Advenella kashmirensis: TKWG_15820
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Entry
TKWG_15820 CDS
T02117
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
aka
Advenella kashmirensis
Pathway
aka03030
DNA replication
aka03430
Mismatch repair
aka03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TKWG_15820 (holA)
03430 Mismatch repair
TKWG_15820 (holA)
03440 Homologous recombination
TKWG_15820 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aka03032
]
TKWG_15820 (holA)
03400 DNA repair and recombination proteins [BR:
aka03400
]
TKWG_15820 (holA)
Enzymes [BR:
aka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TKWG_15820 (holA)
DNA replication proteins [BR:
aka03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TKWG_15820 (holA)
DNA repair and recombination proteins [BR:
aka03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TKWG_15820 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AFK63141
UniProt:
I3UDQ3
LinkDB
All DBs
Position
2728296..2729357
Genome browser
AA seq
353 aa
AA seq
DB search
MAGQTPNYERFIADLGKPDVQLHPLYVISGDELLLRNEALDALRAACRLQGYTERVTLSL
TATGPWNAIEENTQSISLFGDRKLMELELPTGKPGKTGGDALVSLANRAARQELTDISVV
LILPRADRTISSAKWYTAVTQHAVLVNTPVISREQLPAWIQGRLKRQKQHADPATLAWIT
DKVEGNLLAAHQEILKLGLQYPEGELTLEEVESAVLDVSRYNVFDMSHAILRGDGQRALK
VLHGLQAEGEALPMVLGLLTYDIRNLYTLAQARQNGHNPRNLTRKLGLFPPKDQLILNTL
DRLPFSQIMGLIQHAHDIDRLFKGFPADGRLTDAWQEMARLVLRMADTTASSH
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacaaaccccaaactacgaacgcttcattgccgatctgggtaagccggatgtg
cagttgcacccgctgtatgtgatcagcggcgacgaattactgttgcgcaacgaagcgctg
gacgcattgcgcgcagcctgtcggcttcagggctataccgaaagggtcacactcagcctg
acggccaccggcccatggaatgccatagaagagaacacccagtccatttccctgttcggc
gatcgcaagctgatggaacttgaactgcccaccggcaagcccggcaaaaccggcggcgac
gcactggtctcgctggccaatcgcgccgcaaggcaggaattgaccgatatttccgttgtc
ctgattctgccacgggcagacaggaccatatcctctgcaaaatggtataccgccgtaacg
cagcacgctgtgctggtcaatacgccagtcatcagccgcgagcaattgcccgcctggatt
cagggccggctcaagcgccagaagcagcacgccgatccagcaaccctggcgtggattacc
gataaggtcgaaggcaatctgctggcggcgcatcaggaaatcctcaagctgggcttgcaa
tatcctgaaggcgaattgacgctggaagaagtggaaagtgccgttctggacgtgagccgc
tataatgtctttgacatgagtcatgccattttgcgcggcgatggtcagcgcgcgctcaag
gtgctgcatgggttgcaggccgagggcgaggcgttgccaatggtgctgggcctgcttact
tatgacattcgtaatctttatacacttgctcaggcaaggcagaacggacacaatcccagg
aacctgacgcgcaagctcggtctgtttccgcccaaggatcagctgatcctcaatacgctg
gaccggctgcccttttcgcagattatgggcttgatccagcacgcccacgacattgatcgt
ctgttcaagggttttcctgctgacggaagactgaccgacgcctggcaggaaatggcccga
ctcgttctgcgtatggcagacacgaccgcatcctctcactga
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