVAAPGNPYHR
LLTCLRNVHKVASC
NT seq
9405 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctggaaaagctgatgaaggccttcgaatccctcaagtctttccagcagcag
cagcagcaacagcagcagcagccgcagccgccgccgccgccgcctcagcctcctcagccg
ctgccgcaggcgcagccgccgctgcctcagcctcagccgccgcccccgccgccgcccccg
ccgccccccggcccggccgtggccgaggagccgcttcaccgaccaaagaaagaactctca
gccaccaagaaagaccgggtgaatcactgtctgacgatatgtgagaacatagtggcacag
tcactcagaaattctccagaatttcagaaacttctgggcatcgctatggaactcttcctg
ctgtgcagtgatgatgcagagtcggatgtcaggatggtggctgacgagtgcctcaacaga
gtcataaaagcgctgatggactcgaatcttccgcggttacagcttgaactctataaggaa
atcaaaaagaatggcgctccccggagcctgcgtgctgccctgtggaggtttgcggagctg
gctcacctggttcggcctcagaaatgcaggccttacttggtaaaccttttgccttgcctg
actcgaataagcaagagacccgaggaatctgttcaggagaccttggctgcagctgtacct
aaaattatggcttcttttggcaattttgcaaatgacaatgaaattaaggttctattgaag
gctttcatagcgaatctgaagtcaagctcgcctaccattcggcgtactgcagctggctca
gcagtgaccatctgccagcactccagaaggacgcagtacttctatagctggctactgaac
gtactcctgggcttgctggttcctgttgaggacgaacactctaccctcctgattctcgga
gtgctgctcacgttgaggtatttggtgcccttgctgcagcagcaggtcaaggacacgagc
ctgaaaggcagctttggggtgacacggaaagaaatggaagtctgtccctcaactgagcag
ctcatccaggtttacgaactgaccttgcattacactcagcaccaagaccacaacgccgtg
actggggcgctggagctcctgcaacagctcttcaggacgcccccgcccgagctcctgcag
gccttgaccgcgccgggcggcgggcagcggagcggcgtgcagtatgggcccggtggccgg
agccgcagcggcagcatcgcggagctcctagccggagggggttcttcatgcagccctgtc
ctttcaagaaaacaaaaagggaaaatgctcttcggagacgcagcagccttggaggatgac
tccgagtccaggtcggagggcagcagccccgccttcgcagcctcagtcaagggtgagatt
ggtggtgagctggcggcctcttctggagtctccactcctggctccgccggttcaactgcc
gactccgtggggcacgacatcatcaccgagcagccccgctcacagcacacgctgcagccg
gactcggtggatctgactggctgtgacttggcgagcgctgccaccgacggggatgaggag
gacatcctgagccacagctctagccagatcagtgccgtcccgtctgacccagccatggac
ctgaacgatggcacccaggcctcctccccagtcagtgacagttcccagaccaccaccgaa
gggcccgattcggctgtgaccccttcagacagttctgaaattgtgttagatggggccgac
agccagtattcggggttgcagatcggacagccacaggacgaggatgaggaggccgcgagc
attcttccggaggaagacgtagatgctttccgaaactccgcagctgcccttcagcaagca
catttattgaaaagcgtgggccacagccggcggccctccgacagcagtgtggatatgttt
gtctcaagagacgaagctgccgaagcaggagatcaagaaaacaagccttgccggatcaaa
ggtgacataggacagtctaccgatgacgattctgttcctcttgtccattgtgtccgcctt
ctgtcggcttcgtttttgctgactggggagaagaatgtgttggttccggacagggacgtg
agggtcagcgtgaaggcactggcactgagctgtgtgggagccgctgtggcccttcatcct
gagtctttcttcagcaaactttacaaagtacctcttgactccgtggagtaccctgaggag
ccatatgtgtcagacatcctgaactacatcgatcacggagacccccaggtcagaggagcc
