Apis laboriosa (Himalayan honeybee): 122712597
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Entry
122712597 CDS
T07817
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
alab
Apis laboriosa (Himalayan honeybee)
Pathway
alab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122712597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alab03019
]
122712597
03012 Translation factors [BR:
alab03012
]
122712597
Enzymes [BR:
alab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122712597
Messenger RNA biogenesis [BR:
alab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122712597
Translation factors [BR:
alab03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122712597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_N
HA2_C
AAA_22
nSTAND3
ResIII
ATPase
PhoH
AAA_19
AAA_14
NACHT
NPHP3_N
ABC_tran
NB-ARC
AAA_16
TsaE
T2SSE
RsgA_GTPase
Sigma54_activat
ATPase_2
Motif
Other DBs
NCBI-GeneID:
122712597
NCBI-ProteinID:
XP_043788286
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MHPRRKHGGRGESSQPGGSHFERGNRTRGRGQGHPPWLSGKEIGLYYRDKAKAKAKQKES
RVKLPLHVQEKIKNVLENSKDYYDKLYNNAYTEVTYGTLENKYIHIHDSQFKRKFMNMVS
GNIQENLAKALMVKSKLERDIELDTKLIAEYKAKQSLQKYMDMIKVRSKLPSYKKKSEIL
ELIKENQVIVISGETGCGKTTQVAQFILDEQIEEGNGSITRIICTQPRRISAISVAERVA
TERAENLGKSVGFQIRLEKILPRERGSILFCTTGMLLQFLQGDPALKEFSHIILDEIHER
STESDFVLALLKLIIPKRPDLKILLMSATLNSERFSKYYDDCPMIHIPGFTYPVEEFYLE
DILMLTEFKFPAAAALPQDYRKHTKKYKQVQQKRDEFHDVLDPYIRQLIAEKKYPREVID
QLRNPYSEMMSLDLIEQLIRHICRTKAPGAILVFLPGMMDITKLNRMMLDTGCYSQSHYV
IYPLHSRMPTIDQKLIFKEPPKGVRKIIIATSIAETSITIEDVVYVIDCGKMKFGKFDIQ
KNIQTLEPEWVSLANAKQRRGRAGRVKPGICYHLYSKAREMTLDQYPLPEMLRARLEEVI
LQIKILQLGKARTFLASVMDPPSSKAIDLSLDLLQTLNALDDEEHLTPLGYHLAQLPLDP
RTGKMIIWAALFSCVEPVFAIAASLSFKDAFYCPLGKEDQAHQKKLELNMGQFSDHIALS
EALTGFELAYKRGYASSFCREYFLSFNTLKLLSEMKTQFAQHLFQMKFMETENPSDSNAN
KNSKNTMLVKAIVCAGLYPNVAIIKRVTKNGTLAWTPEDGSVAVHPSSVNDKVKKFPSPF
ITYFTKQLSTAIYLHDTTCVTAPILLFAAPNMTIKKEKGNYFISLASSQNFACDLQTAQL
IQKLQEQFNNMLEYKITHPGIVRWNSFEGDLLNAIIDLVCQKDEEMGFCNSNIQNCEDNI
YDDV
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcatccaagacgtaaacatggaggtagaggcgaaagttctcaacctggtggatcacat
tttgaacgtggtaatcgaacaagaggtagaggacaaggacatccaccttggttatctgga
aaagagataggactttattatagagataaggctaaagcaaaagctaaacaaaaggaatct
cgagttaaattacctttacatgttcaagaaaaaataaaaaatgtactagaaaattctaaa
gattattatgataaattatataacaatgcatatactgaagttacatatggcacattggaa
aataaatatatacatattcatgactctcagtttaaaagaaagttcatgaacatggtatct
ggtaacatacaagaaaatcttgccaaagctttaatggttaaatcaaaattagaaagagac
attgaattagataccaagttaatagctgaatataaggcaaaacaatctttacagaaatat
