Apis laboriosa (Himalayan honeybee): 122712445
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Entry
122712445 CDS
T07817
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 homolog
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
alab
Apis laboriosa (Himalayan honeybee)
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alab04121
]
122712445
Ubiquitin system [BR:
alab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
122712445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
122712445
NCBI-ProteinID:
XP_043788068
LinkDB
All DBs
Position
Unknown
AA seq
1824 aa
AA seq
DB search
MNIYRACRFVRQLKLAGNLARSLAGSLARSLAVGGSGGGSGGGGGSGSGGGGGGNGSNNG
GNGGGGGSGGGARGAEPAAASAVSVAVDNVAGQPSGPQIIEWEETDRYSFDDSDRFEEDS
LCSWSSEPESLCNNWRGWRRPTAGFGTTKKPMEDGQTVPTLCELAARCVASHIPFELVEH
VYPPVPEQLQLRIAFWSFPDNEEDIRLYSCLANGSAEEFQRGEHFFRLRSVKDPLQIGFH
LSATVNSQGVMNGVRSQFNVAVTFDRRKITSCNCTCSSKAYWCAHVVAVCLHRIHMPTQV
CLRAPVSESLSRLHREQLQKFAQYLISELPQQILPTAQRLLDELLSVQPSTINSYCGAPD
PTAGASAHDQTSWYLDEKTLHDNIKKILIKFCVPAPIVFSDVNYLSTTAPPAAAEWSSLL
RPLRGREPEGMWNLLSIVREMFKRTDRNAIPLLEIITEECMACEQILVWWFNTKVALLNG
TGYGGKHNMNSNVHASQHACSSLCDEIVVLWRLAALNPGLSPAERDMLHSQFTAWHMKII
DKVTKSRGSSVTHNSHNRNNGGGHKDSLKNDLAVFTGFKSALEACYLDWEEYTLPGITYT
AGSNPMYHCPFTCFRHAGDTRTEVNQVNSSAAVLNCQPPVSHHHGRRPLSLGLVEFSYMD
RRRLNPRECSGLCSRSGGGDGNRSSVSSEGFCENETDMPDISEPQVVLVRRSCAQLNNCG
DTDSQEGGGSESSSNSNVSLKNAQDSDKHRSNASSETHSDSSDSSNNKATCDAKCSRTNL
DYREKSRTVMPKANSSKSEQESDQEKDPSRRPSKDESSSSSSDSPSGDEYHVYYYDPKAV
VNTNGASSKDSKNESQSTSTPNASTVLGNLMKTEDPWDILFARAEGLYAHGHTREACILG
VQLAEELLANPPNLMIDEPPAPVKGKKKKQQVNPASHQLTCLASATLAKCCFLCTVLAEN
PEYYNLAFRVGLFGLEMARPPANTKPLEVKLAHQESELVGLLKKIPLGLAELAMVRQRAE
QLRDGVLRSRGHALLPIMLASFIFDALNTSRLKHLSSDVDENLGFDAAVAALGLKANVSE
ADHPLLCEGTRRQRGDLAITLLVHYKDEPTKVARIMDKLLDRDVHQLIKSPILSSYYTSN
PPTKSEMTRYLHDEECSSPLAGTDAGNGDSVVGTSSRPHSSTSAELETGMNTLTVQPQIV
QQPVPTRTKETRYKSKRVYPSIPNQPSEASAHFMCELAKTVLIKAGGNSSTSLFTQASTS
QNHHGPHRALHMCAFQLGLYALGLHNCVTPNWLSRTYSSHVSWITGQAMEIGAPAISFLI
ESWEGHLTPPEAVGIADKSSRGSDPNMVRAAAELALSCLPHAHALNPNEVQRAILQCKEQ
SDLMLEKACITVENTAKGGGVYPEVLFQVAKYWYELYLRHTPGGEQQDDMPHDPLQLDLN
GVLLVEPGPPVDMSNGQMMPGPAQAVVVTSTQPPPQPYPTHPTITTLAPLGVGMPYAVGP
YSFVHPHHSIPTFGGPMPSHRVTLPPAPPHMQMYHAAFPPHPGHPQHPQHPQHPQHPQHP
QHPQHPHHPTQPTQPPSLPQYYTPQPPPPPGTHHLFTMQQPMPVNVQAGVTGPIPGQAQP
IISTVRTQPQIHRQTQAFSQQQLRALVAAYRVGMLALETLARRVHDDRPQAKYARNPPYG
EDVKWLLRVSKRLGTQYLHQLCICTVNSIVSPFVLHDVALEAALYLARNNRALVLQHLRS
ALLAPLVHKCQQMYIQCMHQKLYHLTSGEYEDFVNVVCAARAAFHITPEGHVQFKERLQS
IKRSQSCTKELWAQINAALQQNGK
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttatcgcgcgtgccgattcgtacgacaattaaaactggcgggcaatctggct
cggtctctggcgggcagtctggctcggtctttggcggtgggtggtagcggcggcggcagc
ggtggcggtggaggcagtggaagcggcggagggggtggtggcaatgggagcaacaacggt
