Advenella kashmirensis: TKWG_19275
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Entry
TKWG_19275 CDS
T02117
Name
(GenBank) putative Ku domain-containing protein
KO
K10979
DNA end-binding protein Ku
Organism
aka
Advenella kashmirensis
Pathway
aka03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
TKWG_19275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aka03400
]
TKWG_19275
DNA repair and recombination proteins [BR:
aka03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
TKWG_19275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Saf4_Yju2
Motif
Other DBs
NCBI-ProteinID:
AFK63668
UniProt:
I3UF80
LinkDB
All DBs
Position
complement(3318430..3319647)
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AA seq
405 aa
AA seq
DB search
MLQDSRCVWRIDDLEQGPDMARPIWNGTLSFGLLNIPVALMPGERRIDLHFRMLDSRDKA
PVRYERVNADTGEEVPWKDIVKAFEYSKGNYVVLEPDDIRDAAPQSKESVDVEAFVDASA
IGPAYFEKPYVLVPGKKAEKGYVLLRETLRDAGKIGIARVVIRTREYLCAVMPQDDALML
ILLRYPQELIDVQDYRIPEGKLSDYRISSQEMDMASQLITSMGAEWKPEQYKDEFRQRLS
DVIKKRMKANKVSHRPEDELEDAAVPENAATNVVDFMSLLKQSLATNKRTPPKAAKSSPA
ARGSDSAAGKASKKASAKSAARAAGRKSTTDNGKTARGKTAGKAAKSTTTARKTAKQHQR
KAPVLPDPAHASVRAAPKRRPSAHFPTLLTGGAYEPCRLSAQTQV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
ttgctgcaggactcgcgctgcgtttggcgcattgatgatcttgaacaaggacctgatatg
gcacgcccgatctggaatggtacgctttcttttggactattgaatatacccgtggcgtta
atgccaggggagcgacgcattgatctgcattttcggatgctggactcgcgtgacaaggcg
ccggtgcgatacgagagggtcaacgccgataccggcgaagaggtgccgtggaaagatatc
gtcaaggcatttgaatatagcaaaggcaattatgtggtgctggaacccgacgatattcgc
gatgcagcgccgcaaagcaaagagtcggtcgatgtagaggcttttgtcgacgccagcgct
atcggcccggcgtatttcgaaaaaccctatgtgctggtgccgggaaaaaaggcggaaaaa
ggatatgtgctgttgcgcgagacactgcgtgatgccggcaagatcggaatagcacgtgtg
gtcatacgcacgcgtgaatatctgtgtgccgtgatgccgcaagacgatgcgctcatgctg
attctgctgcgctatccgcaggagttgattgatgtgcaggactaccggattccggaaggc
aagttgagcgactaccggatttccagccaggaaatggacatggccagtcaattgattacg
tccatgggcgcggaatggaaaccagagcagtacaaggacgagttccggcagcggctttca
gatgtgataaaaaagcggatgaaagccaacaaagtcagccaccgacctgaagacgaactg
gaagacgctgcagtaccggagaatgctgccactaacgtggtcgactttatgtcgctgctc
aagcaaagcctggcaaccaataaacgaacaccacccaaggcggccaaatccagtcctgca
gcacgaggcagcgacagtgcggcaggcaaagcgagcaaaaaggcttcagcaaaatcagcg
gccagagcggcggggcgcaagagcacaacggataacggtaaaacagcccgaggtaaaacg
gcaggcaaggcagccaaatcaacaacgactgccagaaaaactgccaagcaacaccaaaga
aaagcgccggttcttccggatccggctcacgcaagcgtgcgggcagcaccaaaaaggcgg
cctagcgcgcattttccaacactactgaccgggggcgcctatgagccttgccgactatca
gcgcaaacgcaggtttga
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