Acinetobacter larvae: BFG52_04215
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Entry
BFG52_04215 CDS
T04708
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ala
Acinetobacter larvae
Pathway
ala02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ala00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BFG52_04215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ala03021
]
BFG52_04215
Transcription machinery [BR:
ala03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFG52_04215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
TMPIT
Motif
Other DBs
NCBI-ProteinID:
AOA57637
UniProt:
A0A1B2LXG7
LinkDB
All DBs
Position
complement(944777..946672)
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AA seq
631 aa
AA seq
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MSDMHSPTSQVAALISRGKEQGYLTYAEVNDHLPDSITESEQIEDIIQMLQDVGIPVHER
APESDDAMFEDNAETADEVAEEEAAAVLASVENEPGRTTDPVRMYMREMGTVELLTREGE
ISIAKRIEEGIRDVLNAIAYWPNAVEVVLNEYNDYVNGERRLADILSGYLDPENNDVIPE
VIDDEAELENKAASSKAASKKDVKLDDDEEEEEEEAETDDDSEADSGPDPEVAKMRFDEL
TAAWQNTKTAIAAHGRNSPEAQTAMEGLATIFMMFKFTPRLFDLIAEMIRGTHEQIRRSE
REVMRYAVRRGRMDRTQFRTTFPGQESNPAWLDEQIAKTPAETQSYLQKVRPDILAFQQN
IADIEKELNLSVKDIKDISKRMAIGEAKARRAKKEMIEANLRLVISIAKKYTNRGLQFLD
LIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKI
NRVSRQLLQEMGREPTPEELGERLEMDEIKVRKVLKIAKEPISMETPIGDDEDSHLGDFI
EDSNITSPVDAATSEGLKEATREVLENLTEREAKVLKMRFGIDMPTDHTLEEVGKQFDVT
RERIRQIEAKALRKLRHPSRSEHLRSFLEND
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatgcattcccctacttctcaggtagcggctctgattagccgaggcaaagaa
caaggttacttaacctacgctgaggttaacgatcatcttccagactccatcactgaaagc
gaacagattgaagacattattcaaatgcttcaagacgttggtattcctgttcatgaacgc
gcgccagaatctgacgatgcaatgtttgaggacaatgctgaaacagctgatgaagtcgcc
gaagaagaagctgctgcggtattggcctctgttgaaaacgaaccaggtcgtaccacagac
ccagttcgcatgtatatgcgtgaaatgggtactgttgaactgctcacgcgtgaaggcgaa
attagcatcgctaagcggatcgaggaaggtattcgtgatgtactcaatgcaatcgcttac
tggccgaatgctgttgaggtggttctgaatgaatataatgattatgtcaatggcgaacgc
cgtttggccgatattttatctggttatttagacccagaaaacaacgatgtcattccagaa
gtgattgacgatgaagcagagttagaaaacaaagcagccagtagcaaggcagccagcaag
aaagacgtcaaattagacgatgacgaagaagaggaagaagaggaagccgaaactgatgat
gattcagaagcggattctggtcccgatcctgaagtcgctaaaatgcgttttgatgaacta
actgctgcatggcaaaataccaaaacagcaattgccgcacatggtcgtaatagccctgaa
gcgcaaacagcaatggaaggtttagcgaccatctttatgatgttcaaatttactccccgt
ttatttgacctgattgcagagatgattcgtggtacccatgagcaaatccgtcgttctgaa
cgtgaagtcatgcgttatgcggtacgtcgtggtcgtatggaccgtacacaattccgaacc
accttccctggtcaagaatctaacccagcatggctggatgaacaaattgccaaaacacct
gctgaaacgcaaagttacctgcaaaaggttcgtccagatattttggctttccaacaaaat
attgctgacattgaaaaagaacttaatctaagcgttaaagatatcaaagacatttccaaa
cggatggccattggtgaagccaaagctcgccgtgccaagaaagaaatgatcgaagccaac
ttacgtttggtgatttctattgcgaaaaaatataccaaccgtggtctacaattcttggat
ctaatccaagaaggcaacattggcttgatgaaagcggttgataaatttgaataccgccgc
ggatataagttctcaacctatgcaacgtggtggattcgtcaagcgattacacgttcgatt
gccgaccaagcgcgtaccattcgtattccagtacacatgattgaaactattaacaaaatc
aaccgtgtgtcacgtcagcttttacaggaaatgggtcgtgaaccaactcctgaagagtta
ggtgagcgtttggaaatggatgagatcaaagtccgtaaagtgctaaaaatcgccaaagag
cctatttccatggaaacaccgattggtgatgatgaagattcgcacttgggtgatttcatt
gaggacagcaacattacctcacccgttgatgctgcaacctcagaaggtctcaaagaagca
acacgtgaagttctagaaaacttgactgaacgtgaagccaaagtattgaaaatgcgtttt
ggtattgatatgccaacagaccataccttggaagaagtcggtaagcagtttgatgtgaca
cgtgaacgtattcgtcagattgaagccaaagccttgcgtaaactacgtcacccttctcgc
tctgagcatctacgctcattccttgaaaatgactaa
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