Advenella kashmirensis: TKWG_04625
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Entry
TKWG_04625 CDS
T02117
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
aka
Advenella kashmirensis
Brite
KEGG Orthology (KO) [BR:
aka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aka03009
]
TKWG_04625 (rimO)
Enzymes [BR:
aka01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
TKWG_04625 (rimO)
Ribosome biogenesis [BR:
aka03009
]
Prokaryotic type
ribosomal protein modification factors
TKWG_04625 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Homeobox_KN
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AFK61456
UniProt:
I3U8W8
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Position
complement(802185..803513)
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AA seq
442 aa
AA seq
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MSAPRVGFVSLGCPKALVDSERILTQLRTEGYDISPSYEGADVVVVNTCGFIDSAKAESL
DAIGEAISANGKVIVTGCMGVEEQVIRQVHPRVLSVTGPQQYEEVVRAVHEAAPPSIEHD
PYVDLVPPQGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVGDVLQEAQRLAN
AGVKELLVISQDTSAYGVDIKYRSGFWNGRPVRTRMTELCEALSELGIWVRLHYVYPYPS
VDEVIPLMAQGKILPYLDIPFQHASPRVLKAMKRPAFEDRTLARIHKWRETCPDLTIRST
FIVGFPGETEEDFQYLLNWMTEAQLDRVGCFQYSPVEGAPANALGDHVPDDVKQDRWERF
MAHQQGISTARLARKVGREIDVLIDEIDEDGDAVGRSHADAPEIDGCVFISSAEKLQPGQ
IVRCTVTDSNEYDLWADHKPLS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctccccgcgttggctttgtcagtctgggctgcccgaaggcactcgttgactct
gaacgcatcctgacccagttgcgtactgaaggttatgatatttctccctcctatgaaggc
gccgacgtggtcgtggtcaacacctgtggcttcatcgacagcgccaaggccgaatcgctt
gacgcgatcggcgaggccatctccgccaacggcaaggtaatcgtgacaggctgcatgggt
gtagaggaacaggtcattcgccaggttcatcctcgcgtgctgtccgtgaccggcccgcag
caatacgaagaagtggtccgtgccgtccatgaagcggcccccccttcgatcgagcatgat
ccctatgtagacctggtgccgccacaaggcattaagctgacgcccaggcattatgcttat
ttgaaaatttccgaaggctgcaaccatcgctgcagcttctgtattatcccgtccatgcgc
ggcgacctggtcagccgcccggtgggcgatgtgctgcaagaagcgcaacgcctggccaat
gcaggggtcaaggaactgctggtcatttctcaggataccagcgcctacggggtagatatc
aaataccgtagcggattctggaacggacgccccgtacgcacacgcatgaccgaactgtgc
gaggcactgtccgaactgggtatttgggtacgtttgcattacgtttatccataccccagc
gttgatgaagtgatcccgctgatggcccaaggcaaaatcctgccgtatcttgatatcccg
tttcagcacgccagccccagggttctcaaggctatgaaacgcccagcctttgaagaccgc
acgttggcgcgcattcacaaatggcgcgaaacctgtccggacctgaccatccgctccacc
tttatagtggggttcccaggcgaaaccgaggaagacttccaatatctgctgaactggatg
acagaggcacagctggatcgcgttggctgtttccagtattcgccggtagagggcgcaccc
gccaatgcattgggcgatcatgtgcccgatgacgtcaagcaggaccgctgggagcgcttc
atggctcatcagcagggtatttctactgcccggctggcacgcaaggtgggacgcgaaatt
gacgttctgatcgacgagatcgatgaagacggcgatgccgtaggccgctctcacgcagat
gcgccggagatcgacggttgtgtgtttatcagcagcgctgaaaaactgcagcccggccag
attgtgcgctgtaccgtgaccgacagcaatgaatacgatctgtgggcagatcataaacca
ctatcatga
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