Acinetobacter larvae: BFG52_11340
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Entry
BFG52_11340 CDS
T04708
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
ala
Acinetobacter larvae
Pathway
ala03030
DNA replication
ala03430
Mismatch repair
ala03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ala00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BFG52_11340
03430 Mismatch repair
BFG52_11340
03440 Homologous recombination
BFG52_11340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ala03032
]
BFG52_11340
03400 DNA repair and recombination proteins [BR:
ala03400
]
BFG52_11340
Enzymes [BR:
ala01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BFG52_11340
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
BFG52_11340
DNA replication proteins [BR:
ala03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BFG52_11340
RNase H
BFG52_11340
DNA repair and recombination proteins [BR:
ala03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BFG52_11340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
DEDDh_C
DNA_pol_A_exo1
RVT_3
ATG29_N
Motif
Other DBs
NCBI-ProteinID:
AOA58888
UniProt:
A0A1B2M129
LinkDB
All DBs
Position
2531581..2533248
Genome browser
AA seq
555 aa
AA seq
DB search
MSEKIVLYVDGACRGNPGLGGWGALILTPEQQHELCGGALQTTNNRMELQAAIEGIQYCA
ADAQLVIWTDSNYVKRGITEWISSWKNKNWKNVKNPELWQQLDQVCQGRDIEWNWVKGHA
GHAGNETADRLANQGADLAAAAAQSASPNPILTAQNSTAMTAAIQQRYAFNPVQAVPTPA
SAAEATKTTDKKKIENDWLLDDPFGFDLLDNDAIAESTADTIAAETPATEIAAEKASTTL
ATATAHAVTATAEPTEQTDSDSDSDSDSAASFETESSSSHLAVPTAASQETTDIGQMTTD
NSDIHPAIHITAANISLDGPRQLILDTETTGFYYQDGDRIIEIGAIEMINRKLTGSSIHI
YIQPDKAVGDSVNVHGISDEFLVGKPRFAEIAQTAFAYLKGAEIIAHNASFDMNFLDAEF
QRCKLPALSSVCEVVDTLAMAKHKHPGQKNSLDALVRRYDIIQRDRTFHGALLDAEILAD
VYLAMTGGQVAFDIDALSQTEHDHEHGQQQTSYSQYQLAYIAPSAEELAAHQQWMEKYQE
KNDKACLFAQNSHNS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaaatcgtactttatgttgatggcgcttgccgaggtaatccagggcttggc
ggatggggtgcgctcattctaacaccagagcaacaacatgagctatgtggtggtgcccta
cagaccaccaataaccgtatggaactacaggctgcgatcgaaggtattcaatactgtgct
gccgatgcccagttggtgatttggaccgattctaactatgtaaaacgcggtattacagaa
tggattagcagttggaaaaataaaaactggaaaaatgtaaaaaacccagaactttggcaa
cagcttgaccaagtttgccaaggtcgtgatatcgaatggaattgggtcaagggacatgcc
ggtcatgctggcaacgaaacggctgaccgtttagccaatcaaggcgcagacttagccgct
gccgcagcccaatctgcaagcccaaacccaatcttaacagcgcaaaacagcacagccatg
accgcagcaatacaacagcgctatgctttcaacccagtacaggctgtaccaacgcccgct
tcagcagcagaagcaacaaaaacaacagacaaaaaaaaaattgaaaatgactggttatta
gatgatccttttggctttgatttactcgacaatgacgctatagctgaatcaacagcggat
acaattgccgcagaaacgccagctacagagatagcggcagaaaaagcaagcacgacactt
gccacagcgacagctcacgcagtaacagcaacagcagagcccacggaacagaccgactca
gactcagactcagactcagactcagcagcatcgtttgaaacagaatcttcttcaagtcat
ttagctgtgcctacagcagcaagtcaggagacaactgacatcggtcaaatgacgacggac
aacagtgacatccatccagccattcatatcacagcagccaacatcagtttggacggtcca
cgtcagctcattctcgataccgaaaccactggtttttattatcaagatggcgatcgtatt
attgagattggcgccattgaaatgattaaccgtaagttaacgggtagctctattcacatc
tatattcagcctgacaaagctgtcggtgattcagtcaatgtgcatggtattagcgatgaa
tttttggtgggtaaaccacgttttgcagaaatcgcccaaaccgcatttgcatacctcaag
ggcgccgagattattgcccacaatgccagcttcgatatgaacttcctagatgcagagttt
caacgttgtaaactccctgcattatcaagcgtatgcgaagttgttgacaccctcgcaatg
gcaaaacacaaacatcctgggcaaaaaaactctctagatgctttggtacgtcgttacgat
attattcagcgtgaccgtaccttccacggcgctttactggatgccgaaattctagcagat
gtctatctggctatgacgggtggtcaggtcgcttttgatattgatgccctaagccaaact
gagcatgaccatgaacatggtcagcagcagaccagttatagccaataccagttggcttat
attgcaccttctgcggaagaacttgctgcacatcaacaatggatggagaaataccaagaa
aaaaatgacaaagcttgtttatttgcacaaaatagccataacagctaa
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