Acinonyx jubatus (cheetah): 106983480
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Entry
106983480 CDS
T04657
Symbol
SKIC2
Name
(RefSeq) SKI2 subunit of superkiller complex protein
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106983480 (SKIC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aju03019
]
106983480 (SKIC2)
Enzymes [BR:
aju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106983480 (SKIC2)
Messenger RNA biogenesis [BR:
aju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106983480 (SKIC2)
mRNA degradation factors
3'-5' decay
Ski complex
106983480 (SKIC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
Ski2_N
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
HAS-barrel
DUF3516
ALTTAQ_rpt
Motif
Other DBs
NCBI-GeneID:
106983480
NCBI-ProteinID:
XP_014937164
UniProt:
A0A6J0A1L7
LinkDB
All DBs
Position
B2:complement(119271963..119283301)
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AA seq
1246 aa
AA seq
DB search
MMETERLVLPPPDPLDLPLRPVELGCTGHWELLNVPGAPESTLPHGLPPCAPDLQQETEQ
LFLSSPAWLPLHGVEHSARKWQRKMDPWSLLATLGAPVPSDLQAQRHPTTGQILGYKEVL
LENTNLSATTSLSLRRPPGPVSQSLWGNPTQYPFWPGGMDEPTITDLSTREEAEEEIDFE
KDLLTVPPGFKKGVDFAPKDHPAPAPGLLSLSRLLEPLDLGGGDEDESETVGQPGIPRGD
TVSAPPCSASLARASSLEDLVLKEASTAESPPEPPKPLPQEQWAIPVDVTSPVGDFYRLI
PQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTS
PIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWV
IFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVIST
VARPVPLEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQ
PTHQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI
HLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLF
ATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK
GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSK
AHEQALAELTKRLGTLEEPDTTGQLVDLPEYYSWGEELTETRSLIQRRIMESVNGLKSLS
AGRVVVVKNQEYHNTLGVILQVSSNSTSRVFTTLILCDKPVSENPQERAPATPDVPYPDD
LVGFKLFLPEGPCDHTVAKLQPGDIAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPIAA
VTTAVQELLRLAQAYPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIWGAQCVHSPRF
SAQYLKLQERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRV
ACAMSSHELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGEQLPSTLKQGVERVRA
VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI
QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacggagcgacttgtgctgcctcctccagatcccttggatctgccccttcgg
cctgtggagctgggatgcacagggcattgggagctgctgaatgtgcctggggctccagag
agcacacttccccacggcctccctccctgtgcccccgatctgcagcaggaaacagagcag
ttgtttttatcatctccagcctggttgcctctgcatggtgtggagcactcagcccgaaaa
tggcagaggaagatggatccctggtccctcctggccacactgggggcccctgtcccctca
gaccttcaggcccaaagacacccaaccacaggccagatactgggctacaaagaggtcctg
ctggagaatacaaacctatcggccaccacctccttgtctcttcgccggcccccagggccc
gtctcccagtccctgtgggggaatccaacacaataccctttctggccaggtggaatggat
gagcctaccataacagatctgagcactcgggaggaggctgaggaagagatagactttgag
aaagatcttcttactgtcccacctggcttcaagaaaggtgtggactttgcaccaaaggat
cacccggctccagctcccggcttgctcagcctcagccgtttgctggaacctctggatctg
ggggggggcgatgaggatgagagtgagacagtgggccagccaggaattcccagaggagac
actgtttcagcacccccctgcagtgcttccctggcccgagcaagcagcttggaggaccta
