Apis laboriosa (Himalayan honeybee): 122712574
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Entry
122712574 CDS
T07817
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
alab
Apis laboriosa (Himalayan honeybee)
Pathway
alab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122712574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alab03400
]
122712574
DNA repair and recombination proteins [BR:
alab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
122712574
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_22
Motif
Other DBs
NCBI-GeneID:
122712574
NCBI-ProteinID:
XP_043788275
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MSKVNTLYNYFTSPKTPKTPKQSNNKQISDEKPTTPKRARGQLNKVKIPSKGKENKNLED
RKRIYKDDEEEKEENEPIQTKKRRLIIPDEESGEDSGDEFKPDLDDESEESDSGSEGVSE
SEPPTASEEETPEKKRKLINSVGRKPQKGAKKNFKEDKKESKLQQQSQSQGSNNVIDSWP
HLKYDFLQPNKIRDINKKSPKDSDYDPKTLYVPLDFLNQQTPAMRQWWELKSKHFDCVLF
FKLGKFYELYHMDAVIGVNELHLTYMRGEFAHSGFPEIGYGRFSASLIERGYKVARVEQT
ENPDMMAQRVSNMIRPTKFDKVVKREICQITSKGTRVYTPQDIEPSTPNSNYLLSVIEKC
PSGSNISHYGVCFLDTTIGDFYLGQFEDDRCNSRLLTLLAHYPPVHVVYERGNLSQRTLQ
IFNNNLAACIKESLLRESQFWSSSTTLKNLHEGDYFKKSDSEFQWPTGLQSFLNKNDSLG
LTPAEDKELAVHALGGCAYLLKEYLLEQQLLAQGRFKTYVPPDFSNKTFETSKFANNMVL
DAITINNLRIFGEGSLIKTLDRCCTAFGKRLLREWICRPSCRKNVIIERQEAIQELIDHS
EIVQTTRSILAGLPDLERLLSKIHAQGNPAKQNNHPDGRAIMFEGQTYSKKRIIDFITTL
NGFEDVLKVIALFEDFCSTLISKCTKVEPDGEFPSLRESLDYFKTAFDHEEAKKVGCIVP
KKGVDCEYDSVLMELEEIKKDSEQYLEKQKKHFGVKITFHGSDKKRYQIEIPDSQTKKVG
AGFELQSQRKGYKRYYTAESKELLNRQINAEEHRDKVLKDLNRRIFAQFSEKYDMWSMAV
YKLSVLDVLISLTEYALSGDMCVPEINDGTNEKIFIDIRDGRHPCIISDTFIPNDTLLAT
ENFASFMILTGPNMGGKSTLMRQVALLTIMAQIGSYVPASSCRLTLVDRIFTRLGANDDI
LAGQSTFLVELSETSAILQHATPYSLVLLDELGRGTSTYDGTAIAAAVVNALTKLNCRTL
FSTHYHSLVEDYKNNKKITLAHMACMVENEEQDKVSQETVTFLYKLGEGACPKSYGFNAA
RLGGVPAVITSRAHEISKKLEKETNQKHFFTTLCKANGSTIRDLIAAM
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagtgaatacattatataattattttacatcgcctaaaactcctaaaacacct
aaacaatcaaataataaacagatatctgatgaaaaacctacaacaccgaaaagagcaagg
ggacaattgaacaaagttaaaattccaagtaaagggaaagaaaataagaatcttgaagat
agaaaaagaatatacaaagatgatgaagaagaaaaggaagaaaatgaaccaattcaaaca
aaaaaacgaagactaattattcctgatgaagaatctggagaagattctggagatgaattt
aagcctgacctagatgatgaatcagaagaatcagattcaggatctgaaggagttagtgaa
agtgaaccaccaaccgcaagtgaagaagaaactccagagaaaaaacggaaacttattaat
tctgttggaagaaaaccacaaaaaggtgcaaagaaaaatttcaaagaagataaaaaagaa
tcaaaacttcaacaacaaagtcaatcccaaggttcaaataatgttatagattcttggcca
catttaaagtatgattttcttcaaccaaataaaatacgagatattaataaaaaatcgcca
aaagattcagattatgatcctaaaactctatatgttcctttggattttttaaatcaacaa
actccagctatgagacagtggtgggaattgaaaagtaaacattttgattgtgttcttttc
tttaagctaggaaaattttatgaattatatcatatggatgctgtaataggcgttaatgaa
