Acinonyx jubatus (cheetah): 106989364
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Entry
106989364 CDS
T04657
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
aju
Acinonyx jubatus (cheetah)
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aju03019
]
106989364
Messenger RNA biogenesis [BR:
aju03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106989364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
ING
DUF4778
PNPase
Motif
Other DBs
NCBI-GeneID:
106989364
NCBI-ProteinID:
XP_026922205
UniProt:
A0A6J2A1D4
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All DBs
Position
B3:complement(131147305..131201235)
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AA seq
1164 aa
AA seq
DB search
MALFPAFAGIGETSGSGNARKELDWLSNPSFCAGAITSLSQQTEGATALVSEGSPLTRSP
LKSEPSDESDTNKKPKQTSRKKKKEKKKKRKHHHKKTRRKHGRPSSSGSEPDSDSEKDKA
SRSIRDSKKESEKPNREGNAVADTGHRCVWLEDVQALTGETFRTDKKPDPANWEYKSLYR
GDIARYKRKGDSCLGINPKKQCISWEGAATEKKHSHKHVERYFTKKSVGLMNVDGVAVGG
KTEPPSSEPVSFIPVKGSDDVVPPVTTWLNPLGIYDQSTTQWLQGQGPSEQESKRPDSQT
DREHALLKAKVEEFNRRVRENPRDIQLWMAFVAFQDEVIKSPGLYAIEEGEQEKRKRSLR
LVLEKKLAILERAIESNQSSVDLKLAKLKLCSEFWEPSALAKEWQKLIFLHPNDTALWQK
YLLFCQSQFSTFTVSKIHGLYGKCLSTLSAVKDGSILSHPALPGTEDAMFGLFLQQCHFL
RQAGHSEKAVSLFQAMVDFTFFKPDSVKDLPTKGQVEFFEPFWDSGEPRVGEKGARGWRA
WMHQQERGGWVVISPDDDDDEPEDEDQEIREKSLPRWQIWLATERSRDQRHWRPWRPDKT
KKQTEEDCEDPERQVLFDDIAQSMIRLSSQDLQFQLVAAFLQFLGVPSGLSPPASCLYLA
MDENSIFDDGLHDEMPLTFLNLSSSGVSCVGCSDPLGRRRWTRGHNREGEEFIRNIFHLV
MPLFSGRERSQLCFSWLRYEIEKVIWCLHTKNKKRLKSQGKNCKKLAKNLLKEPENRNSF
CLWKQYAHLEWLLGNTEDARKVFDAALSMAGGRDLRDRELCELGLLYAGLEAELLPDPRG
AATARAIHVLTRLTEQGPCGPYSGQALAVHILKARKAYEHALQDCLGDSCVSAPAPSNSF
DRLTSLVKCFMLFQYLTVGIDAAVRVYEQVLAKLKGSVPPGGSDPEDGARAQGPHGALEA
VMLMHTSLLRFHTKVSLYPLAPLRQALSEALRLYPGNQVLWRAYVQIQSRSHTASETRRF
FDAVTRSTKLLEPWLFAIEAEKMRKRLVESVQRVDGREVHATIPETGLTHRIRALFENAL
RSDNGSQCPLLWRMYLNFLVSLGNKERSKGMFYKALQNCPWAKVLYLDAVEHFPEEMQEV
LDLMTEKELRVRLPVEELALLLED
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttcccggcctttgcaggcattggtgagacttccggtagcggcaatgccagg
aaagaattagactggctgagcaacccaagcttttgtgctggagccataacctctctgagc
caacaaactgaaggggccacagccctggtttctgaagggtcacctctgacaaggagccct
ctgaaatcagagccttcggatgaaagtgacactaacaaaaagcccaaacaaacaagcaga
aaaaagaagaaagagaaaaagaagaaaaggaagcatcaccacaagaaaaccaggagaaaa
catgggaggcccagtagcagtgggtctgagccagatagtgattctgaaaaggataaagct
tccagaagcattagagacagtaaaaaggaatcagagaaaccaaaccgagaagggaacgcc
gtcgctgatactgggcaccgctgcgtctggcttgaggacgttcaggctctcacaggggaa
accttcagaacagataagaaaccggatcctgcaaactgggagtataagtctctctaccga
ggagatatagcaagatacaagaggaaaggggactcctgccttggcattaaccctaagaag
cagtgcatatcctgggagggggctgccacagaaaagaagcactcacacaagcatgtcgag
cgctatttcacgaagaagagcgtgggactgatgaacgttgacggagtcgctgttggcggt
aaaaccgaacctccctcatctgagccggtctcatttatcccagtgaagggctcggatgat
gtggttcctcctgttacgacctggttgaaccctctggggatttacgatcagtccaccaca