ggaaatgggggtggcggtggatccggtggcggtgctcggggcgcagagcctgctgccgct
tccgccgtatccgtagccgtggataatgtcgctggtcaaccgagcggtccgcagataatc
gaatgggaggagaccgatcgttattccttcgacgactctgatcgcttcgaagaggattct
ttgtgcagctggagcagtgagccagagtcgttgtgcaataactggagaggatggcgacga
cccaccgccggttttggcactaccaagaagcctatggaagatggacaaacagtgccgacg
ttatgcgagctcgctgcacgatgtgtcgcgtcgcatatacctttcgagctggtagaacac
gtatatcctcctgttccggagcaattgcagctcaggatagcgttttggagttttccagac
aacgaagaggatattaggctgtactcatgcttggcgaatggtagtgcggaagagttccag
cgtggcgaacatttcttccgattgaggagcgtgaaagaccccctgcagatcggatttcat
ctgagtgcaacagtgaactcgcagggggtgatgaacggtgtcagatcacaattcaacgtc
gctgtcacttttgatcggaggaaaatcacatcttgtaactgcacttgctcctctaaggcc
tattggtgtgctcacgtggtcgccgtttgccttcataggatacatatgccgacacaggtg
tgcctgagagctccagttagcgaatccttgtcacgtttacaccgggaacaactgcaaaag
ttcgcgcaatatctcatcagcgagctgccgcagcagattctgcccactgcccagcgtctg
ttggacgagctgttgtcggttcagccaagtaccatcaacagttactgcggtgccccggat
cccacggcaggcgcctcggctcacgatcaaacctcctggtacctcgatgaaaagactctt
cacgataatatcaagaagattcttatcaaattttgtgtacccgctcctatagtcttcagt
gatgtaaattatttgagcactactgcgcctcctgcagctgccgaatggtcctcgttgctg
cgaccattgcgaggtcgtgaaccagaaggcatgtggaacttattgtcgatcgtgcgcgaa
atgtttaagagaaccgatcgtaacgctataccattgttggaaatcatcacagaggagtgc
atggcttgcgaacagatactcgtttggtggttcaacacgaaagtagctctattgaacggg
accggatacggcggtaaacacaacatgaatagcaacgtccatgcatcacagcacgcttgc
tcgtccctgtgcgacgagatcgtcgtactttggcgactggctgctttgaatcctggatta
tcgcctgctgaacgagatatgcttcacagccagttcactgcttggcacatgaagattatt
gataaggttacaaaaagtagaggcagttcggtaacgcacaattcacacaacagaaataac
ggtggcggacacaaagattcattaaaaaatgatttagccgtgttcaccggatttaaatca
gcgcttgaggcctgctacttggattgggaagagtacaccttacccggtatcacctacact
gccggaagcaatcctatgtatcattgtccgttcacgtgcttccgacatgcaggtgatact
aggactgaagtgaatcaggtgaattcgagtgctgccgtgttgaattgtcaaccaccggtt
tcgcatcatcacggtcgacgacctttgagtttaggcctggtagagtttagttatatggac
agaagacggttgaatccgcgcgaatgttcaggtctatgctcacgaagcggcggtggtgat
gggaaccgaagtagtgtcagttctgaaggtttctgtgagaatgaaaccgatatgcctgat
atttccgagcctcaagtagttctcgttagacgatcttgcgctcaattaaataattgcggg
gacacagattcgcaggagggtggtggtagcgaatcgtcctccaatagtaatgtcagtctg
aagaacgctcaagactcggacaagcaccgctcaaacgcctcgtccgagactcatagtgat
agtagtgatagtagtaataataaagctacctgcgacgcgaagtgtagcaggacgaatctc
gattaccgagagaaatcgcgaacagtgatgcctaaagcgaatagttcgaagagcgaacaa
gaatctgaccaggagaaggatccttccaggagaccctccaaggatgagagctcatcatcg
agtagcgacagtccgtctggtgacgaatatcacgtttattattatgatcctaaagctgtg
gtgaatacgaatggcgcatctagcaaagattccaagaatgaatcacaatccacatccact
ccgaacgcgagtactgtgttgggtaatctgatgaaaacggaagatccatgggacatcctg
tttgccagggcggaaggactctacgcccatggccacacgagggaagcttgtattttgggt
gttcaactcgccgaggaactgctggctaatcccccaaatctcatgatcgatgaaccacca
gcaccggtgaaggggaaaaagaagaagcaacaagttaatccggcgtcccatcagcttacg
tgtcttgcgtccgccacgttggctaaatgctgtttcctgtgcaccgttctcgcagaaaat