acggccgttctctgtgggaccctcatctcctccaccctgagcaggtcccgcttccaagtg
ggagactggatgggcaccgttagagctctgacaggaaatacattttctctggaggactgc
attcctttgctgcggaaaactttgaaggatgaatcttctgtcacttgcaagttggcctgc
acagctgtgaggcactgtgtcatgagtctgtgcagcagtagctccagtgaactgggactg
cagctgatcaccgatgtactgagcctgagggacagctcctactggctggtgaggacagag
cttttggagacgctcgcagagattgactttaggttggtgagctttttggaggcaaaagca
gaaaatctacacagaggggcccatcattacacagggcttttaaaactgcaggaccgagtg
ctccatgacgtcgtcatctacttgcttggggacgaagaccccagggtgcgacacgttgcc
gcagctgcactgatgaggcttgtcccgaagctgttttataaatgtgaccaaggacaagcc
gacccagtggtggctgtggcgagagaccaaagcagcgtttacctgaaacttctcatgcac
gagactcagcccccatctcacttctccgtcagcaccataaccagaatatacagaggctat
aacctactgccaagcatgacagatgtcactgtggaaaataacctctcgagagtcattgcg
gcagtttcccacgagctggtcacgtcgaccacgcgagcacttacgttcggatgctgcgag
gctttgtgtcttctttccactgcctttccagtctgcgtttggagtttaggctggcactgt
ggggcacccccactgagcgtgtccggtgagtccaggaagagctgtactgttggcatggcc
acggtcatcctcaccttgctctcgtcagcttggttcccgctggacctcgcagcgcaccag
gatgcactggtgctggccggaaacctgctcgcagccagtgcccccagatctctgagaagt
tcgtggacctctgaggaagaggccagcccagcagccgccaagcaggaagaggtctggccg
gctctgggtgaccggaccttggtgcccatggtggagcagctcttcgcccacctgctgaag
gtgataaatatctgtgcacacgtgctggacgatgtggctcctggaccggcaataaaggca
gccttgccgtccctgacaaaccctccttctctaagtccgatccgccggaagggaaaggag
aaagagccgggagagcaggcctctgcgcccttgagccccaagaaaggcagcgaagccagt
ccagcctctcgacaatccgacgcctcagggcctgttacagcaaataagtcctcatcactg
gggagtttctaccaccttccttcatacctcaaattgcacgatgtcctgaaagctactcac
gctaactataaggttaccttggaccttcagaacagtgctgaaaagtttgggggctttctg
cgttctgccttggatgtgctctctcagatcctagaattggcaacactgcaggacattggg
aagtgtgtcgaggagatcctaggctacctgaaatcctgtttcagtcgagaaccgatgatg
gcaactgtttgtgttcagcagttgctgaagactctctttgggacaaacttggcctcccag
tttgatggcttgtcttccaaccccagcaagtcccagggccgagcgcagcgtctgggctcc
tccagcgtgaggccgggcttgtaccactactgcttcatggctccctacacccacttcacc
caggccttagccgacgccagcctgaggaacatggtgcaggcagagcaggaccacgacgcc
tcagggtggtttgacgtgcttcagaaagtgtctacccagttgaagacgaacctcaccagc
accactaagaaccgcgcagataagaatgctattcacaatcacattcgtttgttcgagcct
ctggttataaaagctttaaagcagtacacaaccacaacgtctgtgcagctacagaggcag
gtcttagatttgctggcacagctggttcagttacgggtcaattactgtcttctggattca
gatcaggtgtttattggatttgtgctgaagcagttcgaatacattgaagtaggccagttc
agggaatcagaggcaattattccaaacatctttttcttcctggtattactgtcttacgag
cgctatcattcaaaacagatcattggaatccctaaaatcattcagctctgtgacggcatc
atggccagcgggaggaaggctgtgacacatgccataccggctctacagccgatagtccat
gacctgttcgtactgagaggagccaataaagctgatgcaggaaaagagcttgaaacccag
