Acinonyx jubatus (cheetah): 106985669
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Entry
106985669 CDS
T04657
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
106985669
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aju04147
]
106985669
00535 Proteoglycans [BR:
aju00535
]
106985669
00536 Glycosaminoglycan binding proteins [BR:
aju00536
]
106985669
Exosome [BR:
aju04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106985669
Proteoglycans [BR:
aju00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
106985669
Glycosaminoglycan binding proteins [BR:
aju00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106985669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Fz
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
106985669
NCBI-ProteinID:
XP_026897207
UniProt:
A0A6J1XX81
LinkDB
All DBs
Position
C2:complement(1233795..1325908)
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AA seq
1741 aa
AA seq
DB search
MARDPGGRLGLLLLLLLLTYGLAAAQVDLLNWLWAPRTAGPTVEPASAPPRSPHVQPTEE
TAAHVAPRDDPTEQGRAPASPEPPPGRLETGRDPASAAPTASTAGPDTKEENIAGVGAKI
LNVAQGIRSFVQLWDGTTLSQSSTGAETPAPGTPTAPLTLPGPSGVPPEDGTTLWLGSRA
LTSPDTQRTEAGTLPMPTQLPPSPGGPRALLREPSVPPSSPGRASLSSAPGGAPPRGTQP
SPGRPHDLDGGGPSPVAARARRQRRLADSRRPVPHLLPLVTGLPGAHAAPLALSSDLPAL
VSPIPLPAVTGDKGAWAPHVANSVGPGLANNSALPGADLPTPTDQPTRPAAGRCLPLPPS
LPVCGHLGIGRSWLPNHLRHASSEEVRAAARAWGALLRTHCHRFLAWFFCLLLAPPCGAG
PLPAPPPCRQFCEALEDACWSHLDGGGLPVTCASLPAQEDGVCVFIGPGAESLGTEVGLL
QLLGEPPPQQVAQVDDPDVGPAFVFGPDANSGQVARYHFPSPFFRDFSLLFHVRPATEGA
GVLFAITDAAQAVVSVGVKLSAVRDGQQHIQLLYTEPGATRTHTAASFRLPAFTGQWTRF
ALSVDGATVALFVDCELFQRVPLVRSPRALELEPGAGLFVAQAGGADPSKFQGRIAELRV
RGDPRVSPLHCLEEDDEDSGGVSGDFGSGLEENRELLREQSRLSPKPSLPEAPPVTSPPL
AGGRNVEDSRTEEIEEETTMSSLGAWTLPGSDTVTAWSVRSPGGGPEEGPAGSAVQSPDA
QPVPGPQGPPGPPGPPGKDGAPGKDGEPGDPGEDGKPGDPGPQGFPGTPGDMGPKGEKGD
PGVGPRGPPGPQGPPGPPGPSFRHDRLTFIDMEGSGFGGDLESLRGPRGFPGPPGPPGVP
GLPGEPGRFGMNSSDVPGPAGLPGVPGRDGAPGLPGAPGPPGPPGRDGGPGKTGQKGSPG
EAGAPGPKGSKGDPGPTGAPGETGLAGAPGPAGPPGPPGPPGPPGPGLAAGFEDMDGSGG
PFWSTAHGASGPQGPPGLPGVKGDPGIAGPPGAKGEVGADGPPGFPGLPGREGTAGAQGP
KGEKGTQGEKGDPGRDGVGQPGLPGPPGPPGPVVYVSEQDRAVAGVPGPEGRPGYAGFPG
PAGPKGDLGSKGQRGPPGPKGEKGEPGPVFSPDGGTLGPAQKGAKGEPGFRGPPGPYGRP
GHKGEIGFPGRPGRPGMNGLKGEKGEPGHASVGFGVRGPPGPPGPPGPPGPPGTPVYDSN
DFMESGRPGPPGLPGYQGPPGPKGDKGEVGPPGPPGQFPLDLLQLEAEMKGEKGDRGDPG
QKGERGEPGGGGFFGSSVPGPPGPPGYPGIPGPKGESIRGQPGPPGPQGPPGIGHEGRQG
PPGPPGPPGPPGPPSFPGPYRQTISVPGPPGPPGPPGPPGTMGTSSGQVRIWATYQTMLD
KVPEVPEGWLIFVAETEELYVRVRNGFRKVLLEARTPLPRGTDNEVAALQPPLVQLHEGN
PYPRRELTHSTARPWRADDILAGPPRLPDPRPYPGAPHHGPYLHVQPARPTGGPARTHTH
QDFQPVLHLVALNSPQPGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRR
ADRTGVPIVNLRDEVLFPSWEALFSGSEGQLKPGARVFSFDGRDVLQHPAWPQKSVWHGS
DPSGRRLTDSYCETWRTEDAAAAGQASSLLAGRLLAQKAASCRNAFIVLCIENSFMTSSS