gtgttgaaggaagcatccacagctgaatcccccccagagccccccaaacccctgcctcag
gagcagtgggctattcccgtggatgtcacctcccctgttggtgatttctaccgcctcatt
ccccagcctgctttccagtgggcatttgagccggatgtgtttcagaaacaggccatcttg
cacttggagcggcatgactctgtctttgtagcagctcacacatctgcggggaagacggtt
gtggctgaatatgccattgcccttgcccagaaacacatgacacgcaccatctacacttcg
cccatcaaggccctgagcaaccagaagttccgagactttcgaaacactttcggagatgtg
gggctgctcactggggacgtacagctgcacccggaggcctcctgcctcattatgacgaca
gagatccttcgctccatgctgtacagcggttcagatgtcatccgggacctagagtgggtc
atctttgatgaggttcactacatcaacgatgctgagcgtggggttgtgtgggaggaagtg
cttatcatgctccctgaccatgtctccatcatccttctgagtgctaccgtccccaatgcc
cttgagttcgctgactggatcgggcgactgaaacggcgccagatctatgtgatcagcact
gttgcccgtcccgtacccctggagcattatctcttcacggggaacagccccaagacccag
ggggagctctttctgttgctagactcccgaggtgccttccacacaaaggggtactatgca
gctgtggaggccaagaaggagcggatgagcaaacatgcccagacctttggggccaaacag
cccacgcatcagggggggcctgcacaggaccgcggtgtgtacctatccctcctggcctcc
ctccgcacccgtgcgcagctgcctgtggtcgtgttcaccttctcgcggggtcgctgtgat
gagcaagcctcgggcctcacctccctggacctcaccacaagttcagagaagagtgaaatt
cacctcttcctgcagcgctgccttgctcgcctccgtggctctgaccgccagctgccccag
gtcctgcacatgtctgagctcctgcaccgtggcctgggtgtgcaccacagtggcatcctg
cccattcttaaggagatcgtggagatgcttttcagtcgaggcctggtcaaggtcttgttt
gccacggagacctttgccatgggtgttaatatgcctgctcgaacagtggtgtttgactct
atgcggaaacacgatggctccaccttccgggatctgctacctggagagtatgtgcagatg
gcaggtcgggcaggccggaggggcctggaccccaccggcactgtcatcctgctctgcaag
ggccgtgtgcctgagatggcagacctgcaccgcatgatgatgggaaagccatcgcagctg
caatctcagttccgcctcacatacaccatgatcctgaacctgctgcgggtggacgccctc
agggtggaagacatgatgaagaggagcttctccgagtttccatcccgcaaggacagcaag
gcccatgaacaggctctagctgaactgaccaagagactagggaccttagaggaacctgat
acaactggccaactggttgacctgcctgagtattacagctggggggaggaactgacagag
acccggagcctgatccagcgacgcatcatggagtctgtgaatgggctgaaatctctctca
gcaggaagggtggtggttgtgaagaatcaggagtatcataacacattgggtgttatcctg
caggtctcctcaaattccaccagcagggtgtttacaaccctgatcttgtgtgataagcct
gtgtctgagaacccacaggagagggcaccagccaccccagatgtgccctacccagatgac
cttgtgggattcaagctgttcctgcctgaagggccctgtgaccacacagtggccaagctc
cagccaggagacatagctgccatcaccaccaaggtgctccgggtgaatggggagaagatc
ttggaggacttcagcaagaggcagcaaccaaaattcaagaaggatcctcccattgcggct
gtgaccactgctgtccaggaactgctgcgtttggctcaggcctacccagcgggaccccct
acccttgaccctgtcaatgacctgcagctcaaggatgtgtcagtggttgagggagggctc
cgggcccggaagctggaggagctgatctggggggctcagtgtgtgcacagtccccgtttc
tctgcccagtacctgaagctgcaggagcgaatgcagatacagaaggagatggagcgacta
cgtttcctgctgtcagatcagtcactgttgctgctcccagagtatcaccagcgagtagag
gtgctccgaaccctaggttatgtagacgaggcaggcaccgtgaagctggcggggcgggtg
gcttgtgccatgagcagtcacgagctgcttctcactgagctcatgtttgacaatgctctg
agtgccctgcggccagaagagattgcagccctgctctctggcctggtctgccagagccct
ggggaccctggggagcagctcccaagcaccctcaaacagggagtggaacgtgtccgggct
gtggccaagcggattggtgaggtccaggtggcctgtggcctgaaccagactgtggaggaa
tttgtcggggagctgaattttgggctggtagaggtggtgtacgagtgggcccggggcatg
cccttctctgagttggcagggctgtcggggactcctgagggcctggtggtccgttgcatc
cagcgcttggccgagatgtgtcgctcgctgagaggggcggcccgcctggtaggagaacct
gtgctaggtgccaagatggagacggcagctactttgctgcggagggacatcgtctttgcg
gccagcctatacactcagtga
DBGET
integrated database retrieval system
