Apis laboriosa (Himalayan honeybee): 122715253
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Entry
122715253 CDS
T07817
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
alab
Apis laboriosa (Himalayan honeybee)
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alab03036
]
122715253
Chromosome and associated proteins [BR:
alab03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122715253
microRNA pathway
RISC loading complex
122715253
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Dicer_platform
Dicer_dimer
Ribonucleas_3_3
PAZ
Helicase_C
Dicer_PBD
ResIII
DEAD
SBDS_N
Motif
Other DBs
NCBI-GeneID:
122715253
NCBI-ProteinID:
XP_043793231
LinkDB
All DBs
Position
Unknown
AA seq
1954 aa
AA seq
DB search
MAFPLNDQIYTKSFTPREYQVELFYAAKDKDIIVCLGKNYEQTFLVIKLIQEFATNNRRL
LSEGGKRSLYILTDEEKCIIKASYIQQLTDLKVLLCDTCPTAEFIEKFEISHVLLTTSKT
CAQLLADKKILPHQINLVIVDECHKSINNSQLKFILQTILSCNNVPRIIGLAVPLFNLTQ
EPGRLGLEIEKVENTFQCEVETASDILSILRYSPKPKEYVVEYAKSEKGELHITIENHIL
HAIEFLRDHRYDPTEIYNEEFYEDIQKIPDPTEKPFEMMQDLLHILETLGPWCADRAAFA
LLILTEKLKIKTPYERHYLLLNMIASVFTKIRALCDNAFEVLSEKEKIYKYTTTKVHRLL
QILKTYTPYYTKHINNTDNKINNENISRKFSTNNRDSIKDKFMQSKKLDCNWKSSEENCK
KPPVAQRHMRGITDPDLLCGVIFVDKAFVAKVLFYLLNEISMHDEELHFLSPLYTIEKNI
DDISYSKDLEIEHRKQEEVLKRFRIHECNILISTSILEEGIDIPKCNFVMRYDFPKTYQS
YVQCKSRARAPDALYVLLVSQEMSKEYVWQLAQYHYIEKTLLVKCSNNEPSEEEENEADM
YAAMIPHYKPLDGGDAPKVTFNSAISLVNRYCAKLPSDTFTRLTPEWSIQEMNIDNILMY
ICSLRLPINSPVKYIVSSYPMPNKAMARRMAALQLCIDLHRKNEIDDNLLPIGKENFKAK
PEDAEVPALPDESKVDFSEARPGTTKRRQYYYKKTAEALTDCRPIIGVPSYLYHINLVLS
CPLPEEQNTRGRRIYPPEESAIGFGIITLKEIPKLCPFPIYTRSGEVHVKLKLTKQTIIL
NEMQVEKIATFLNYTFTNVLRLQQYLMLFDPNASENSYMIVPVKLDEQSDIAVDWNFLEC
IYKNRNTGPTKIPEEARKNFKFDASKYHDAVIMPWYRSQDQPQYFYVAEICTNLNPKSSF
PGNDYGTFEEYYLKKYDIQIQNLDQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETK
RAKRENLEQKQILVAELCAIHPFPASLWRQAVCLPCILYRINALLLANQIRCQVAQMINL
GQENLNSDFEWPALDFGWSLAEVLKKSKESEKAKLIRNELNSTNAIDTKCQNISKDITEN
LYKLDKEDLNESNYEFQLTNDKITETEQQISNDENELEIGTWSSDMAMNSLDFGANNLKS
FPLNVTVLPNEFNWNDIRYGSPACESDFDGYESDDIYSDGFADTSDESEDENRGLRISYM
GENVAEAVEDEKQISKQEVNKKILDLLETEKNSDEILWSYAKESEVLITKHKLAHYEFAK
IKECEIKQNGSFIPYNNKIVIKRKTSFSLHSEENLPNYKYKTYVETVVDKFTQEILNNNE
IIQPIKKNSNTPKFTYHFDSNLFSFDFQPKLENHPGPSPSLILQALTMSNANDGINLERL
ETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNLYRLGRQKMLGESMIATKFE
PHDNWLPPCYYVPKELEQALIESGVPSTLWNQADIPALQAVNPFEITQLVRETEQKLGVM
KNELDRNETTLPNNLDNMRCFIPYNLITQHSIPDKSIADCVEALIGAYLIACGPRGALLF
MAWLGIHVLPTEEINIIQETEPKDRIPGSTPFVKGKNEKGQTIWTQIRYGKLEEPQNPLL
RYIVDPEEELKLMLDGYEELEKNIGYKFHDISYLLQAFTHASYQPNRLTDCYQRLEFLGD
AVLDYLITRHLYEDARQHSPGALTDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSIVI
NRFVRIQEENGHSISEEYYLIGEEECEEAEDVEVPKALGDVFESLAGAIYLDSGMSLDAV
WSVYYAIMKNEIEQFSTNVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVDVFGKGS
FKGIGRNYRIAKCTAAKCALKKLKRMQNYSREKL
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atggcatttccactaaacgatcaaatttatacaaaatcttttacacctagagaatatcaa
gtagaattattttatgctgctaaagataaagatataatcgtttgtttaggaaaaaattat
