Arthrobacter koreensis: N9A08_06715
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Entry
N9A08_06715 CDS
T09441
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ako
Arthrobacter koreensis
Pathway
ako03030
DNA replication
ako03430
Mismatch repair
ako03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ako00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N9A08_06715 (dnaE)
03430 Mismatch repair
N9A08_06715 (dnaE)
03440 Homologous recombination
N9A08_06715 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ako03032
]
N9A08_06715 (dnaE)
03400 DNA repair and recombination proteins [BR:
ako03400
]
N9A08_06715 (dnaE)
Enzymes [BR:
ako01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N9A08_06715 (dnaE)
DNA replication proteins [BR:
ako03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N9A08_06715 (dnaE)
DNA repair and recombination proteins [BR:
ako03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N9A08_06715 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
UYB37327
LinkDB
All DBs
Position
1457856..1461395
Genome browser
AA seq
1179 aa
AA seq
DB search
MASATGTSKSFVHLHNHTEYSMLDGAARLTDLFSHADELGMNALATTDHGFVFGAFDFWN
KARNSGIKPIIGVEAYLTPGTARQDKTRVKWGGGGRDDVSGAGAYTHMTMWAESTEGMHN
LFRMSSLASLEGYLYKPRMDRDLLQTYGKGLIATTGCPSGEVQTKLRLGLYNEAKQAASD
FRDIFGKENFFCELMDHGLDIERSVQADLIKLARELDLPLVATNDLHYTHAEDAKAHAAL
LCVQSGSTLADPKRFKFDADEFYLKSPAEMRAMFRDYPDACDNTLLIAERCDVEFNTKAS
YMPRFPCPPGENEESWFVKEVETGLQYRFPNGIPDDVRKQAEYEIGIITQMGFPGYFLVV
ADFINWAKNNGIRVGPGRGSGAGSMVAYAMRITDLNPLAHGLIFERFLNPDRVSMPDFDV
DFDDRRRSEVIHYVTEKYGADRVSMIVTYGTIKAKQALKDSSRVMGYPFSVGERLTKAMP
PDVMGKGISLTDVHNKEAKRYGEAEELRELLATDPDSQRVFETAIGLEGLKRQWGVHAAG
VIMSSHPLIDIIPIMKREQDGQIITQFDYPTCEGLGLIKMDFLGLRNLTIISDAIENIKL
NKDVDLDLEKLELDDKESYELLARGDTLGVFQLDGGPMRSLLKLMRPDNFEDISAVIALY
RPGPMGANSHTNYALRKTGVQEITPIHPELEEPLKEILDTTYGLIVYQEQVMAIAQKVAG
FSLGQADILRRAMGKKKKSELDKQYAGFHGGMVERGYSEAAIKALWDILLPFSDYAFNKA
HSAAYGLVSYWTAFLKAHYPTEYMAALLTSVGDDKDKLAMYLNECRKMGITVLPPDVNES
SVNFTPVGKDIRFGMGAIRNVGTNVVQAMVGAREEKGAYTNFKDFLMKVPAVVCNKRTIE
SLIKAGAFDSMGHARRPLAMIHEEAIDSVVVLKRNEAVGQFDLFAGMGESEPEDSISIDI
PDLPEWEKKDKLSFERDMLGLYVSDHPLQGLEGILSQHADSSITSIVSEEGPPDGSIVTI
AGMITSLQRRIAKNSGNAYARCEIEDLAGSMEVMFFGQVYGPIAAVLAEDLIVVVRGRLQ
RRDDGAVTLNAQELTVPDLSEGHSGPVVISMATYKATETVVTQLGDVLRTHPGTSEVQIR
LNGNRTVEVMKLGVDLRVNPTPSLFGDLKVLLGPACLDA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtggcttcagcaactggtacgtctaaatcgtttgtccaccttcacaatcacaccgaatac
tcgatgctggacggggcagcgcgcctgaccgacctgttcagccacgccgatgagctgggc
atgaatgccctggccaccacggaccatgggttcgtcttcggtgcgttcgacttttggaac
aaggcacggaactccggcatcaagccgatcatcggcgttgaggcctacctgactccgggc
accgcccgtcaggacaagacccgtgtgaagtggggcggcggcggacgcgacgacgtctct
ggtgccggtgcctacacccacatgaccatgtgggccgagagcaccgaaggcatgcacaac
cttttccggatgtcttcgctggcctcgctggaagggtacctctacaagccgcgcatggac
cgggacctgctgcagacctacggcaagggcctgatcgccaccaccggctgtccgtccggc
gaagtgcagacgaagctgcgcctgggactctacaacgaagccaagcaggcggcgtcggac
ttccgggacatcttcggcaaggaaaacttcttctgcgaactcatggaccacgggctggac
atcgagcgcagcgtacaggcggacctgatcaagctggcacgcgaactggacctgccgctg
