Advenella kashmirensis: TKWG_07080
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Entry
TKWG_07080 CDS
T02117
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
aka
Advenella kashmirensis
Brite
KEGG Orthology (KO) [BR:
aka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aka03016
]
TKWG_07080
Enzymes [BR:
aka01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
TKWG_07080
Transfer RNA biogenesis [BR:
aka03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
TKWG_07080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AFK61849
UniProt:
I3UA11
LinkDB
All DBs
Position
complement(1220394..1221818)
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AA seq
474 aa
AA seq
DB search
MQETSLKRGNAPAVATPVQEAPIRIHPSAKKLYIKTFGCQMNEYDSDKMADVLRENQGLE
LTSTPEDADVILLNTCSIREKAQEKVFSDLGRINQLKKKKPNLVIGVGGCVASQEGATII
RRAPYVDVVFGPQTLHRLPELIERRKNTGRAQVDISFPEIEKFDALPPARVDGPSAFVSI
MEGCSKYCSFCVVPYTRGEEISRPFEDVLTEIADLADQGVKEVNLLGQNVNAYRGTLGGT
AELADFAMLLDYVHDIPGIERIRYTTSHPKEMTSRLIEAHGRLPKLVPFLHLPIQTGSDR
ILAAMKRGYTGLEFKSIARRLYAARPGMTLSSDFIVGFPGETEADFEATLKLIADVNFDT
SFSFIYSRRPGTPAADLEDDTPYEVKLERLQRLQAQITAQASAISHGMLDTIQPVLVEGP
SRRDASELTGRTENNRIVNFAASEQLIGQIVNVRITAVYTNSLRGELASGDAAS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaacctcactcaagcgcggcaacgcgcccgctgtcgccacgcctgttcaggaa
gcgcccatccgtattcacccttctgccaaaaagctgtatatcaaaacgttcggctgccag
atgaacgaatatgattcggacaaaatggctgacgtattacgcgaaaaccagggactggag
ctgaccagcacgcctgaagatgccgatgtcattctgctcaatacctgttccatccgcgaa
aaggcacaggaaaaagtattttcggacctgggccgcatcaatcagctcaaaaagaaaaaa
cccaacctggtcattggcgtgggtggctgtgtcgccagccaggaaggcgccaccattatc
cggcgcgcaccctatgtagacgtggtattcggcccgcaaaccctgcatcgcctgcccgaa
ctcattgaacggcgcaaaaacaccggacgtgcccaggttgacatcagttttcctgaaatt
gaaaaattcgatgccctgccgccggcccgggtcgatggtccttcagccttcgtgtccatc
atggaaggttgcagcaaatactgcagcttttgcgttgtcccctatacccgtggcgaagaa
atctcccggccgtttgaagacgtcctgaccgaaattgccgatctggcagaccagggcgtc
aaggaagtcaatcttctgggccagaacgtcaatgcctatcgcggcaccctgggcggcact
gctgaattggctgatttcgccatgttgctcgattatgtgcatgacatcccgggtatcgaa
cgcattcgctatacaacctcgcaccccaaggaaatgaccagccggctgatcgaagcccat
gggcgcctgcccaagctggttcctttcctgcatctgcctattcagaccggaagcgaccgg
atcctggctgccatgaaacggggctacaccgggctggagttcaagtccatcgcccgccgt
ctgtatgccgcccggcccggcatgaccttgtcttcggacttcatcgtcggctttccaggt
gagaccgaagccgatttcgaggcgaccctcaagctaatcgcagacgtcaatttcgacact
tcgttctcgttcatctattcgcgccggccgggcacacccgccgccgacctggaagacgat
accccttacgaggtcaaactggaacggctgcaacgcctgcaggcccagattacggcacag
gccagcgccatcagtcatggcatgctcgacaccattcagccggtgctggtcgagggcccc
tcgcgccgtgatgccagtgaattgaccggccgcaccgaaaacaaccggattgtcaatttt
gctgcatccgagcagttgatcggccagattgtcaacgtacgcattaccgccgtatatacc
aactctctgcgcggcgagctcgcctccggagacgccgcttcatga
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