Acinetobacter larvae: BFG52_15020
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Entry
BFG52_15020 CDS
T04708
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ala
Acinetobacter larvae
Pathway
ala03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ala00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BFG52_15020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ala03021
]
BFG52_15020
03400 DNA repair and recombination proteins [BR:
ala03400
]
BFG52_15020
Enzymes [BR:
ala01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BFG52_15020
Transcription machinery [BR:
ala03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BFG52_15020
DNA repair and recombination proteins [BR:
ala03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BFG52_15020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AOA59529
UniProt:
A0A1B2M2X3
LinkDB
All DBs
Position
complement(3390793..3394986)
Genome browser
AA seq
1397 aa
AA seq
DB search
MKDLLDIMRKKTDSEGYTPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG
LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIW
FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPLEKNQLLNDEEYFAALEEHGDE
FTAKMGAEAVQDLLKDIDLEAEISRLREEIPQTTSETKLKKASKRLKLMEAFKDSNNKPE
WMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNE
KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI
TVGPNLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLASV
IRQHPVMLNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE
AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAVNAKGEGMVFADTHEVNR
ALATGQVDLHARVKARVHQTVINEQGEREQQTIVVETTPGRCLLWEVVPEGMDFQQINIE
MTKKNISKLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMVIPPQKQAIID
KAEAEVREIEHQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSYTTVKNKQGEDEK
QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVITEPDCGTNEGLVMTPLIQGGDVIEAL
RDRVLGRVTAEDVRRAVDDEVVLPRGTLIDEKIAAELEDAGVDEVKVRSVVSCESTFGVC
AKCYGRDLARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNK
GTVRFHNVKTVQHAKGHLVSVSRSGEIGIADDLGRERERYKLPYGASILLKDGEAVEAGG
IVATWDPHTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPVSGKDLR
PAIVLDTQDGGEQFYFLPQNTIVTVRDGETIGVGDVIGRVPQETSRTRDITGGLPRVADL
FEARKPKEHAILAEVSGIVSFGKETKGKNRLVITPDDGSEVYEELIPKWRTINVFEGEHV
NRGEVVSDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKV
EITDGGDSSFIKGEQIDYSRVVQENQAVNAQNKFPAKFERQLMGITKASLSTDSFISAAS
FQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEFELAND
FSEVDQAFSQALNEEQF
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctcgatatcatgcgtaaaaagacggattcagagggttatacaccagtt
gaatttgaccgtattcgtattggtcttgcgtcaccagaaatgattaagtcatggtctcac
ggtgaagtaaaaaaaccggaaaccattaactatcgtacttttaaacctgaacgtgatggt
ttgttctgtgccaagatttttggtccagtaaaagattatgaatgcttgtgtggtaaatac
aagcgcatgaaatacaaaggcgtaatttgtgaaaaatgtggcgttgaagtcactaccgca
aaagtacgtcgtgagcgcatgggccatattgagttggcatctcctgttgcacacatttgg
ttcttaaaatcattgcctagccgtatcggtctattactcgatatgacgttgcgtgatatt
gaacgtgttctgtatttcgaatcttatgtggtgaccgatcctggtatgacaccacttgag
aaaaaccagttattgaatgatgaagaatacttcgctgcgcttgaagagcatggtgatgaa
ttcacagcgaaaatgggtgctgaagcggttcaagatttgttaaaagacattgatcttgaa
gctgaaatttctcgtttacgtgaagaaattccacaaacaacgtctgagacgaagctgaaa
aaagcgtctaaacgtttgaaattgatggaagcattcaaagactcaaataacaagccagaa
tggatggtgatgaatgtactaccagtacttccaccagacttacgtccattggtaccgcta
gaaggcggtcgttttgcgacttctgacttgaacgatttgtatcgtcgcgtgattaaccgt
aacaaccgtctcaaacgtctacttgatcttgctgcgccagatattattgtgcgtaacgaa
