Advenella kashmirensis: TKWG_12310
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Entry
TKWG_12310 CDS
T02117
Name
(GenBank) ECF subfamily RNA polymerase sigma-24 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
aka
Advenella kashmirensis
Pathway
aka02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
aka00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TKWG_12310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aka03021
]
TKWG_12310
Transcription machinery [BR:
aka03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TKWG_12310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
PhyR_sigma-like
Sigma70_ECF
HTH_38
HTH_28
Trp_repressor
GerE
Xre-like-HTH
HTH_11
HTH_31
HTH_29
TnsD
HTH_32
HTH_40
HTH_Tnp_4
HTH_Tnp_ISL3
HTH_7
HTH_17
HTH_3
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AFK62627
UniProt:
I3UC89
LinkDB
All DBs
Position
complement(2135228..2135755)
Genome browser
AA seq
175 aa
AA seq
DB search
MAGSQSVLQREIHILYQDHHGWLYQWLHRKLGNRFDAADLAQDTFMRVLAGYRQDTIPVL
DEPRAYLTTVAKRLLINFYERQSLERAYEASLSLLPQQHVPGLEERAILLETLQELDGLL
DALPARVRTAFLLCQLEGMSYEQIAAHLQVSVRTVTRYMAQGFKQCLTLMLTQAA
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggccggtagccagtcagttttgcagcgggaaatccatatcctttaccaggatcatcat
ggatggctgtaccaatggctgcacagaaaactgggtaaccgctttgatgcagccgacctt
gcccaagacacatttatgcgggtattggctgggtatcggcaagatacaattccggtgctc
gatgagccccgtgcctacctgacgaccgtcgccaagcgcctgctgatcaatttttatgaa
cggcagtcgctggagcgtgcctacgaggcatcgttatcgttgctgccacagcagcatgtg
cctggcctggaagagcgtgcgattcttctggaaacattgcaggagcttgatgggctgctg
gatgcattacccgctcgcgtgcgcacggcgtttctgctatgtcaactcgagggtatgagc
tacgagcaaattgcggcacatctacaggtgagtgtacgtacagttacgcgctacatggcg
caaggtttcaaacaatgcctcaccttgatgctgacgcaagcggcgtga
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