K
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgaccccggcggccgcctgggccttctgctgctgctgctgctgctcacctat
ggcctcgcggccgcccaggttgacctactgaactggctgtgggcccctaggaccgctggg
cccacggtggaaccggcctccgcgcccccgcgcagcccacacgtgcagcccacggaggag
accgcggctcacgtggccccccgggatgaccccacggagcaggggagagcccctgccagc
cctgagccacccccggggaggctggagaccggtcgggacccggcttccgccgcacccact
gcctccacggcgggcccggacacgaaggaggagaacatcgccggcgtcggagccaagatc
ctgaacgtggcccagggcatccgcagcttcgtccagctgtgggacggcaccactctcagc
cagagctccaccggggcggagacgccagcccctgggacccccacggcccccctcaccctc
ccggggccctccggcgttcccccggaggacgggaccactctctggctgggcagtagggcc
ctgacctctccggacacccagaggaccgaggctggcaccctgccaatgcccactcagctg
cctccctcccccggcgggccccgggcactgctcagggagccctcggtgccgccatcttct
ccaggtagagcttctctctcctctgcgccgggcggggcccctccccgggggacacagccg
tccccggggcggccccacgatctggacggcggaggaccctcccccgtggcagcccgtgcc
cgccggcagcgccgactcgctgacagccgcaggcccgtgccacatctgcttccgctggtg
acgggtctcccgggcgcccacgctgcccccttggctctgtcctctgacctccccgccctg
gtgtctccgatcccactccccgctgtcaccggggacaagggtgcttgggctcctcacgtg
gctaactctgtggggcctggtctcgctaataactccgcgctgcccggggctgacctgccg
acccccaccgatcagcctacccgccccgccgctggccgctgcctgcccctgccgccctcc
ctgccggtctgcggtcacctgggcatcgggcgctcctggctgcccaaccacctccggcac
gccagcagcgaggaggtgcgggccgccgcgcgggcgtggggggccctcctccggacgcac
tgccaccgcttcctcgcctggttcttctgcctgctgctggccccgccctgcggtgctggc
ccgctgcccgcccctccgccctgccgccagttctgcgaggccctggaggatgcgtgctgg
agccacctggacgggggcgggctgccggtcacctgtgcctcgctcccggcccaggaggac
ggggtctgcgtgttcattgggccgggtgcagagagcctgggcacggaggtggggctcctg
cagctgctcggagagccgccgccccagcaggtcgcccaggtggacgaccctgacgtcggg
ccggccttcgtcttcggcccggatgccaacagcggccaggtggcccggtaccacttcccc
agcccgttcttccgcgacttctcactgctcttccacgtccggcccgccaccgagggcgcg
ggggtgctgttcgccatcacggacgcggcccaggcggtggtctccgtgggcgtgaagctg
tcagccgtgcgtgacgggcagcagcacatccagctcctgtacaccgagcccggcgccacc
cgcacccacacggccgccagcttccgcctgcccgccttcaccggccagtggacgcgcttc
gcgctcagcgtggatggcgcgaccgtggcgctgttcgtggactgcgagctgttccagagg
gtgcccttggtgcgctccccgcgggccctggagctggagcccggcgccggcctcttcgtg
gcccaggctggaggagcagaccccagcaagttccagggaaggatcgcggagctgagggtg
cgcggagacccccgggtgagccccctgcactgtctggaggaggacgacgaggacagcggt
ggggtgtctggagacttcgggagcgggctagaggagaaccgggagcttctcagggagcag
tcgcgtctgtccccaaagcccagcctccctgaggctccaccagtcacttctccgcccttg
gctggaggcaggaatgtggaagattccagaactgaagaaattgaggaagaaaccacgatg
tcttcgttgggagcttggaccctccccggctcagatactgtcaccgcatggagcgtccgg
agccctgggggcggcccggaagagggtcctgcaggctctgcagtacagagccccgatgca
cagcctgtacccgggccacagggccccccgggccccccagggccaccggggaaggacggt
gctcctggaaaggacggtgagccgggcgatcctggtgaagacgggaaacctggtgaccct
gggccacagggcttccccgggaccccaggagacatgggccccaagggcgagaagggggac
cctggagtcgggccaagaggacccccaggaccccaagggcctccggggccaccaggaccc
