Acinonyx jubatus (cheetah): 106983646
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Entry
106983646 CDS
T04657
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
106983646
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aju00536
]
106983646
Glycosaminoglycan binding proteins [BR:
aju00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106983646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
106983646
NCBI-ProteinID:
XP_053073048
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Position
B1:111380871..111840883
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AA seq
662 aa
AA seq
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MLVKKHAGKGGGREPGSEDPRQRCAWTVPPCTSLAALLSVVALMSCLYLGVKTNDLQARI
AALESAKGDPSIHLLPDRLDQLKAVVQEKVEQLLAQRSYEHMAKIRIAREAPSECNCPAG
PPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRGLPGFPTVAALHSNQILTV
KGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGESGKPGEQGLMGPLGPPGQKGS
VGMPGIPGVNGQKGEPGLPGTVGQNGIPGPKGEPGDRGEKGDAGESGPKGDTGEKGDPGS
SAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEA
GPPGRGERGEPGAPGPKGDRGEKGDSGALGPRGPPGQKGDQGATEIIDYNGNLHEALQRI
TTLTVTGPPGPPGPQGLQGPKGEPGSPGIPGVDGEQGLKGSKGDMGDPGMPGEKGGIGLP
GLPGANGMKGEKGDSGLPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGEPGLNGVKG
LKGEPGQKGDRGPLGLPGASGLDGKPGSRGTDGPMGPHGPAGPKGERGEKGAMGEPGPRG
PYGLPGFPGPRGEKGDVGEKGEKGFRGVKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCW
QK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaagaagcatgcggggaaaggtgggggccgggagccaggctccgaggacccg
aggcagcgttgtgcctggaccgtgccgccgtgcacctccctggcggcccttctctcagtg
gtggccctgatgtcttgtctgtaccttggggtgaaaaccaacgacctccaggcgaggatc
gctgctctcgaatccgcaaaaggggacccttccattcatctgctccctgatcgcctggat
cagctcaaagcagtggtgcaagagaaagtggagcaacttctggctcagagatcctatgaa
catatggctaaaataagaatcgcaagagaagcaccttcagagtgcaactgcccagcaggc
cctccggggaaacgaggtaagaggggccgaagaggagaatctggtcctcctggccaacct
ggtcctcagggccctcctggtccaaaaggtgataagggagaacaaggtgaccaaggacct
cggggtctgccaggcttccccacagttgctgctctgcacagtaatcagatcctcaccgtc
aagggtgaccaagggcaggctgggcctccaggacctccaggccctcccggcccaagaggg
cctcctggggacacagggaaagatggccctcgtggaatgccaggagtgcctggtgaatca
gggaaaccaggagaacaaggcttgatgggtcctctggggcctccaggacaaaagggttct
gttggaatgcctggaattccaggggtgaatggtcaaaagggtgagcctgggttgcctgga
acagtcggacaaaacggaataccagggccaaagggagaacctggagatcgaggagaaaag
ggagatgctggagagagtggccccaaaggtgacacaggcgaaaagggtgaccctggatca
tctgcggcaggaattaagggggaacctggagaatctggtcgtccagggcaaaagggtgaa
ccagggcttcctgggcttcctggacttccggggataaagggagaaccaggtttcattggt
cctcaaggagaaccaggcttaccagggttaccaggaacaaagggtgaacgtggggaggca
gggcctcctggaagaggtgagcgaggggagcctggagcccctggaccaaagggtgatcgt
ggagagaaaggggactctggagccctgggaccaaggggtccacctggtcaaaagggagat
caaggagccactgagatcatagactacaatggcaacctccacgaagccttgcagaggatt
accaccttaactgtcacgggtccccctggaccacctggacctcaaggactacaagggcca
aagggagagccaggatctccaggaatcccaggagttgatggagagcagggacttaaaggc
tcaaagggagacatgggggacccaggtatgccaggtgaaaaaggaggaatcggacttcct
ggattaccgggtgccaatggaatgaaaggagaaaaaggagactctggattaccaggtcct
cagggtccttccatcataggcccaccaggcccaccaggcccccatggcccaccaggcccc
atgggacctcatggacttcctggaccaaagggtgaaccagggttaaatggtgttaaagga
ttgaagggtgaaccaggtcaaaagggtgacagaggaccccttggtcttccaggagcatct
ggcttagacggaaagccaggatcccggggtacagatggccctatgggaccccatggccct
gcaggtcccaaaggagaaagaggtgaaaaaggagctatgggagagcctggacccagagga
ccctatggtctgcctggcttccctggtccacgaggcgagaagggtgatgtaggagaaaag
ggagaaaagggattccgtggcgttaagggggaaaaaggggagccaggtcagcctggcctg
gatgggctggatgccccttgccaattggggccagatggattacctatgcctggctgttgg
caaaagtga
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