gaacaaacatttcttgttataaaattaattcaagaatttgcaacaaataatagaagatta
ttaagtgaaggaggaaaacgatcactatacatactgacagatgaagaaaaatgtatcata
aaagcaagttacatacaacaattaacagatttaaaagtattgttatgtgatacttgtcca
accgcagaatttatagaaaagtttgaaatttctcatgtattacttacaacttcaaagaca
tgtgcacaattattagcagataaaaaaattttacctcatcaaataaatctagtcatagtt
gatgagtgccataaatctataaacaatagccaactaaaatttattttgcaaactatttta
tcatgtaataatgttcccagaatcattggattagctgtaccattgtttaatttaacacaa
gaacctggaagattaggattagaaatagaaaaagtagaaaatacatttcaatgtgaagtt
gaaacagctagtgatatattatctatattacggtatagtcctaaacctaaagaatatgta
gtagaatatgctaaaagtgagaaaggagaattacatattactattgaaaatcatatattg
catgctattgaatttctacgtgatcatcgttatgatccaactgaaatttataatgaagaa
ttttatgaagatattcaaaaaataccagatcctacagagaagccatttgaaatgatgcaa
gatcttttacatatattagaaactcttggaccatggtgtgcagatcgtgctgcatttgct
cttttaattttaacggaaaaattaaaaataaaaacaccttatgaaagacattacttatta
ttaaatatgattgcatctgtttttacaaagatacgagctttatgtgataatgcatttgaa
gttttatctgaaaaagaaaaaatatataaatatactactacaaaagttcatagattatta
caaattttgaaaacatatacaccatattatacaaaacatattaataatactgataataaa
ataaataatgaaaatatttctcgaaaattttcaacaaataatagggattctattaaagat
aaatttatgcaatctaaaaaattagattgtaattggaaaagtagtgaggagaattgcaaa
aaaccacctgtagcacaacgacatatgcgtggcattacagatcctgatttactttgtgga
gtaatttttgtagataaagcatttgtagcaaaagtcttattttatttattaaatgaaata
tcaatgcatgatgaagagttacattttttatcacctctttatacaattgaaaaaaatatt
gatgatattagttattcaaaagatttagaaatagaacatagaaaacaagaagaagttttg
aaaagatttagaatacatgaatgtaatatactaatttcaacctcaattttagaagaaggt
atagatattccaaaatgtaactttgtaatgagatatgattttccaaaaacttatcaatcc
tatgtacaatgtaaaagtcgtgcaagagctccagatgccctgtatgtattattggtatca
caagaaatgtcaaaggagtacgtatggcaattagctcaataccattacatagaaaagact
ttgttagtaaaatgttctaataacgaaccatctgaagaagaagaaaatgaagcagatatg
tatgctgctatgataccacattataaaccacttgatggaggtgatgcacctaaagttact
tttaattctgctatatcattagtaaacagatattgtgcaaaattacctagtgatactttt
acaagattaactccagaatggtccattcaagaaatgaatattgataatatacttatgtat
atatgttctttacgacttcctataaattctccagtaaaatatattgtatcatcatatcct
atgcctaataaagctatggcaagacgaatggctgctttacaattatgtattgatttacat
agaaaaaatgaaatagatgataatttattacctattgggaaagaaaattttaaagctaaa
ccagaggatgcagaagtgcctgctttaccagatgaaagtaaagtagatttttctgaagct
cgaccaggaacaacaaaacgacgacaatattattataaaaagacagctgaggcattaaca
gattgtagaccaataattggagttccttcttatttatatcatattaacttagtgttaagt
tgtcccttacctgaagaacaaaatactagaggaagacgtatatatccacctgaagaatca
gctattggttttggtataataacattgaaagaaattcctaagttatgtccatttcctata
tatactagatctggagaagttcatgtaaaattgaaacttactaaacagactataatttta
aatgaaatgcaagtagaaaaaattgctacttttcttaattatacttttacaaatgtatta
agattacaacaatatttgatgctctttgatcctaatgcttcagaaaattcatatatgatt
gttcctgtaaaattagatgaacaatctgacattgctgtagattggaactttttagaatgt
atatataaaaatcgaaatacaggaccaactaaaattcctgaagaagccagaaaaaatttt
aaatttgatgcatcaaaatatcatgatgcagtaattatgccttggtatagaagtcaggat
caacctcagtatttttatgttgctgaaatttgtacaaatttgaatcctaaatcttctttt
cctggtaatgattatggcacttttgaagaatattatttgaaaaaatatgatatacaaata
caaaatttagaccaacctttattagatgtggatcatacatcagctagattaaatttttta
acaccaaggtatgttaatcgaaaaggtgttgctttaccaacaagtagtgaagaaacaaaa