aaacggatgttgcaagaatcagtcgatgccttgttagataacggtcgtcgtggtcgtgcc
attaccggttcgaacaaacgtccattgaaatctttggcagacatgatcaaaggtaaacaa
ggtcgtttccgtcaaaacttgctcggtaaacgtgttgactactctggtcgttcggtcatt
accgttggtccaaacctacgtttacatcaatgtggtttaccgaaaaaaatggcgcttgaa
ctgttcaaaccatttatttttgccaaactacaagcctctggtcaagcaaccaccattaaa
gctgcgaagaaaatggttgagcgtgaaacaccagaagtatgggacgtgttagcctctgtg
attcgtcaacatcctgtgatgttaaaccgtgcaccgactttgcaccgtttgggtctacaa
gcatttgaaccgatcttaattgaaggtaaagcaattcgtctgcatcctttggtatgtgcc
gcatttaacgccgactttgacggtgaccaaatggcggtacacgtaccattgacgcttgaa
gctcagcttgaagcgcgtgcattgatgatgtcaaccaataacatcttgtcaccagccaat
ggtgagccaattatcgtaccttctcaggacgtggtcttgggcttgtattacatcacacgt
gatgcagtcaatgccaaaggtgaaggcatggtatttgccgatactcacgaagtaaaccgt
gccttggcaacaggtcaagttgatttacatgcgcgtgtaaaagcacgtgtacaccaaacg
gtgatcaatgagcaaggtgaacgtgagcaacaaaccattgtggtagaaaccacaccaggt
cgttgtttgttgtgggaagttgttcctgaagggatggatttccaacaaattaacattgag
atgaccaaaaagaacatctctaagctgatcaactcttgttatcgtaaattgggcttaaaa
gatacagttatctttgctgaccaattgatgtacctcggcttccgccaagcaacccgttct
ggtgtatcggttggtatggaagacatggttattccgccacagaaacaagcaattattgac
aaagctgaagctgaagtgcgtgaaattgaacatcagtttgaacaaggctttgtaaccgcg
ggtgaacgttataacaaagtggtcgatatttgggcacgtaccaacgaccaagttgccaaa
gcgatgatggacaacttgtcttataccactgtgaaaaacaaacagggtgaagacgagaaa
caaaaatcgttcaacagcatctacatgatgtctgactctggtgcccgtggtagtgcggcg
cagattcgtcagcttgcggggatgcgtggtttgatggcgaaaccagatggttcgatcatt
gaaaccccaattaaagccaacttccgtgaaggcttaaccgtactgcagtactttatttcg
acacacggtgcgcgtaaaggtttggccgataccgcattgaaaaccgcgaactctggttat
ttaacccgtcgtttggtggacgtggcacaagacttggtgattactgagccagattgtggc
accaatgaaggtctagtgatgaccccattgattcaaggtggtgatgtaatcgaagcgtta
cgtgaccgcgtattgggtcgtgtaactgccgaagatgtacgtcgtgctgttgatgatgaa
gtggtgttaccgcgtggtacgctcattgatgagaaaatcgcagcggaacttgaagatgcc
ggtgtcgatgaagtcaaagtacgttcagtggtgagctgtgaatccaccttcggtgtttgt
gctaaatgttatggtcgtgacttggcacgtggtcacttggtaaacccaggtgaatctgtc
ggggtaatggcggcacaatcaattggtgaaccgggtacccagttaaccatgcgtacattc
cacgtcggtggtgcggcaagccgaacttctgctgccaatagcgtacaagtgcgtaacaaa
ggtacagtacgtttccataacgttaaaactgtacaacatgccaaaggtcacttggtatct
gtttcccgttcaggtgaaatcggtattgcggatgatctaggtcgtgaacgcgaacgttat
aaactgccatacggtgcgtctatcttgttgaaagatggcgaagcagtagaagcaggcggt
atcgttgcgacatgggatccacatacccatccattggttacagaagttgcaggtaaagca
cgtttcagccaaattgctgatggtgtgactgcgacctctaaaacggatgatgcaacaggt
atgaccactgttgagatcctaccagtgactgcacgtccagtatctggtaaagatttacgt
cctgcgattgtattggatacccaagacggtggtgaacagttctacttcttgccacaaaat
accattgtgaccgtccgtgatggcgaaaccattggtgtgggtgacgttattggtcgtgta
ccacaagaaacttcacgtacccgtgatattaccggtggtttgccacgcgtagctgacttg
ttcgaagcacgtaaacccaaagagcatgcgatcttggcagaagtgtctggtatcgtgagc
tttggtaaagaaaccaaaggtaagaaccgtttagtgattacaccggatgatggttcagaa
gtttacgaagaactaattccaaaatggcgtaccattaacgtgttcgagggtgagcatgtt
aaccgtggtgaggttgtttctgacggcccacaaaacccacatgacatcttacgcttgaaa
ggtgaagtggcgttgaccaactacatcgtaaacgaagtacaagacgtctatcgcttacaa
ggtgtaaaaatcaacgataagcacatcgaagtcattgtgcgtcaaatgttacgtaaagtt
gaaatcaccgatggcggtgacagtagctttatcaaaggcgaacaaattgactatagccgc
gtggtgcaagagaaccaagctgttaatgcgcaaaacaagttccctgcgaagtttgaacgt
caattgatgggtattaccaaagcatcgttgtcaactgactcattcatctccgctgcatcg
ttccaggaaaccacacgtgtgttaactgaagcggctgtcactggtaaagaagatgatcta
cgtggtctaaaagagaacgttgttgtgggtcgtttgattcctgcaggtacaggtttggca
taccatcttgagcgtcgtcgccaagaagcggaagctgctgaatttgaattggcgaatgac
ttctctgaagttgaccaagctttctctcaagctttaaacgaagaacaattctaa
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