Advenella kashmirensis: TKWG_15450
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Entry
TKWG_15450 CDS
T02117
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aka
Advenella kashmirensis
Pathway
aka03030
DNA replication
aka03430
Mismatch repair
aka03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TKWG_15450 (dnaE)
03430 Mismatch repair
TKWG_15450 (dnaE)
03440 Homologous recombination
TKWG_15450 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aka03032
]
TKWG_15450 (dnaE)
03400 DNA repair and recombination proteins [BR:
aka03400
]
TKWG_15450 (dnaE)
Enzymes [BR:
aka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TKWG_15450 (dnaE)
DNA replication proteins [BR:
aka03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TKWG_15450 (dnaE)
DNA repair and recombination proteins [BR:
aka03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TKWG_15450 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AFK63092
UniProt:
I3UDK4
LinkDB
All DBs
Position
complement(2664010..2667474)
Genome browser
AA seq
1154 aa
AA seq
DB search
MVDGTARISELVAAAAAYSQPAIALTDLSNLFGLIKFYKAARGKGIKPIAGCDVWLANEQ
DRDKPFRALLLVQNRQGYLALCEVLSRAWTANQYKGRAELQREWLENQPGLIMLSGGMAG
DVGQALLAGRVDQAEALARRWAAWFPRSYFIELQRTGPQADERYVQLAMQLAARLDLPVV
ATHPVQFTRPEDFRMHEARVCISDGELLGNKSRTRRFSEDQYVLSSAQMASKFADVPSAI
ANTVEIARRCSLTLSLGKPHLPDFPTPDNSSLDEYLVKLSEEGLEIRLKQLYPDDQEREK
ARPAYQDRLKLECKTIIGMGFPGYFLIVADFINWGKQNGVPVGPGRGSGAGSLVAYALGI
TDLDPLRYDLLFERFLNPERVSMPDFDIDFCQDNREKVIEYVKEKYGRDAVSQIATFGTL
GAKAVVRDVGRVLELPYSLCDGLSKLIPFNPANPWSLAKTLEEEPEFRRRYDNDEEVKAI
VDLARPLEGLTRNVGMHAGGVLIAPGKLTDFCPLYCQPGSDTSVVSQYDKDDVEAAGLVK
FDFLGLRNLTILDWAVRYVRRFNPSMRDFDIMSLSLDDPGAYRILCEGNTTAVFQLEGRG
MKELLKKLLPNTFEDIIAVLALYRPGPLESGMVDDFVNRKHGRAEVDYFHPSLESTLRST
YGVIVYQEQVMLISQIVGGYSLGGADLLRRAMGKKKAEEMAKHRELFEKGAVEKGYDGDL
AVRLFDLMEKFAGYGFNKSHSAAYALISYQTAWLKAHHPAEFIAATMSSDMDDTDKVQIF
WRDALDNGVAVLPPDVNESVYRFEPVEDDAMRAGKPPRTIRFGLGAVKGTGQGAVEEILR
AREAGGPFLDLYDFCKRVNRHTVNRRTMEALIRAGAFDELERNRAALLAALTHAIDAADQ
ADRSADQVSLFGDDSGAIVQDQVARVPPWNLHTELIEEKNALGFYFSHHLFDVWRDEVRR
FAPTKLSGINESRDAQWVAGVLIGQRFFASNRKSPGQPEADDRLYFLLLDDGSAQVEIMC
PGSVYELNRHILKSDSLVIARIKAKVNRFNGGLRISADSLYDLQKAREERARCLQIEIAD
GMSVSMLKSLLNPYRAEPENGIPGVRVQLSYVSARQGYKCDIELGEEWRVRMADSLFERL
REHQQSGSVEVSYS
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
gtggtggacgggaccgcgcgcatcagcgaactggtggccgccgctgccgcctattcgcaa
ccggccattgcgctgaccgatttatccaatctgtttggcctgatcaagttctacaaggca
gcccggggcaagggtatcaaacccattgccggatgcgatgtgtggctggccaatgagcaa
gaccgcgataagccatttcgcgcactgttgctggtgcagaaccgccaggggtatctggcc
ctgtgcgaagtgctctcacgcgcctggactgccaatcagtacaagggcagggcagaattg
cagcgtgagtggctggagaatcagccaggcctgattatgctttccggtggcatggctggc
gacgttggccaggcattacttgccgggcgggtagaccaggccgaagcgctggcacgccgc
tgggccgcatggtttccacgctcctattttattgaattgcagcgtaccggcccgcaagcc
gatgagcgctatgtgcagctggccatgcaactggcggcccggctggacctgccggtggtt
gcgacgcatccggtacagttcacccggccggaagacttccggatgcacgaagcgcgcgtc
tgtatttcagacggcgagctgttgggcaacaaatcgcgcacccgccgcttttcagaagac
