Advenella kashmirensis: TKWG_03070
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Entry
TKWG_03070 CDS
T02117
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
aka
Advenella kashmirensis
Brite
KEGG Orthology (KO) [BR:
aka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aka03009
]
TKWG_03070
Enzymes [BR:
aka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TKWG_03070
Ribosome biogenesis [BR:
aka03009
]
Prokaryotic type
rRNA helicases
TKWG_03070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
AAA_22
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
AFK61214
UniProt:
I3U876
LinkDB
All DBs
Position
complement(532900..534300)
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AA seq
466 aa
AA seq
DB search
MRLRHHQAIMSFSTLPLSDAQQKNLAELGFQTMTPIQSASLPAVLEGRDVLAQAKTGSGK
TLAFALGLLQRLNPAYFGCQALVLCPTRELAEQVAQEVRKLARALGNIKVLALYGGTALK
PQAESLQHGAHIVVGTPGRVLDLVDRDVLNLSAVKVLVLDEADRMIDMGFYEDISAITQA
CPLKRQNLLFSATFPPAILKASEGFLMNPVHVRTDDKPDHPDTDSWFVATEDADRFETTA
TLLNAYRPVSTLAFCNTKAQCEALTDSLLERGIEARTLHGDMDQRDREDVLVDFIGQSCS
VLVATDVAARGLDIATLDAVINVDMSPNAETHIHRVGRTGRVAGRGGLALTLCTPKEKFR
AERIEQALGKPLAWLDMNTLKRARGAFTPPMRTICIRGGKKDKLRPGDLLGALTKDLGLQ
ADQVGKISLFDFVAFVAIDRSIAEDTLQRLSQRPIKGRSFQMRFLS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
ttgcgccttcgtcaccatcaggccatcatgtctttttccacccttcccctttccgacgcc
cagcagaaaaacctggccgaactcggctttcaaacgatgacgccgatccagtccgccagc
ctgccggccgtcctggaaggccgcgatgtgctggcccaggcaaaaaccgggagtggcaag
acactggccttcgcactgggtctgctgcagcgcctgaaccccgcctatttcggttgccag
gcgctggtcctgtgcccgacccgggaactggccgagcaggttgcacaggaagtgcgcaag
ctggcacgggcgctgggcaatatcaaagtacttgcactatatgggggcaccgcactgaaa
ccgcaggcagaatcgctccagcatggtgcacatattgtggtcggcacgcccggccgagtg
ttggatttggtcgaccgcgatgtcctgaatttgtctgccgtcaaggtgctggtgctggat
gaagccgatcgcatgatcgatatgggtttttacgaagacatcagcgcgatcacccaggcc
tgcccgctaaaacgccagaacttgctgttctcggccacctttccgcctgctattctcaaa
gccagcgaggggttcctgatgaatccggtgcacgtgcgcaccgacgacaagcccgatcat
ccagataccgattcctggttcgtggctacggaagacgccgaccggttcgagaccactgcc
acactgctcaatgcctatcgtcccgtgtctacgctggccttttgcaacaccaaggcccaa
tgcgaggcgctgaccgattccctgctggagcgcggtatcgaagcgcgtaccctgcacggc
gatatggaccagcgcgatcgcgaagatgtgctggtcgattttatcgggcaaagctgctcg
gtgctggtggcgaccgacgtggcagccaggggtctggatattgccacgcttgacgcggta
attaatgtcgatatgtcgcccaacgcagaaacccatattcatcgcgtggggcgcactggc
cgggtcgccggccgaggcgggctggcgctcaccttgtgcacgcccaaagagaaatttcgc
gccgaacgcatcgaacaggcgctgggcaagccgctggcctggctggacatgaatacgctt
aaacgcgcgcgcggcgccttcacgcccccgatgcgcacgatctgcatccgtggcggcaag
aaggacaaactgcgcccaggcgatctgctgggggcacttaccaaagatctgggtctgcag
gccgatcaggtcggtaaaatcagcctttttgattttgtcgccttcgtggcaattgaccgc
agcattgccgaagatacgctgcagcgcctgagccagcgtcccatcaagggccgctcattc
cagatgcgctttctgagctga
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