aaagaagtggtggtgtccatgctgctgagactcatccagtaccatcaggtgctggagatg
ttcatcctggtcctgcagcaatgccacaaggagagcgaggacaagtggaagcggctgtcc
cggcagatcgccgacgtcatcctcccgatgttggccaagcagcagatgcacattgattct
cacgaagcccttggcgtgttaaatactttatttgagattctggccccttcctccctccgt
cccgtggacatgcttttacggagtatgttcgtcactccagacacaatggcacctgtgagc
actgttcagctgtggatatcaggaatcctagccattttgagggttctcatttcccagtca
actgaagacattgttctttctcgtattcaggagctctctttctctccatatttaatctcc
tgtccaataattaataggctaagagagggggacagtacttcgacaccagaagaacacagt
gaagggagacaaatgaagagcttgccggaagaaacattttcaagatttctactacaacta
gttggcattcttttggaggatattgttacaaagcagctcaaagtggaaatgagtgaacag
caacatactttctactgccaagaactgggcactctgctgatgtgtctcatccacatcttc
aagtctggaatgttccgtaggatcacagcagccgcctccagactcctcacggtggacagc
agcgacagcagcttctacggcctggacaggctgaacgcgcaggtgcgcgccatggtgccc
acgcatccggcgctcgtgctgctctggtgccagatcctgctgctcgtcagccacaccgac
caccgctggtgggcagaggtgcagcagacccccaggagacgtagtctgtccagtacgaag
tcactcggcccccagatgtccggagaggagggggactccgacgcggccagtaaacccgga
atgtgcaacagagaaatagtgcggcggggagctctcattctcttctgcgattatgtctgt
cagaacctgcacgattcagagcacttaacgtggctcatcgtgaatcatattcaggacctg
atcagtctgtcccatgagcctcccgtgcaggatttcattagtgctgttcaccggaactcc
gccgccagcggcctcttcatccaggcaattcagtctcgttgtgagaacctttcagccccc
accaccctgaagaagacgctccagtgcttggaaggcatccacctcagccagtcgggcgcc
gtggtaacactgtatgtggacaagcttttgtgcaccccgttccgagcgctggctcgcatg
gtcgacacccttgcctgtcgccgcgtggaaatgcttttggccgcaaatttgcagagcagc
atggcccagttgccggtggaggaactaaccagaatccaggaataccttcagagcagcggg
ctggctcagagacaccagaggctgcactccctgctggacaggctccgtcttgctaccgcc
ccgggctcccgtggcccttctcctccagtcacgtcccacccgctggacggggatgggccc
ctggcactggagacagtcattccagacaaagactggtacctacgtctagtcaaatcccag
tgctggactaggtcagattctgcgctgctggaaggggcagaactggtgaatcggattcct
cccagtgacatgagcacgttcatgatgaactcggagttcaacttaagcctgttggcgccg
tgcctgggccttggcatgcgcgaagtctccggaggccagaggagtccacttttcgaagca
gctcgcctggcgactctggaccgtgtgaccggcctggtgcagcagctcccggccgcccac
cacgttttccagccgttcctgcccgcagagcccaccgcctactggaacaagttgaatgat
ctatttggggatgctgtgttgtatcgctccttgaccactctggcccgggctctggcccag
tacctgctggtattctccaaactgcccggccacttgcaccttcctcctgagaaggagagg
gacacggtgaagtttgtggtcatgaccctcgaggccctgtcgtggcatttgatccatgag
cagatcccgctgagtctggaccttcaggcgggcctggactgctgttgcctggccctgcag
ctgcccagcgtctggagcgcactctcctccccagagatggtgacccgcgcctgttctctc
atccactgtgtccgcttcatcctggaagccattgtggtgcagcctggggaccagcttctt
agtccagaccgaaggatgaacaccccaaaggctgccagagaggacgaagtagattcaaac
acacaaaacccggcctatattaccgcagcctgtgggatggtggcagaaatggtggaggct
