Apis laboriosa (Himalayan honeybee): 122715299
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Entry
122715299 CDS
T07817
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
alab
Apis laboriosa (Himalayan honeybee)
Pathway
alab03030
DNA replication
alab03410
Base excision repair
alab03420
Nucleotide excision repair
alab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122715299
03410 Base excision repair
122715299
03420 Nucleotide excision repair
122715299
03430 Mismatch repair
122715299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alab03032
]
122715299
03400 DNA repair and recombination proteins [BR:
alab03400
]
122715299
DNA replication proteins [BR:
alab03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122715299
DNA repair and recombination proteins [BR:
alab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122715299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
BRCT_2
AAA_30
RuvB_N
AAA_14
AAA_19
RNA_helicase
DUF1824
PTCB-BRCT
AAA_5
AAA_33
AAA_16
AAA_assoc_2
AAA_11
AAA_17
DUF7774
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
122715299
NCBI-ProteinID:
XP_043793318
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MPRDIRSYFQTAKINSSVVSTKAVKRRIISSDEDDEKPKPSFKQSKKTKILGKKVIASDS
EEDVKIVSPADIFGKNPIKRQEAPKISKQLQKKEARSHHDDDFERTLCQLDTSDIEQKYL
TETKVNKDSHKNNDENKEKIPVIAIDSDKNNDENEEKIPVKSKENVKKKKTFDKTNQEKN
NEKIYKLKSKKHSNNSNSSKSSSEDIEHENSEHNKIQHKKTSSKKMDTSDIYEEIIAKKK
QSATMYQQYLQRGGARNPGSKKIPVGAEYCLAGLSFVITGVLDSLEREEAEELIKQYGGR
ILHQVTKKTDYIIVGDQAGPSKLSKADSLNIKKISEDDLLDLIRTRPIGCIDDIHQSRTK
LKDKLKQKSEELEEESPSKKIKVIANEQTKNLTEIHKEISKKEIETSLKMSLQKEEYDTK
DIKIKSPIKKKHTEFKGSLIEDKKEIDDAKDIKTNILQDINSKISTQALVEKYKPKTMKQ
ILGQQGDKSIAKKLYAWLINWHKNQSGQVKHIKPNPWAKNSDGAFFKAALLSGPPGIGKT
TTVQVICNELGFDLIEFNASDTRSKKLLEEEVTELLSNTTLKNYFQDNKSKPSSKHVLLM
DEVDGMAGNEDRGGLQELIKLIKLTDIPIVCICNDRSHSKMRTLANYTFDLRFSKPRLEQ
IRAAMKSICFKENINITNEDLDLLIESTNQDIRQIINHLALFVGQIGFQEKSGKKHINKD
LKLGSWDVVKQVFSAEEQKHMNFNEKCDLFFHDYNIAPLFVQENYLLVIPETPKNKLLEK
IAESAESLALGDIIENCIRSNNAWSLLPIQACYSSVIPGAAMSGHISGQINFPAWLGRNS
KASKFNRLMQEITLHARLTTNASKDAINLDYIKYLRNTIIRPLTVDGIENIAIAIDVMNH
YHLLREDLDSLVEISLWPGQQDPMQVIDSKVKAAFTRAYNKNSVVLPYVVNSTSKKKAAT
NVQEEGLEEEEEEVDSDQNDNMDTDKMIKTKKPGTSKNTESKSEKKGKKNTDNISKRRRG
RGKAK
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgccaagagatatacgatcctattttcaaacagctaaaataaattctagcgtcgtttca
acaaaggctgttaaaagacgtattatttcatctgatgaggatgatgaaaaaccaaaacct
tcatttaaacaatctaagaaaacaaaaatattgggaaagaaagttattgcatctgattct
gaagaagatgttaagattgtttctcctgctgatatatttggtaaaaatccaataaagaga
caagaagcaccaaaaatatctaaacaattacaaaaaaaggaagctagaagtcatcatgat
gatgattttgaaagaacattatgtcaattagatacctctgatattgaacaaaaatattta
acagaaactaaagttaacaaagattctcataaaaataatgacgaaaataaagaaaagatt