gtagccaccaatgacctccactacacgcacgccgaggacgccaaggcgcatgccgcgctg
ctgtgcgtgcagtccggttccacccttgccgaccccaagcggttcaagttcgacgccgac
gagttctacctcaagtccccggcggaaatgcgggccatgttccgcgactaccccgacgcc
tgcgacaacaccctgcttattgccgagcgctgcgacgtcgagttcaacaccaaagccagc
tacatgccgcgcttcccctgcccgccgggggagaacgaggaatcctggttcgtcaaggaa
gtcgaaaccgggctgcagtaccgtttcccgaacggcatcccggacgacgtccgcaagcag
gcggaatacgaaatcggcatcatcacccagatgggcttcccgggctacttcctggtggtt
gccgacttcatcaactgggccaagaacaacggcatccgcgtgggtccgggccgcggctcc
ggtgcaggttcgatggtcgcgtacgccatgcgcatcaccgacctgaatcccctggcgcac
ggtctgatcttcgaacggttcctcaacccggaccgtgtgtcgatgcctgacttcgacgtc
gacttcgatgatcggcgccgctccgaggtgatccactacgtcaccgagaagtacggcgcg
gaccgggtgtccatgatcgtcacctacggcaccatcaaggccaagcaggcgctgaaggac
tcctcccgcgtcatgggctaccccttctccgtcggtgaacgcctcaccaaggcaatgccg
ccggacgtcatgggcaagggcatctccctgaccgacgtccacaacaaggaagccaagcgc
tacggcgaagccgaagagctgcgcgagctgctggccacagatccggattcccagcgcgtc
ttcgaaaccgcgatcggcctggaagggctgaagcgccagtggggcgtgcacgccgccggc
gtcatcatgtcctcgcatccgctgatcgacatcatcccgatcatgaagcgggagcaggac
ggccagatcatcacgcagttcgactacccgacctgcgaaggcctcggcctgatcaagatg
gacttcctcggcctgcggaacctgaccatcatttcggacgcgattgagaacataaagctc
aacaaggacgtagacctcgaccttgagaagctggagctcgatgacaaggagtcctacgaa
ctcctggcccgcggtgacaccctgggcgtgttccagctcgacggcgggcccatgcggtcc
ctgctgaaactgatgcgcccggataacttcgaagacatttccgctgttatcgcgctgtac
cggccgggccccatgggtgcgaactcgcacaccaactacgccctgcgcaagaccggcgtc
caggagatcactccgatccaccccgagctggaagaaccgctcaaggagatcctggacacc
acctatggcctgatcgtctaccaggaacaggtaatggcgatcgcccagaaggtggccggc
ttctcgctcggccaggcagacatcctccgccgtgccatgggcaagaaaaagaagtccgag
ctggacaagcagtacgcaggcttccacggcggcatggtggagcgcggatactcggaggct
gccatcaaggccctctgggacatcctgctcccgttctccgactacgccttcaacaaggca
cactccgccgcgtacggactggtctcctactggaccgcgtttctgaaggcgcactatccc
accgaatacatggcagccctgctcacttccgtgggtgatgacaaggacaagctggccatg
tacctgaacgaatgccgcaagatgggcattacggtgctgccgccggacgtcaacgagtcc
tcggtgaacttcaccccggtgggcaaggacatccgctttggcatgggcgccatccgcaac
gttggcaccaacgtggtccaggcgatggtgggtgcccgggaggaaaagggcgcttacacc
aacttcaaggatttcctgatgaaggttcctgccgttgtctgcaacaagcgcaccatcgaa
tcgctgatcaaggccggcgccttcgactcgatgggccacgcccggcgtccgctggccatg
atccacgaagaagccatcgactccgtggtggtgctcaaacgcaacgaggcagtcggccag
ttcgacctgttcgcgggcatgggggagtccgagccggaagattcaatctccatcgatatc
ccggacctccccgagtgggagaagaaggacaaactgtccttcgaacgggacatgctgggc
ctgtacgtctccgaccacccgctccagggcctggaaggaatcctcagccagcacgcggac
tcctccatcacctcgatcgtcagcgaggaaggcccgccggacggatcgatcgtgaccatc
gccggcatgatcacctcgctgcagcgccgcatcgccaagaacagcggcaacgcctacgcc
cgctgcgagattgaggacctcgccggttccatggaagtcatgttcttcggccaggtctac
ggccccatcgccgccgtgctggcagaggacctgatcgtcgtcgtacgcggacgcctgcag
cggcgcgatgacggcgcggtgacgctcaacgcccaggaactgactgtcccggacctcagc
gagggccattccggtccggtggtgatttcgatggccacctacaaggccaccgaaaccgtg
gtgacccagctcggtgacgtgctgcggacccatcccggaacctccgaggtacagatccgg
ctcaacggcaaccgcactgtcgaagtcatgaaactcggcgtggaccttcgggtgaacccc
acgccgtccctcttcggtgacctcaaggtgctgctgggaccggcgtgcctggatgcctag
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