cagtggttacaaggacagggtccttcagagcaagaatcaaagcggccagactcacagaca
gacagagagcatgccctgctcaaggccaaggtggaggagtttaacaggagagttcgggag
aatcccagggatattcagctgtggatggcatttgttgcttttcaggacgaggtcataaag
agccctggcctgtatgccatcgaggaaggagagcaggaaaagcggaagcggtctctgagg
ctcgttctggagaagaagctggccatcctggagcgggccatcgaaagcaaccagagcagc
gtggacctgaaactcgccaagctgaagctctgctccgagttctgggagccctccgccctg
gccaaagagtggcagaaactgatctttctgcatcccaacgatacagccctgtggcagaaa
taccttttattttgccagagccagtttagcacctttacagtgtcaaaaattcacggtctg
tacggcaagtgcttgagcaccttgtctgccgtgaaggacggcagcatcttatcgcacccc
gccctgccaggcaccgaggacgccatgtttggtctctttcttcagcagtgccacttcctg
cggcaggctggtcactctgagaaggcggtctctctgttccaggccatggtcgacttcacc
ttcttcaaacccgacagtgtgaaagacctgcccaccaaaggacaggtggaattctttgag
cccttctgggacagtggggagccccgggttggcgagaagggcgcccgaggctggagagcg
tggatgcaccagcaggagcggggtggctgggtggtcatcagtccagatgatgatgatgat
gagccagaagatgaggaccaggaaataagagagaagagtctgcccaggtggcagatctgg
cttgccaccgagcggtcccgagaccagaggcactggcggccgtggcgccctgataagacc
aagaagcaaaccgaggaagactgtgaggatccagagagacaggtgctgtttgatgacatt
gcccagtctatgatccgtctttccagccaggatcttcagtttcagctggttgcggccttt
ctgcagttcctgggcgtgccttctggcctcagccctccagcctcttgcctctacctggcc
atggatgagaacagcatcttcgatgacgggcttcatgacgaaatgccactgacttttctc
aacctttcctcttctggtgtcagctgtgttggctgctcagacccactgggccgccggcgc
tggacccggggtcacaatcgagagggcgaggagttcatccgcaacatctttcaccttgtg
atgcctttgttttcaggccgggagaggtctcagctctgcttctcttggttacggtacgag
atcgagaaggtcatttggtgtctgcacactaaaaacaagaagaggctaaagtcacaggga
aagaactgcaagaaactagccaaaaatctcctgaaggagccagaaaaccgcaacagtttt
tgcctctggaagcagtacgcacatctggagtggctgcttggcaacaccgaggacgccagg
aaggtgttcgatgcggctctcagcatggcggggggcagagacctgagggaccgtgagctg
tgtgagcttggcctcctctacgccggcctggaggcggagctgttgccggacccgagaggg
gccgccacggcacgagccattcacgtactgaccaggctgacggagcaggggccctgcggg
ccctactccgggcaggcgctggctgttcacatcttgaaagctcggaaggcgtacgaacac
gcgctgcaggactgtttgggcgacagctgtgtgtctgctccggctcccagcaactccttc
gaccgcctgactagcctggtgaaatgcttcatgctctttcagtacttgaccgtagggatc
gacgcggccgtgcgggtgtacgagcaggtgctcgcaaaactgaagggctctgttccccca
gggggctctgacccggaggacggtgcccgcgcccagggcccccacggtgcgctggaggcc
gtgatgctgatgcacacgagcctgctcaggttccacacgaaagtcagcctttaccccctg
gctcctctgcgacaggctctctccgaggcgttaaggttgtacccaggcaaccaggtgctt
tggcgggcatacgtgcagattcagagcaggtcccacacagccagtgagaccagaagattt
ttcgacgcggtcaccaggtctaccaaactcttggagccttggttgtttgcgatcgaggcc
gagaaaatgaggaagagactggtggaaagtgttcagagggtagatggtagagaggtccac
gccacaattcccgagaccggcttgacacatcgcatcagagccctgtttgaaaatgcgttg
cggagcgacaacggcagccagtgccccttactgtggaggatgtacctgaattttttggtt
tccttaggaaacaaagaaaggagcaaaggcatgttctacaaagcacttcagaattgtccc
tgggcaaaggtgctgtacctggacgccgtggagcacttccccgaagagatgcaagaggtc
ctggacctgatgacggagaaggagctccgggtgcgcctgcccgtcgaggagctggcgctt
ctgctggaggactag
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