Acinonyx jubatus (cheetah): 106989119
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Entry
106989119 CDS
T04657
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106989119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aju03041
]
106989119
Enzymes [BR:
aju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106989119
Spliceosome [BR:
aju03041
]
Complex C
Other components
Step II factors
106989119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
PhoH
AAA_30
Flavi_DEAD
Microtub_bd
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
106989119
NCBI-ProteinID:
XP_014943100
UniProt:
A0A6J0AB25
LinkDB
All DBs
Position
E2:14569164..14588460
Genome browser
AA seq
1226 aa
AA seq
DB search
MEDTSEDASIHRLEGTDLDSQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLASLKRR
EREEKDDGEDKKKSRISSYKDWEESKDDQRDAEEEDSDQAGRHSRKDRHYRSARVETPSH
PGGVSEEFWERSRQRERERREHGVYASSKEEKDRKKERSRDRDSDRKRDRDERDRSRHSS
RSERDGGSERSRRNEPESPRHRPKDAATPSRSTWEEEDSGCGSSRRSQWESPSPTPSYRD
SERSHRQSSRDRDRSVRSRYSDDTPLPTPSYKYNEWADDRRHLGSTPRLSRGRGRREDGE
EGISFDTEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQKQK
RISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDSAAKVHLMVHNLVPPFLDGRI
VFTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMGV
KKEEEPDKALTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQEL
LTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEM
GGSLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNT
DVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQE
DYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQ
LPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQ
IYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSL
GVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIV
SCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNN
NYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQA
AKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWL
AELGPMFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRS
TKIYTPGRKEQGEPMTPRRTPARFGL
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaccagcgaggatgcctcgatccatcgattggaaggcactgatctggactct
caggttggtggtcttatttgtaagactaaaagtgcagccagtgaacagcatgtcttcaag
gcccctgccccccgcccttccttgctgggactggacttgttggcttccctgaaacgaagg
gagcgagaggagaaggacgatggagaggacaagaagaagtccagaatctcttcctacaag
gactgggaagagagcaaagatgaccagagagatgctgaggaggaagatagtgaccaagct
ggccgacatagccgaaaagacaggcattatcgatctgctcgggtagagactccatcccat
cctggtggtgtgagtgaagagttttgggaacgcagtcggcagagagagcgggagcggcgg
gaacatggcgtctatgcctcgtccaaagaagaaaaggatcggaagaaagagagatcacgg
gatcgagactctgaccgcaagagagacagagatgagagggatagaagcagacacagcagc
agatctgagcgggatggagggtcagagcgcagcagaagaaatgaaccagagagcccgaga
caccgacctaaagatgcagctaccccttcaaggtctacctgggaggaagaggacagtggc
tgtggttcctcaaggcgctcgcagtgggaatcgccttccccgacaccttcctatcgagat
tctgagcggagccatcggcagtccagtcgagatcgcgataggtccgtgaggagcaggtac
tcagatgacacacctctgccaaccccatcctacaaatacaacgaatgggccgatgacagg
agacacctggggtccacaccccgtctgtccaggggccgaggaagacgggaggatggcgaa
gaaggaatttcatttgacacagaagaggaacggcagcagtgggaagatgaccagaggcaa
gctgaccgggactggtacatgatggatgagggatacgatgagttccacaaccccctggcc
tactcctccgaggactacgtgaggaggcgggagcagcacctgcataaacagaagcagaag
cgcatttctgctcagcggaggcagatcaatgaggataacgagcgctgggagaccaaccgc
atgctcaccagtggagtggtccatcggctagaggtggatgaggactttgaggaggacagc
gcagccaaggtgcatctgatggtgcacaacctggttcctcccttccttgatggacgcatc
gtcttcaccaagcagccggagcctgtgattccagtcaaggatgctacttctgacctggcc
attattgcccggaaaggcagtcaaacagtgcggaagcacagggagcagaaggaacgcaaa
aaggctcaacacaaacactgggaactggctggaaccaagctgggagatataatgggtgtc
aaaaaagaggaagagcccgataaagcgctgacagaagacggtaaagtggactataggacg
gagcagaagtttgcggatcacatgaagaaaaagagtgaagctagcagcgaatttgccaaa
aagaagtcgattctggagcagaggcagtacctgcccatctttgctgtgcagcaggagcta
ctcactattatcagagataacagcatcgtgattgtggttggagaaacagggagcggtaag
accacccagctgacacagtacttgcatgaagacggttacacggactacgggatgattggg
tgcacccagcctcggcgtgtggctgccatgtcggtggccaagagagtcagtgaagaaatg
ggaggaagccttggtgaggaggtgggttatgccatccgctttgaagactgcacctcagaa
aacaccttgatcaaatacatgactgacgggatcctgctccgggagtccctccgggaagca
gacttggatcactatagtgccatcatcatggacgaggctcacgagcgctccctcaacact
gacgtgctctttgggctgctgcgggaggtggtggctaggcgctcagacctgaagctcatt
gtcacatcggctactatggatgcagagaaatttgctgcctttttcgggaatgttcccatc
ttccacatccctggtcgtaccttccctgttgacattctcttcagcaagacgccgcaggag
gattatgtggaggccgcggtgaagcagtccttacaggtgcatctgtcgggggcccccggg
gatatccttatcttcatgcctggccaagaggacattgaggtgacctcagaccagattgtg
gaacatctggaggaactagagaatgcacctgccttggctgtgctgcccatctactcccag
ctgccttctgatctccaggccaaaattttccagaaggctccagatggagttcggaagtgt
atcgttgccaccaacattgccgagacatctctgactgtcgatggcatcatgtttgttatt
gactctggttattgcaaattaaaggtcttcaaccccaggattggcatggatgctctacag
atctatcccatcagccaggccaatgccaaccagaggtcagggcgagccggcaggacgggc
ccaggtcagtgtttcaggctctacacccagagtgcctacaagaacgagctcctgacgacc
acggtgcccgagatccagaggactaacctggccaacgtggtgctgctgctgaagtccctc
ggggtgcaggacctgctgcagttccacttcatggacccgccccccgaggacaacatgctc
aactccatgtatcagctctggatccttggggccctggacaacacaggtgggctgacctcg
actgggcggctgatggtagagttcccgctggacccggccctgtccaagatgctcatcgtg
tcctgtgacatgggctgcagctccgagatcctgctcattgtgtccatgctctcggtgcca
gccatcttctacaggcccaagggccgagaggaggagagtgatcaaatccgggagaagttt
gctgtccccgagagtgatcatttgacctacctgaatgtctacctgcagtggaagaataat
aattactccaccatctggtgtaatgatcatttcatccatgccaaggccatgcggaaggtc
cgggaggtgcgggctcagctcaaggacatcatggtacagcagcggatgagcctggcctcg
tgtggcactgactgggacatcgtcaggaagtgtatctgtgctgcctatttccaccaggca
gccaagctcaagggaatcggggagtatgtgaatatccggacagggatgccctgccacttg
caccccaccagctccctctttggaatgggctacaccccagactacatagtgtatcacgag
ctggtcatgaccaccaaggagtacatgcagtgtgtcactgctgtggatggagagtggctg
gcggagctgggccccatgttctacagcgtcaaacaggcgggaaagtctcggcaggagaac
cgccgacgggccaaagaggaagcctctgccatggaagaggagatggcactggctgaggag
cagctgcgagcccgccggcaggagcaagaaaagcgcagccctctgggcagtgtcaggtct
acaaaaatctacactccaggtcggaaggagcaaggggaacccatgacccctcgccgcaca
ccagcccgctttgggctctga
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