cgagcaaaacgggaaaatttggaacaaaaacaaatccttgttgctgaattatgtgcaatt
catccctttccagcttcattatggagacaagcagtttgtttaccttgtattttgtataga
attaatgctctattacttgctaatcaaatacgatgtcaagttgctcaaatgataaattta
ggacaagaaaatttaaattctgattttgaatggccagcattagattttggatggagttta
gcagaagttctaaaaaaatctaaagaatctgaaaaagcaaaattaattagaaatgaatta
aattctacaaatgcaattgataccaaatgtcaaaatatatctaaagatattacagaaaat
ttatataaattagataaagaagatttaaatgaaagtaattatgaatttcaactaacgaat
gataaaataactgaaacagaacaacaaatatcaaatgatgaaaatgaattagaaattggt
acttggtcaagtgatatggcaatgaattctttagattttggagcaaataatttaaaatca
tttccgctaaatgtgactgttttaccaaatgaatttaattggaatgatattcgatatgga
tctcctgcatgcgaatcagattttgatggttatgaatcagatgatatttatagtgatgga
tttgctgatacttctgacgaaagtgaagatgaaaacagagggttgcgaatttcttatatg
ggagaaaatgttgcagaagctgtagaagatgaaaaacaaatatcaaaacaagaagtcaat
aagaaaattttggatttattagaaactgaaaaaaattcggatgaaattttatggtcatat
gcaaaagaaagcgaagttttaattacaaaacataaattagctcattatgaatttgctaaa
attaaagaatgtgaaataaaacaaaatggatcttttataccttataataataagattgta
attaaaagaaaaacttcatttagcttacattctgaagagaatttaccaaattataaatac
aaaacttatgtagaaactgtggttgataaatttactcaagaaatattgaataataatgaa
attatacaaccaattaaaaaaaattctaatacaccaaaatttacatatcatttcgatagt
aatctttttagcttcgattttcaaccaaaattagaaaatcatccaggtccaagtcctagt
ttaattttgcaagctttaactatgtccaatgcaaatgatggtattaatttagaacgttta
gaaactattggagattctttcttaaaatatgctataactacttatttgtattgtacatat
gataatatacatgaaggcaagcttagtcatttaagatctaaacaggtcagtaatttaaat
ttatacagattaggaagacaaaaaatgttgggtgagagcatgatagcaacaaaatttgaa
ccacatgataattggttacctccttgttattatgttccaaaagaacttgaacaagcatta
atagaatctggtgtaccttctactttatggaatcaagctgatattccagctttacaagct
gtaaatccttttgaaataactcagttagttcgagaaacagaacaaaaattgggtgttatg
aaaaatgaacttgaccgcaacgaaacaacacttccaaataatttagataatatgcgttgt
tttataccatataatttaattactcaacatagcattcctgataaaagtattgcagattgt
gttgaggcattaattggagcatacttaattgcttgtggacctagaggtgcattacttttc
atggcttggttagggattcatgttttacctacagaagaaattaatattattcaagaaact
gagccaaaagatagaattccaggaagcactccttttgtaaaaggaaaaaatgaaaaaggg
cagacaatatggacacagattcgttatggaaaattggaagaaccacaaaatcctttactt
cgatatattgttgacccagaagaagaactaaaactgatgcttgatggttatgaagaatta
gaaaaaaatataggatataagtttcatgatattagttatttgctacaagcatttactcat
gcatcatatcaacccaatagattaacagattgttatcagcgtttggagtttcttggagat
gcagttttagattatttaataacaagacatttatatgaagatgctcgacaacattctcca
ggtgctttaacagatttgcgatctgctttagttaataatactatatttgcttctttagct
gtgagatgtggatttcataaatattttcgacatctttctcctggtttaagtattgttata
aatcgtttcgttagaattcaagaagaaaatggacattccattagtgaagaatattattta
attggagaagaagaatgcgaagaagctgaagatgtagaagtaccaaaagcattaggtgat
gtttttgaatcattagctggtgcaatttatttagatagtggaatgtccttggatgcagta
tggagtgtttattatgctattatgaaaaatgaaattgaacaatttagcacaaatgttcct
aaatctccaattcgtgaattactggaattggagcctgaaacagcaaaatttggaaaacca
gaaaaattagccgatggacgaagagttagagttacagtggatgtttttggtaagggatct
tttaaaggaattggaagaaattataggattgcaaaatgtactgcagcaaaatgtgcatta
aaaaaattaaaaagaatgcaaaattattcaagggaaaaactatga
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integrated database retrieval system