cagtatgtgctcagttcggcacagatggccagcaagtttgccgatgtgccttcagccatc
gccaatacggttgaaattgcccgtcgctgttcgctcacgttgtcgctgggcaaaccgcat
ctgccagattttccgacacctgacaacagttcgctggacgagtatctggtcaaactgtcc
gaagaaggcctggaaatacgcttaaagcaactgtatccggacgaccaggagcgcgaaaag
gcgcggcccgcatatcaggaccggctcaaactggaatgcaagaccatcattggcatgggg
tttcccggctactttctgatcgtggcggacttcatcaactggggcaagcagaacggcgtg
ccagtgggcccggggcgcggctccggtgccggttcgctggtggcctatgccttgggcatt
accgatcttgatcccttgcgctacgatttgctgttcgaacggttcctgaaccccgaacgg
gtatccatgcctgacttcgatattgacttctgtcaggataatcgcgagaaggtgattgag
tacgtcaaggaaaaatacgggcgcgatgcggtcagccagattgccacatttggtacgctg
ggagccaaggcggtggtacgcgacgtgggcagggtattggagctgccatattccctgtgt
gatgggctgtccaaactgattccattcaatccggccaacccctggagtctggccaagacg
ctggaagaagaaccggaatttcgtcgtcgttacgataatgacgaagaggtcaaggcgatc
gtggatctggcgcgaccgctggaaggcctgacccgcaacgtcggcatgcacgccggtggc
gtgctgatcgcgccgggcaaactgaccgatttttgcccgctgtattgtcagccaggcagc
gataccagtgtggtttcccagtatgacaaggacgacgtcgaggccgcaggcctggtcaaa
ttcgactttctgggcttgcgcaacctgaccattctggattgggcggtacgctatgtgcgg
cgcttcaatccgagcatgcgcgactttgacatcatgtcgctgtcgctggatgatccggga
gcctatcgcatcttgtgcgagggcaatacgacggcggtgttccagcttgagggccggggc
atgaaggagctgctcaaaaagctgctgcccaatacgtttgaagacattattgcggtgctg
gccctgtatcgtcccggtcccctggagtcgggcatggttgatgacttcgtcaaccgcaag
cacgggcgcgccgaggttgattatttccatccctcgctggagtctacgctgcgcagcacc
tacggcgtgatcgtataccaggaacaggtgatgttgatttcccagattgtaggcggctac
agtctggggggcgccgatctgctgcgccgtgccatgggtaagaaaaaggccgaggaaatg
gccaagcatcgcgagctgtttgaaaaaggcgcggtggaaaaaggctatgacggtgatctg
gcggtgcgcctgtttgacctgatggaaaaattcgccggctatggtttcaacaaaagtcac
tcggccgcctatgcactcatttcctatcagacggcgtggctcaaggcgcatcatcccgcc
gaattcattgccgcgaccatgtcctcggatatggacgacaccgacaaagtacaaatcttc
tggcgcgatgcgctggacaatggcgttgccgtgctgccgcctgatgtgaacgaatcggtt
taccgcttcgaaccggtagaggacgatgccatgcgcgcgggcaaaccgccgcgcaccatt
cgctttggcctgggcgccgtcaagggcaccggccagggcgccgtcgaagagattcttcgg
gcacgcgaggcaggcgggccgtttctggacctgtacgacttctgcaagcgcgtcaatcgc
cacaccgtcaatcgccgtaccatggaagcgctgattcgcgccggcgcgttcgacgaactc
gaacgcaaccgcgccgcgctgctggccgcgttaacgcatgccatcgatgcagccgaccag
gccgaccgcagcgccgaccaggtctccctgttcggtgacgattcgggcgccatcgtgcag
gaccaggttgcccgtgtgccgccctggaatctgcataccgagctcatcgaagaaaagaat
gcgctcggtttttatttcagtcatcatttgtttgatgtctggcgcgacgaggtgcgccgg
tttgcgcccaccaaactgtctggcatcaacgagtcacgcgatgcgcaatgggtggcaggt
gtgctgatcgggcagcgattctttgccagtaaccgcaagagcccaggccagcccgaagcc
gatgatcgcttgtatttcctgttgcttgacgatggctcggcccaggtggaaatcatgtgc
cccggcagcgtgtatgagctcaatcgccatattctgaaaagcgatagcctggtcattgcg
cggatcaaggccaaggtcaatcgcttcaatggcgggctgcgcattagtgcagacagcctc
tatgatttgcaaaaagcgcgcgaggagcgggcccgctgcctgcaaattgaaattgcagat
ggcatgtcggtcagcatgctcaagtctttgctgaatccttaccgcgctgaacccgagaat
ggtatcccgggcgtgcgcgtgcaactgagttatgtgtcagcccgccagggctataaatgc
gatattgaactgggtgaggaatggcgcgtgcgcatggccgacagcctgtttgaacgactg
cgcgaacatcagcagtctggttccgtagaggtaagctactcgtga
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