ttgccgtcggtgttggccttgggccataaaaggaatagcagcaccccagcgtttctcaca
tcggtgctcaggaacatcatcatcagcctggctcgcttacccctcgtcaacagctacacg
cgcgtcccccccctggtttggaaacttggatggtcacccaaaccgggaggggattttggt
acagcgtttcctgagatcccagtggagttcctccaggagaaggaggtctttaaagagttc
atctatcgcatcaacactctagggtggaccagccgcacccagtttgaggaaacgtgggcc
accctcctcggtgtcctggtgactcagcccctcgtgatggagcaggaggagagcccgccg
gaagaagacacggagaggacccagatcaacgtcctggccgtgcaggccatcacctcactg
gtgctgagtgcgatgactgtgcccgtggccggcaacccggccgtgagctgcctggagcag
cagccccggaacaagcccctgaaagctctcgacaccaggtttgggaggaagctgagcatt
atcagaggaattgtggagcaagaaatccaagcaatggtttcgaagagagagaatgtcgcc
acccatcacttgtaccaagcgtgggaccccgtcccttctctctctccagccactacaggt
gccctcatcggccacgacaagcttctgctgcagatcaaccctgagcgggagctggggaac
atgagctacaagctcggccaggtgtccattcactccgtgtggctggggaacagcatcacg
cccctgagagaggaagagtgggaggaggaggaggaggaggaggcggccgacgtccccacg
tctgcatcaccacccacatcgccagtcaactccaggaagcaccgggctggagtcgacatc
cattcctgttcccagtttttgcttgaattgtatagtcgctggatcctgccgtcagggtca
gccagaaggacccccatcatcctgatcagcgaagtggtccgatctctcctagtggtctca
gacttgttcactgagcgcacccagtttgagatgatgtatctgacactgaccgagctgagg
aaggcgcaccctgcagaagacgagattctcattcagtacctggtgcctgccacctgcaag
gcggctgccgtcctcggaatggacaaggccgtggccgagcccgtcagccggctgctggag
agcacactgaggagcagccacctgcccagcagggtcggggccctgcatggcgccctctac
gtgctggagtgtgacctcctggatgagacagcgaagcagcttgtccctgtcatcagcgac
tacctcctgtccaacctcaaaggggcagcccactgcgtgaatgttcatagccaacagcac
gtgctggtgatgtgtgccaccgccttctacctgattgagaactatcccctggacgtaggc
ccagaattctctgcgtcagtaattcagatgtgtggggtgatgctgtccgggagtgaggag
tccactccgtccatcatttaccactgcgtcctgcggggcctggagcgtcttctgctctcc
gaacagctgtgccggctggatgctgagtccctggtcaagctgagtgtggacagagtgaac
gtgcacagcccgcaccgggccatggctgccctgggcctgatgctcacctgcatgtacaca
gggaaggagaaaatcagcccaggcagaacctcagaccccagccccgccgccccagacagc
gagtccgtgattgtggctatggagcgtgtgtccgttcttttcgacagggtcaggaaagga
ttcccctgtgaagccagagtggtggcacggatccttcctcagtttttagatgacttcttc
ccaccccaggatgtcatgaacaaagtcattggggaatttctgtccaaccagcagccatac
ccacagttcatggccaccgttgtgtacaaggttttccagaccctgcacagcagtgggcag
tcgtccatggtccgggactgggtcatgctgtccctctccaacttcacccagaggagcccg
gtggccatggctgtgtggagcctctcctgcttcttcgtcagtgcttccactagcccctgg
gtctccgccgtccttccccacgtcatcagcaggatgggcaagctggagcgagtggacgtt
aacctcttctgcctggtggccacagacttttacagacaccagatagaggaggagctggac
cgccgggccttccagtccgtgttcgaggtggtcgcggctccgggaaacccataccatcga
ctgttgacttgtttgcggaacgtccacaaagtcgcctcgtgctga
DBGET
integrated database retrieval system
