Acinonyx jubatus (cheetah): 106987916
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Entry
106987916 CDS
T04657
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106987916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aju03019
]
106987916
Messenger RNA biogenesis [BR:
aju03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106987916
U7-dependent histone pre-mRNA processing factors
106987916
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
106987916
NCBI-ProteinID:
XP_014941756
UniProt:
A0A6J1ZYL7
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Position
B3:132698570..132732285
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AA seq
782 aa
AA seq
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MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPSAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDVEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDL
EMQVDAPSDSSVLAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattatcaaattaactaccctctcgggggttcaggaagagtctgctctttgc
tatcttctgcaagttgacgagtttaggtttctcctggactgtggctgggatgagcacttt
tctatggatattatagactccctgaggaagcatgttcaccagattgatgcagtgctgttg
tcccatcctgatcctctccatcttggtgccctcccgtctgctgtcgggaagctggggctg
aattgtgcgatctatgcgaccattcctgtttataaaatgggacagatgttcatgtatgat
ctttaccagtctcgacacaacacagaggactttacgctctttacattagacgatgtggat
gcagcctttgataaaatacagcagttaaaattctctcagattgtgaatttgaaaggtaaa
ggacatggcttgtctatcacacctctgccagctggtcatatgataggtggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtctatgcagttgactttaaccacaagagg
gagatccatttaaatggatgttccctggaaatgctaagcagaccctccctgcttatcaca
gattcatttaatgctacgtatgtgcagcctcggaggaaacagagagatgaacagcttctg
acaaatgtcctggagacgcttcgaggtgatggaaatgtgttaatagcagtggacactgca
ggcagagttttggaacttgctcaactccttgatcagatctggagaactaaagatgcaggg
ctaggtgtctactcactggcactcctgaataatgtcagctacaatgtggtggagttttct
aagtcccaggtagaatggatgagtgacaaattgatgagatgttttgaagacaaaagaaat
aatccatttcagttccgccacctctctctgtgccacggtctttctgacctggcccgggta
ccaagccctaaagtggtgcttgccagccagcccgacctggaatgtggattttcaagggat
ctctttattcagtggtgtcaggaccctaaaaactcaatcattctaacctacagaactact
cctgggactttagcacgtttcctaattgataatccttccgaaaaaattacagaaatagag
ttaaggaagcgtgtgaagcttgaagggaaagaacttgaagaatacttggaaaaagagaaa
ctaaagaaagaagctgcgaaaaaacttgagcagtcaaaagaggcagacatagattctagt
gatgagagtgacgttgaggaagatattgaccagccctcagctcataaaaccaagcatgac
ctgatgatgaaaggtgaaggtagtcgtaaaggaagtttcttcaaacaggctaaaaagtct
tatcctatgtttcctgccccagaagaaagaattaaatgggatgaatatggagaaattatc
aaaccagaggatttcttagtgccagaacttcaagcaactgaagaagagaaaagcaaattg
gaatctggcttgacaaatggagatgaacccatggatcaggatctatctgatgttcccact
aagtgtatttctacaacagagtctattgaaataaaagctagggttacttacatagactat
gaaggacgctctgatggagattccattaaaaagatcattaatcagatgaaaccacgacag
ttgatcattgtccacggaccaccagaggccagtcaagatcttgccgagtgctgccgtgca
tttggtgggaaagatattaaggtgtacatgccaaagctacacgaaacagttgacgccact
agtgaaactcacatctaccaggtgagattgaaagactcacttgtcagctcccttcagttt
tgtaaggcaaaagacgctgaattagcttggatagatggagtcttagacatgagagtttcc
aaagtggacacaggagttatcttagaagaaggagaactgaaggatgatggagaagacttg
gaaatgcaggtggacgctccttcggactccagcgttctggcacaacagaaggccatgaag
agcctgtttggggatgatgaaaaagaaacgggtgaagaaagtgagatcattccgactttg
gagcccttacccccccatgaggttcctggacaccagtcagtttttatgaacgaaccaaga
ctgtcagacttcaaacaagttcttttacgggaggggattcaagctgaatttgtagggggc
gtacttgtttgcaacaatcaagtagcagtccgcaggacggaaactggccgcattggatta
gaaggctgcctttgtcaagatttttataggataagagaccttttatatgaacagtatgcc
attgtgtaa
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