tccttcagacatgacaggctgaccttcattgacatggaggggtccgggttcggcggtgac
ctggagagtctccgaggcccgagaggcttccctggccccccggggccccccggcgtccca
ggcctgcccggagagccaggccgctttgggatgaacagctccgacgtcccaggccccgca
ggccttcctggagtgcctgggcgggacggggcccccgggcttcctggcgccccgggaccg
ccaggtcctccaggaagagacgggggaccaggaaagactggccagaaaggcagccccggc
gaagcgggcgccccgggacctaagggaagcaagggggaccctggccccactggcgctccc
ggggagactggcttggcaggagcccccggaccagctggaccaccagggccccccgggccc
cccgggcctccaggaccaggacttgccgcggggtttgaggacatggacggctctggggga
cccttctggtcaactgctcacggagccagcgggccacagggaccaccaggcctgccgggg
gtcaagggggaccctggaatagccggaccaccaggcgccaagggagaagtcggagccgat
ggacctcccgggttccccggcctccctggcagagagggcacagccggagcccagggaccc
aaaggagaaaaagggacccagggagagaaaggtgacccagggagggatggagtggggcag
cctggcctccccggaccccccgggccccccggacctgtcgtctacgtgtcggagcaggac
agagcagtggcaggcgtgccgggacctgagggccggccggggtacgcgggctttcctgga
ccggctgggccaaagggagatctgggctccaaaggccagcggggccccccgggacccaag
ggtgagaagggcgagccgggcccagtcttcagccccgatggcggcacgctgggccctgcc
cagaaaggagccaagggagagcccggcttccgaggaccgccgggtccatatggacggccg
gggcacaaaggggagattggcttccctgggcggccgggtcgccccgggatgaacggactg
aaaggcgagaaaggggagccaggacatgccagcgtcggctttggtgtgaggggcccaccc
ggtcccccggggcctccaggacccccaggccctcccgggactcccgtctatgacagcaac
gacttcatggagtctggccgccccggacctccaggattgccagggtaccaggggcctcct
ggaccgaagggtgataaaggagaagtgggcccaccaggaccaccagggcagttcccgctc
gacctcctccagctggaggctgaaatgaagggggagaagggtgatagaggagacccgggg
cagaagggcgaacggggtgagcccgggggtggcggattcttcggctccagtgtgcccggc
ccccccggcccgccaggctaccctgggattccgggtcccaagggagagagcattcggggc
cagccaggcccacctggacctcaggggccccctggcatcggccatgaggggcgtcagggg
cctcctggcccccccggcccccccgggcccccggggcccccttccttccccggcccttac
aggcagacaatcagtgttcccggccccccaggcccacctgggccccccggaccccctgga
accatgggcacctcctcagggcaggtaaggatctgggccacgtaccagaccatgctggac
aaggtgccggaggttccggagggctggctcatctttgtggctgagacagaggagctgtac
gtccgggtccggaatgggttccggaaggtcctgctggaggcgcggacacccctcccacgt
gggacggacaacgaggtggccgccctacagcccccgctggtgcagctgcacgagggcaac
ccgtacccccggcgggagctcacccactccacggcgcggccctggcgggcggatgacatc
ctggccggccccccgcgcctgccggacccccggccctaccctggcgccccccaccacggc
ccctacctgcacgtccagccagctcgccccaccggcgggcccgcccgcacccacacccac
caggacttccagcccgtgctccatctggtcgcactcaacagcccccagccgggcggcatg
cgcggcatccggggcgcggacttccagtgctttcagcaggcgcgcgccgtggggctggcg
ggcactttccgcgccttcctgtcctcgcggctgcaggacctctacagcatcgtgcgccgt
gctgaccgcacgggtgtgcccatcgtcaacctccgggacgaggtgctgtttcccagctgg
gaggccttgttctccggctccgagggccagctgaagcccggggcccgcgtcttctctttc
gacggcagagacgtcctgcagcatcctgcctggcctcaaaagagcgtgtggcacggctcg
gaccccagcgggcgccgtctgaccgacagctactgcgagacgtggcggacagaggacgcg
gcggcggctggccaggcctcctcgctgctggcgggcaggctgctggcgcagaaagccgcg
agctgccgcaacgccttcatcgtgctctgcatcgagaacagcttcatgacctcctcctcc
aagtag
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