cttcatcttacctatatgagaggagaatttgcacattcgggatttcctgaaattggatat
ggccgtttctcagcgagtctcatagaaagaggatacaaagtggcaagagtagaacaaacg
gaaaatccagatatgatggcacaacgcgttagcaatatgattagaccaacaaaatttgat
aaagtagttaaaagagaaatttgccaaataacttctaaaggtacaagagtgtacactcca
caagatatagaaccatctacaccgaattctaattatttattatcagtgattgaaaaatgc
ccatctggttctaacatatctcattatggagtttgtttcttagacactacaataggagat
ttttatcttggtcaatttgaagatgatcgatgtaattctagattattaactttactcgct
cattatcctccagttcatgttgtttatgaacgtggtaatttgtctcaaagaacgttacaa
atttttaacaataatttagcagcatgtattaaagaatcacttttacgcgaatctcaattt
tggtcatcttcgactacattaaaaaatcttcatgaaggagattattttaaaaaatcagat
tctgagtttcaatggcctacaggcttacaatcatttcttaataaaaatgatagtttaggt
ttaacccctgctgaagataaagaattagcagtacatgctttaggtggatgtgcatattta
cttaaagaatatctgcttgaacaacaattattggcacaaggacgttttaaaacatatgtt
cctccagatttttcaaataaaacatttgaaacttccaaatttgcaaataatatggtttta
gatgctatcacgattaataatttgagaattttcggggaaggttctcttataaaaacgcta
gatcgttgttgtaccgcatttggaaaaagattgttacgagaatggatttgtagaccatct
tgccgaaaaaatgttataattgaacgtcaagaagctatacaagaattaatagatcattca
gaaatagtacaaactactcgtagtatattagcagggcttcctgatcttgaaagattattg
agcaagattcatgctcaaggaaatccggcaaaacaaaataatcatcctgatggcagagct
atcatgtttgaggggcaaacgtattcaaagaaaagaattatagattttattactactttg
aatggttttgaagatgtcttaaaagtaattgctttatttgaagatttctgtagcacttta
ataagcaaatgtactaaagtggaaccagatggtgaatttccttcattaagagaatcttta
gattattttaagactgcattcgaccatgaagaagccaaaaaagtaggttgtattgttcca
aagaaaggagtcgattgtgaatatgattccgttttaatggaacttgaggaaataaaaaaa
gattcagaacaatatcttgaaaagcaaaaaaaacactttggggtaaaaatcacgtttcat
ggttcggataaaaaacgttatcagatcgagattccagattctcaaacgaaaaaagttggt
gctggatttgaacttcaatcacaaagaaaaggatacaaacgttattatactgcagagtca
aaggaacttttaaatcgacaaataaatgccgaagagcatagagataaagtattgaaggat
ttaaatagaagaatatttgcacaatttagcgaaaaatatgatatgtggagtatggcagtt
tataaattgtctgttttagatgttcttatttctttaacagaatacgctctcagtggtgat
atgtgtgtaccggaaattaatgatggtacaaatgaaaagatatttattgatattcgagac
ggacgacatccatgtattatttcagatacatttataccaaatgatactttattagcaact
gaaaatttcgcttctttcatgattctcactggaccaaatatgggcggtaaatcaacattg
atgcgtcaggttgcccttctcactataatggcacaaattggaagttatgttcctgcaagt
tcctgtcgtttaacattagtagatcgtattttcacgagattgggagcaaatgacgatatt
ttggctggtcagagtacattcttagtagaattaagcgaaacttctgcaatattacagcat
gctacaccatattctctcgtattactcgatgaattaggacgtggtacatcgacgtatgat
ggtacggcaattgctgctgcagttgtaaatgcacttacaaaattaaactgtcgtacttta
ttttcgacgcattatcattctttggtagaagattataaaaataataagaaaattacatta
gctcatatggcatgcatggtagaaaatgaggaacaagataaagtatcccaagaaacagta
acatttttatacaaactcggcgaaggagcttgtccgaaatcatatggtttcaacgctgcc
cgattaggtggtgttccagctgtaattacaagtagagcacatgagatttcaaagaaactc
gaaaaagaaacaaatcaaaaacatttctttactactttgtgtaaagcgaatggttcaact
ataagggatctaattgctgcaatgtga
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