Acinonyx jubatus (cheetah): 106980347
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Entry
106980347 CDS
T04657
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju04512
ECM-receptor interaction
aju04514
Cell adhesion molecule (CAM) interaction
aju04820
Cytoskeleton in muscle cells
aju05144
Malaria
aju05205
Proteoglycans in cancer
aju05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106980347
04514 Cell adhesion molecule (CAM) interaction
106980347
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106980347
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
106980347
09174 Infectious disease: parasitic
05144 Malaria
106980347
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
106980347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aju04131
]
106980347
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
aju04090
]
106980347
00535 Proteoglycans [BR:
aju00535
]
106980347
Membrane trafficking [BR:
aju04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
106980347
CD molecules [BR:
aju04090
]
Proteins
106980347
Proteoglycans [BR:
aju00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
106980347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Romo1
Motif
Other DBs
NCBI-GeneID:
106980347
NCBI-ProteinID:
XP_026889059
UniProt:
A0A6J1X5Z3
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Position
A3:122470455..122494069
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AA seq
310 aa
AA seq
DB search
MRRAALWLWLCALALRLQPALPQIVATNVPPEDQDGSGDDSDNFSGSGAGALQDLTLSQQ
PSSTWKGTELLTAMPTAPEPSGTDNTATSTSVLPAGERPEDREAVLPAEVEPGFTAREKE
TTHPPGETTPQPTTHQASTARATTAQGPVTSHPHRDMKPDHHETSAPAGPSQLDSHAPSV
EDRGPSATEKAAEDGVSTQLPAGEGSGEQDFTFDISGENTAVAAVEPDQRNQPPVDRGAT
GASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQ
KPSKQEEFYA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgctgcgctctggctctggctctgcgcgctggcgctgcgcctgcagccggct
ctcccgcaaatagtggccacaaatgtgccccctgaagatcaggatggctctggggatgac
tctgacaacttctctggctcaggtgcaggtgctctgcaagatctcaccttatcacagcag
ccctcatccacctggaagggcacggagctcctgacggccatgcccacggccccagagccc
agcggcacagataacaccgccacctccacatccgtcctgccggccggagagaggcctgag
gacagagaggcagtgcttccggcagaggtggagcctggcttcacggccagggagaaggag
accacccacccacccggcgagaccacgccacagccgaccactcaccaggcatcaacagca
agagccaccacggcccaggggcctgtcacctcccatccccacagggacatgaagcctgac
caccatgagacctcagctcctgcaggacccagccagctcgactctcacgcgcccagtgtg
gaggaccgtggtccttctgccactgagaaggctgccgaggatggggtctccactcagctc
ccagcaggagagggctctggggagcaggacttcacctttgacatatctggggagaacaca
gccgtggccgctgtggagcccgaccagcggaatcagcccccagtggaccgtggggccacg
ggggcctcccagggcctcctggaccggaaggaagtgctgggaggggtcatcgctggaggc
ctcgtggggctcatcttcgccgtgtgcctggtgggtttcatgctgtaccggatgaagaag
aaggacgagggcagctactccttggaggagcccaaacaagccaacggcggggcctaccag
aagcccagcaaacaggaggagttctacgcctga
DBGET
integrated database retrieval system