Apis laboriosa (Himalayan honeybee): 122712650
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Entry
122712650 CDS
T07817
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
alab
Apis laboriosa (Himalayan honeybee)
Pathway
alab03040
Spliceosome
alab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122712650
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122712650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alab03041
]
122712650
04121 Ubiquitin system [BR:
alab04121
]
122712650
03400 DNA repair and recombination proteins [BR:
alab03400
]
122712650
Enzymes [BR:
alab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122712650
Spliceosome [BR:
alab03041
]
Complex B
Other components
Prp19 complex
122712650
Complex C
Prp19-CDC5 complex
122712650
Ubiquitin system [BR:
alab04121
]
Ubiquitin ligases (E3)
U-box type E3
122712650
DNA repair and recombination proteins [BR:
alab03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
122712650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Prp19
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF4
eIF2A
U-box
B-prop_COPA_B_2nd
PAS_11
WD40_like
PT-TG
zf-Nse
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
122712650
NCBI-ProteinID:
XP_043788391
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MALSCAISNEVPEHPVVSPVSGSIFEKRLIEKYLAENGVDPITGKELTADQLIDIKTTAI
VKPKPPSATSIPAILKILQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGIVQATTIPQPALAVEAGGTAAQPMEQAGITEDVIQKLQERA
TVLTQERKRRGRSVPEDLLPQDSIRAFQTLASHPGLHSASVPGILALDIHSADTSKILTG
GADKNATVFNKDTEQVVAILKGHTKKVTRVIYHPEEDIVMTASPDTTIRIWNVGTSQTTL
LLKAHDAPVTGLSLHPTGDYLLSSSLDQHWAFSDIRTGRLLTKVAGQVSQPLTTAQFHPD
GLIFGTGTQDSQVKIWDLKEQSNVANFPGHSGPITAISFSENGYYLATAAEDFCVKLWDL
RKLKNFKTLQLEESYEVKDICFDQSGTYLAVAGTDVRVYLCKQWQELKVLNDHTAAATGV
RFGKHAQYIASTSMDRTLKLYGLP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcgctttcttgtgcaatttctaatgaagtcccggagcatccggttgtatctccagta
tctggttctatatttgaaaagagattaattgaaaaatatttagccgaaaatggagtagat
cctataactggaaaggaattaactgcagaccaacttattgatattaaaaccactgcaata
gtcaaacctaaaccaccaagtgctacttcaattccagctatattaaaaattttacaagat
gaatgggatgctgttatgttacattcatttacacttagacaacaacttcaaacagctaga
caggaattatctcatgcattatatcaacatgatgcagcatgtcgtgtaattgctagatta
acaaaagaagtaactgctgctagagaagctttagctactttaaaacctcaagcaggaatt
gttcaggctactaccattccacaacctgcacttgcagtggaagctggtggtacagctgct
cagcctatggagcaagctggaattactgaggatgtaatacaaaaacttcaggaaagagcc
acagtactcacacaggaaagaaaacgtcgtggacgttcagttcctgaagatttacttcca
caagatagtattcgtgcatttcaaacacttgcatcacatcctggtctccattcagctagt
gttcctggtatacttgcacttgatatccacagtgcagatactagtaaaattttaacaggt
ggtgcagataaaaatgccacagtatttaataaagatacagaacaagttgttgcaatatta
aaaggacatactaaaaaggttactagagtaatttatcatccagaagaagatatagtaatg
actgcatcacctgatactacaatacgtatatggaatgtaggaactagtcaaacaacattg
ctattgaaagctcatgatgctcctgtgactggactatctttacatccaacaggggattat
ttattaagttcatctttagatcaacattgggcattttcagatatacgtactggtagatta
ttaactaaggttgctggacaagtcagtcaacctttaaccacagcgcaatttcatcctgat
ggattgatctttggcactggtactcaagactctcaagtgaagatttgggacttaaaggaa
caatcaaatgtagctaatttcccaggtcattcaggtcctatcacagcaattagtttttct
gaaaatggttattatttagctactgctgcagaagatttttgtgtgaaactttgggatttg
cgtaaattgaaaaatttcaaaactcttcaattagaggaatcatatgaagttaaagatatt
tgctttgatcaaagtggaacatatctggcagtagctggaacagatgtaagagtgtatttg
tgtaagcagtggcaagaactgaaagtgcttaatgatcatacagcagccgcaactggtgtt
cgtttcggaaaacatgcacaatatatagcatcgactagtatggatagaactttaaaactt
tatggattaccttaa
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