cctgttatagccatagattctgacaaaaataatgatgaaaatgaagaaaaaattcctgtt
aagagtaaagaaaatgttaaaaaaaaaaaaacatttgataaaacaaatcaagaaaaaaat
aatgaaaaaatatataaattaaaatcaaaaaaacattctaataattctaatagttctaaa
agttcaagtgaagacattgaacatgaaaattctgaacataataaaattcaacataaaaag
acatcttctaaaaaaatggacacttctgatatatatgaagaaataattgcaaagaaaaaa
caaagtgctacaatgtatcaacaatatcttcaaagaggaggagctagaaacccaggctca
aagaaaattcctgttggtgctgaatattgcttagcaggattaagttttgtaataactgga
gttttagattctttagaaagagaggaagctgaagaacttatcaaacaatatggtggacga
attttacatcaagttacaaagaaaactgattatattatagtaggtgatcaagctggtcca
tcaaaattatcaaaggctgatagtttaaatataaagaaaatatcagaagatgatttatta
gatctgatacgtacacgccctataggttgcattgatgatatacatcaatctcgtacaaaa
ttaaaagacaaattaaagcaaaaatctgaagaattagaagaagaatcaccatcaaagaaa
ataaaagttattgcgaatgaacaaacaaaaaatttaacagaaatacacaaagaaataagc
aagaaagaaatagaaacatcattgaaaatgtcactacaaaaagaagaatatgatactaaa
gatataaaaataaaatctccaattaaaaagaaacatactgaattcaaaggatcactcata
gaagacaagaaagaaattgatgatgcaaaagatataaaaacaaatattttacaagatata
aatagtaaaatatcaacgcaggcattggttgaaaaatataaaccaaaaactatgaaacag
attttgggacaacaaggagataaaagtattgctaagaaattgtatgcttggttaataaat
tggcataaaaatcaatctggtcaagtaaaacatataaaacctaatccatgggcaaaaaac
agtgatggagctttctttaaagcagctctattatctggtcctcctggaattggaaaaacg
acaactgttcaagttatttgcaatgaattaggttttgatcttatagaatttaatgcatca
gatactagaagtaaaaaacttctagaagaagaagtaacagaattattatctaatactaca
ttaaaaaattattttcaagataataaaagtaaaccatcatcaaaacatgttttattaatg
gacgaagtggatggaatggctggtaatgaagatcgtggtggtctacaagaattaattaaa
ttgatcaaattaactgatatacctattgtttgtatttgtaatgatcgaagccattccaaa
atgagaacacttgctaattatacatttgatcttcgattttcaaaacctagattggaacaa
attagggctgcaatgaaatctatatgtttcaaagaaaacattaatatcacaaatgaagat
cttgatttattaattgaatcaactaatcaagatattcggcaaattataaatcatttagca
ttatttgttggacaaattggttttcaagagaaatctggaaaaaaacatataaataaagat
ctgaaattgggttcttgggatgttgtaaaacaagtattttctgcagaggaacaaaaacat
atgaatttcaatgagaaatgtgatctatttttccatgattataatatagcaccattattt
gtacaagaaaattatttactggttatacctgaaacaccaaaaaataaattattagaaaaa
atagctgaaagtgctgagagtttagcattgggagatataattgaaaattgtataagaagt
aataatgcctggtctcttttaccaatacaagcttgttattcttctgttatacctggggca
gcaatgtctggtcacattagtggtcagattaattttccagcttggcttggacgtaattca
aaagccagtaaatttaatcgtttaatgcaggaaatcactttacatgctcgtttgactact
aatgcaagtaaagatgctataaatctggattacattaaatatctcagaaataccattatt
agacctttaacagttgatggtattgaaaatatagctattgcaatagatgttatgaatcat
tatcacttactcagagaagatttagattctttagtggaaatttctttatggcctggtcag
caagatccaatgcaagttatagatagtaaagtgaaagctgcctttacaagagcatataat
aagaattctgtagttcttccatatgtagtgaatagtacatcaaaaaagaaagcagcaaca
aatgtacaagaagaaggtttagaagaggaagaagaagaagtagattctgatcaaaatgat
aatatggatacagataaaatgattaagacaaaaaaacctggcacaagtaaaaatacggaa
tcgaaaagtgaaaagaaaggcaaaaagaatactgataacatttctaaacgccgaagagga
cgaggaaaagcaaaataa
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