Arthrobacter koreensis: N9A08_12675
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Entry
N9A08_12675 CDS
T09441
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ako
Arthrobacter koreensis
Pathway
ako03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ako00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N9A08_12675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ako03019
]
N9A08_12675
03009 Ribosome biogenesis [BR:
ako03009
]
N9A08_12675
Enzymes [BR:
ako01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N9A08_12675
Messenger RNA biogenesis [BR:
ako03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N9A08_12675
Ribosome biogenesis [BR:
ako03009
]
Prokaryotic type
rRNA helicases
N9A08_12675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
UvrA_inter
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UYB37693
LinkDB
All DBs
Position
complement(2746899..2748749)
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AA seq
616 aa
AA seq
DB search
MEAEVLFSDFNLDARILAALTDVGYKNPSPIQAATIPVLLEGRDVVGLAQTGTGKTAAFA
VPALSRMAELAEVNGPTKDTQILVLAPTRELALQVAEAFTSYAVHMDDFTVLPVYGGSPY
GPQLAGLRRGAQVVVGTPGRVIDHISKGSLDLSNLQYLVLDEADEMLRMGFAEDVEQILS
STPDEKQVALFSATMPGAIRKIAKKYLNDPAEITVKSKTTTGANTRQRYVQVMGPHKLDA
MSRILETEDFDGVIAFVRTKMATEDLADKLKSRGYKAAAINGDIPQQQRERTVEALREGK
IDILVATDVAARGLDVERISHVFNYDIPHDTESYVHRIGRTGRAGRTGDAILFMTPREKY
LLRAIEKATRQPVEHMQLPGVDVVNAKRLAKFSERITETRNSEDLSVFRELVTKYIAENE
VPAEEIAAALAVMAQGGRPLLMEEIPQAPARQRERAEGRNDGFGSRGPTRPLTEGNATYR
IAVGRRQRVMPGSIVGAIANEGGLSSSQIGGIDIRADHTLVELPADLSKDQLRALSRTRI
GGELIHLELDKGRRPAREGGSYDRADRGFKKDFKKRDGERSFGDRGSDRPYKKKFDGDRS
FGKPAGAGARKPRFRD
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atagaagctgaggtcctgttctccgatttcaacctggatgcccgcatcctcgccgcgctg
accgacgtcggctacaagaacccttcgcctatccaggctgccaccatccccgtcctgctt
gaaggccgcgacgtcgtaggcctggcccagaccggcaccggcaagaccgccgccttcgct
gtccccgccctgtcccgcatggcggagctggccgaggtcaacggacccaccaaggacacc
cagatcctcgtgctggctccgacccgtgaactcgccctgcaggtagccgaggccttcacc
tcctacgccgtgcacatggatgacttcaccgtgctgcccgtctacggcggttccccctac
ggcccccagctcgccggcctccgccgcggtgcgcaggttgttgttggaacgccgggccgc
gtcatcgaccacatctccaagggttcgctggacctgtccaacctgcagtacctcgtcctg
gacgaagccgacgaaatgctgcgcatgggcttcgccgaagacgttgagcagatcctctcc
agcaccccggatgagaagcaggttgccctcttctccgccaccatgcccggtgccatccgc
aagatcgccaagaagtacctgaacgatccggcagaaatcaccgtcaagtccaagaccacc
accggcgccaacacccgccagcgctacgtgcaggtcatgggtccgcacaagctcgacgca
atgtcccgcatcctcgagaccgaagacttcgacggcgtcatcgccttcgtgcgcaccaag
atggccaccgaggacctggcggacaagctgaagtcccgcggctacaaggcagcagcgatc
aacggcgacatcccgcagcagcagcgtgagcgcaccgtcgaggcgcttcgcgagggcaag
atcgacatcctcgttgccaccgacgtcgcagcacgcggcctggatgttgagcgcatcagc
cacgtcttcaactacgacatcccgcacgacaccgagtcctacgtgcaccgcatcggccgt
accggccgtgcaggccgcacgggcgacgcgatcctgttcatgaccccgcgcgagaagtac
ctgctgcgcgccatcgagaaggcaacgcgccagcccgttgagcacatgcagctgcccggt
gttgacgttgtcaacgccaagcgcctggccaagttctccgagcgcatcaccgagacccgc
aactccgaagacctctccgtcttccgtgagctggtcaccaagtacatcgccgagaatgag
gttcccgccgaggaaatcgccgccgcgctggccgtcatggcccagggcggacgcccgctg
ctgatggaagaaatcccgcaggcaccggcccgccagcgcgagcgtgccgaaggccgcaac
gacggcttcggctcgcgcggcccgacgcgcccgctgaccgaaggcaacgcaacgtaccgc
atcgccgtcggccgccgccagcgcgttatgccgggctcgatcgtcggtgccatcgcgaat
gagggcggcctgtcctcctcgcagatcggcggcatcgacatccgcgccgaccacaccctc
gtggaacttcccgcggacctgtccaaggaccagctgcgtgcactgtcccgcactcggatc
ggtggcgaactgatccacctggaactggacaagggacgccgtccggcccgtgaaggcggc
tcctacgaccgcgccgaccgcggcttcaagaaggacttcaagaagcgcgacggcgagcgg
tccttcggtgaccgcggctcggaccgcccgtacaagaagaagttcgacggcgaccgcagc
ttcggaaagccggccggtgccggtgcccgcaagccgcgtttccgcgactag
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