Advenella kashmirensis: TKWG_06255
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Entry
TKWG_06255 CDS
T02117
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
aka
Advenella kashmirensis
Brite
KEGG Orthology (KO) [BR:
aka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aka03016
]
TKWG_06255
Enzymes [BR:
aka01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
TKWG_06255
Transfer RNA biogenesis [BR:
aka03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TKWG_06255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AFK61706
UniProt:
I3U9L8
LinkDB
All DBs
Position
complement(1076487..1078373)
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AA seq
628 aa
AA seq
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MYVVFEDDGSFKAEKIHSEADSTLQVESASGKRSKIKRNAVIFTFDGIEPQAMLEQARAM
SEELDLQFLWECAPQDEFSAQDLARDYVGHEPSISEKTAILLRLHSAPAYFHRKGKGHYK
AAPADILQAALAALEKKQRQAEQQQAWTDAMLAGALPEELREAARTFLIRPDKNTLQWKA
FEKALAESGKTAETLLLELGVYPHALAVHMDRFLKQHFPKGTAVPELDIPPIPELPASDV
VAYSIDDISTTEIDDALSATHIEGDLYRIGVHIAAPALVVTRDSDLDKLARSRMSTLYMP
GDKIPMQSDTLISMFSLDAGKQVPALSLYITANVATGEIQETVTRAETITICENLRIDDL
VAQVTREALEEQTAALPYAELFRPLWKLGQHLKTAREQVRGKPENNNRTEYTFRLHGPAD
DPDSVIELIPRQRNAPLDQIVAEYMILANTQWGGYLNEHGLPGIYRSQQMGRARMSTHPL
PHESIGVPQYAWTTSPLRRYVDLVNQRQILAAAEHGVSARLVAPFKPKDADLYAIIGAFD
SQYMLWHEFQSRLERYWCLRWLTQQSRTRLHGSFIRDNLVRLEEIPLVIEVNGYPSLNAM
IALPLMYAAPMSCHCTLTPNMPGSPNQT
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtggtttttgaagacgacggcagcttcaaggctgaaaaaattcattccgaagcc
gattcgacgctacaggtcgaatcggccagcggtaaacgcagcaaaatcaagcgcaacgca
gtcatctttaccttcgatggcattgaaccacaggccatgctcgaacaggcacgggcgatg
agcgaagagcttgatctgcaatttctgtgggaatgcgcaccgcaagatgaattttcagcc
caggatctggctcgcgattatgtcggacacgaaccgtccatttccgagaaaacggccatt
ctgttgcgcctgcatagtgcacctgcctactttcatcgcaagggcaagggccattacaag
gcagcgccggctgacattttgcaggcagcgctggcggcactggaaaagaaacagcgtcag
gccgagcagcaacaggcctggaccgatgccatgctggccggcgcactgcccgaagagcta
cgcgaagccgcgcgtacattcctgattcgcccggacaaaaacacactgcagtggaaagcg
tttgagaaggcgctggccgaaagcggcaagaccgctgaaaccctgttgctggagctgggc
gtctatccgcatgcgctggccgtgcatatggatagatttctcaagcagcacttccccaag
ggaacggctgtgcccgagctggacatcccgcccatacccgagttgccagccagcgacgtc
gtggcctactccattgacgacatcagcacgacagagattgacgatgcgctgtcggcaacg
catattgaaggcgatctgtaccggattggcgtgcatattgccgccccggcactggtggtt
acgcgggattcggatctggacaaactggctcgcagtcgcatgtccacgctttacatgccc
ggcgataaaattcccatgcaaagcgatacgctgatcagcatgttctcgctggatgccggc
aagcaggtgcctgccctgtccctgtacatcacagccaatgtcgccaccggcgaaatccag
gaaaccgtcacgcgtgccgaaaccatcacgatttgcgaaaatctgcgcatcgacgatttg
gtggcgcaggtaacccgcgaggcgctcgaggagcagactgccgcccttccctacgccgag
ttattccggccgctctggaagctgggacagcacctgaagacagcgcgcgaacaggtacgc
ggcaaaccggaaaacaacaaccgcacggaatacacgtttcgtctgcacgggccggccgat
gatcccgattcagtcattgaacttatcccgcgacaacgcaatgcgccgcttgatcaaatt
gtggccgagtatatgattctggccaacacacagtggggcggatatctgaatgagcacggc
ttgcccggcatatatcgctcccaacagatggggcgggcgcgcatgtccacccatccattg
ccgcacgaatctatcggcgtaccccagtatgcatggaccacatcgccactgcggcgttat
gtcgatctggtgaaccagcggcagattcttgccgcagccgaacacggcgtgtctgcacgc
ctggtggcgccgttcaaacccaaggacgccgatctgtacgccatcatcggcgccttcgat
tcccaatacatgctctggcacgaattccagagccggcttgagcgctactggtgcctgcgc
tggctcacccagcagtcacgcacgcggttgcacggcagtttcatccgcgacaacctggtt
cgtcttgaagaaattccgctggtaatcgaagtcaatgggtacccgagcttgaacgcaatg
atcgcgttgccattaatgtacgcggcaccgatgagctgtcactgcacattgacgccgaat
atgccgggctcgcccaaccagacgtag
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