atggatatgataaaagtcagatcaaagttaccatcatataaaaaaaaatcagagatatta
gaattaattaaagaaaatcaagttattgtaataagtggagaaactggttgtggaaagaca
acacaggttgctcagtttatattggatgaacaaatagaagaaggtaatggtagtattaca
aggattatttgtactcaacctagaaggatatcagctatatctgttgctgaaagagtagca
actgaaagagcagaaaatcttggtaaatctgttggttttcaaattcgacttgagaaaata
ttgccaagagagagaggtagtatactattttgtactactggaatgctattgcaattttta
caaggtgatcctgctttaaaagaattttctcatattatattagatgaaattcatgaacga
tctacagaaagtgattttgttcttgctttgttgaaattaattattcctaaaagacctgat
ttaaaaatcctcttaatgagtgcaacacttaattctgaaagattttcaaaatattacgat
gattgtccgatgattcatattccaggttttacttatccagtggaagaattttatttagaa
gatattttaatgcttacagaatttaaatttcctgcagcagctgcattgcctcaagattat
agaaagcatacaaaaaaatataaacaagtacaacaaaaaagagatgaatttcatgatgtg
ctagatccttacatacgacagcttatagctgagaaaaagtatccaagagaagtgattgat
caattacggaatccgtacagtgaaatgatgtctcttgatcttatagaacaattaattagg
catatttgtagaacaaaagctcctggagctattttagttttccttcctggtatgatggat
ataacaaagttaaatagaatgatgttagatactggatgctattcacaaagtcattatgtt
atttatcctcttcactctcgtatgccaactattgatcaaaaactcatatttaaggaacca
cctaaaggagttcgaaaaattataattgctacttctatagctgaaacttctataactatt
gaagatgtagtatatgttattgattgtggaaaaatgaaatttggtaaatttgatattcaa
aaaaatatccaaactttggaacctgaatgggtatcactagctaatgctaaacagagaaga
ggtagagcaggcagagtaaaacctggtatttgttatcatttgtattctaaagctagagag
atgacactagatcaatatccattgcctgaaatgttaagggcgcgtttagaggaagtcatt
ttgcaaataaaaattttacaattaggaaaagctagaacttttttggctagtgttatggat
cctccaagttcaaaagctatagatttgtctttggatctacttcaaactttaaatgcatta
gatgatgaggaacatttgactcctttaggatatcatttagctcaattaccattagatcca
cgaacaggaaaaatgattatatgggcagcattattttcatgtgtagagccagtttttgca
attgcagccagtcttagttttaaagatgcattttattgtcctcttggaaaagaagatcaa
gcacatcaaaagaaacttgaattaaatatgggacaattcagtgatcatattgcattatct
gaggcattaacaggatttgagcttgcatacaaaagaggttatgcaagctctttttgtaga
gaatattttctttcttttaatacactcaaacttctttctgaaatgaaaactcagtttgcc
caacatttgtttcaaatgaaatttatggaaacagaaaatccaagcgatagtaatgctaat
aagaattctaaaaatacaatgttagtaaaagcaatagtatgtgctggattgtatcccaat
gttgctattattaaaagagttacaaaaaatggaacacttgcatggactccagaagatgga
agtgttgctgtacatccatcaagtgtaaacgataaagttaagaagtttcctagtccattt
attacatattttacaaagcaattatcaacagcaatatatttacatgatactacatgcgtt
actgcaccaattttattatttgctgctccaaatatgactataaaaaaagaaaaaggaaat
tattttattagtttagcaagtagtcaaaactttgcatgcgacttgcaaactgcacaactt
attcagaaattacaagaacaatttaataatatgttagaatataaaataacacatccagga
atagtacgttggaatagctttgaaggtgatttattaaatgctattatagatctggtttgt
caaaaagatgaggaaatgggattttgcaattctaatattcaaaactgtgaagataatata
tatgatgacgtttga
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