ccggaatactataacttggcgtttagagttggcttatttggattggaaatggctagaccg
ccagctaacacaaaaccattggaggtaaaattagctcatcaggagagtgaattagtagga
ttactgaagaaaattccacttggtcttgcggaattggccatggttcgacaaagagcggaa
caactgagggatggagtactgagatccagaggacatgcgctgcttccaattatgttggct
agttttatattcgacgcccttaatacgtcaagactaaaacacctgtcctcagacgttgac
gagaaccttgggtttgatgcggccgtggctgctctgggcttgaaggcgaacgtgagcgaa
gctgatcatcctcttctttgtgagggaacaagacgccaaagaggagatttggctattaca
ttgctcgtgcattataaagatgaacctacgaaagtagcaagaattatggataagttattg
gatcgagatgttcatcagttaattaaatcaccaattctcagcagttattacacctctaat
cctcctactaagagcgagatgacaagatatcttcatgatgaagaatgctcttctcctctt
gctgggacagatgctggaaatggcgatagtgtggttggtactagcagtagaccacacagt
agcactagtgcagaattagaaactggtatgaatacactaacagttcaaccccaaatagtt
caacaacctgtgcctactagaactaaagaaacaagatacaaaagcaagagagtatatcca
tcaattcccaatcaaccatcagaagcaagtgcacactttatgtgtgaactagcaaagact
gttctcataaaagctggaggcaatagttccacttctctatttacacaagcatctacaagt
caaaatcaccatggacctcatagagctctccatatgtgcgcctttcaacttggtctatat
gctcttgggcttcataattgtgtcactcctaactggcttagtcgaacctattcgagtcat
gtatcctggatcactggacaagcaatggaaattggagcaccagcgatttcgtttcttatt
gaaagttgggagggacatttgacgccacctgaggcagtcggtatagcagacaaatcatct
agaggaagcgatcctaacatggttcgagcagccgcagaacttgcattgtcttgtttgcct
catgctcacgcgctcaatcctaatgaagtccagagagctattttacaatgtaaagaacaa
agtgatctcatgttggagaaagcttgtatcacagtagaaaatacagctaaaggaggaggg
gtttatccagaagtactatttcaagtggctaaatattggtatgagctgtatctcagacat
actcctggtggagaacaacaagatgatatgccacatgatcctttgcaattggatctcaat
ggagtgcttttggtagagcctggtcctccagtagatatgtccaatggacaaatgatgcct
ggaccagctcaagcagttgtcgtgactagtacacagccacctcctcaaccatatccgacg
catccaactataaccacattggctcctttaggagttggtatgccatatgcagttggtcct
tatagtttcgtgcatccgcatcactcaattccaacttttggtgggccgatgccgtcgcat
agggtaactctaccaccagcaccaccacacatgcaaatgtatcatgcggcattcccgcct
catcctggtcatccgcaacatccacaacatccgcaacatccacagcatccacaacatcca
cagcatccgcaacatcctcatcatccaacacaacccacgcaaccaccatcgctgccgcaa
tattatacaccgcaacctccaccgcctccaggaactcatcatttgttcaccatgcaacag
cctatgccagttaatgtacaagcaggagtgacaggacctattcctggtcaagcacagcct
ataatatctacagtaagaactcaaccacagattcatagacaaactcaggccttcagtcaa
cagcaacttcgagctttggttgctgcgtatcgtgtgggaatgttagcattggaaactttg
gctcgtcgtgtacatgatgatagaccgcaagcgaaatacgcgcgaaatccaccctatgga
gaagacgtgaaatggttattgagagtatcaaaacgtctcggtactcaatatcttcatcaa
ctttgtatttgtacagtgaatagcatcgttagtcctttcgtccttcatgatgtcgcattg
gaggcggcactctatctggctagaaacaaccgggctcttgtacttcaacatttgagatct
gctttgttggcacctcttgttcacaagtgtcaacaaatgtatattcaatgtatgcatcaa
aaattatatcatttaacatcaggcgagtatgaagactttgtcaacgtagtgtgtgcggcg
agagcagcgtttcacattaccccagaaggtcatgttcaattcaaagagcggcttcaatcc
attaaaagatctcaatcctgtaccaaagaactgtgggcacaaattaacgcagcactacag
cagaacggcaaatga
DBGET
integrated database retrieval system
