Apis laboriosa (Himalayan honeybee): 122715372 Help Entry 122715372         CDS       T07817                                  Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism alab  Apis laboriosa (Himalayan honeybee) Pathway alab03018   RNA degradation Brite KEGG Orthology (KO) [BR:alab00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     122715372  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:alab03019]     122715372 Enzymes [BR:alab01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      122715372 Messenger RNA biogenesis [BR:alab03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      122715372   mRNA degradation factors    3'-5' decay     Ski complex      122715372 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD Helicase_C DEXQc_Suv3 MTR4_beta-barrel ResIII ATPase_2 RSC4_Ig_like DUF3067 Motif Other DBs NCBI-GeneID:  122715372 NCBI-ProteinID:  XP_043793448 LinkDB All DBs Position Unknown AA seq 1225 aa AA seqDB search MDVKNDTNKQMLEFELPPIWPDIRTELREYIECLDNLPIYHLDNAQCYWPRKPDILSLLN CDIAPLGTTLKFNRDPVTGKLGEMHEVPLKSAGETARNSMSMTRAPGPPSDIIRGNTSNI PFWPGGFDEPEMIVDSLIEEIDFENNLRTLAKGFSAGIEFKSDNYTPKEKTIQEQESLES EKNEIESTADKINLMAIVEEEQNELDFWKLETKKVKEETKTKTSDISESAFDEITSLLEE TNIPILNISEKRVETITEWAEQLDVSVPLTDFEKRIPELAMSFPYELDIFQKQAILKLEE GCNVFVAAHTSAGKTTVAEYAIALSQKHMTKVIYTSPIKALSNQKYRELKRKFESVGLLT GDLQINPNASCLIITTEILQSMLYCASEVLRDLEFVIFDEVHYINNDERGHVWEESVILL PQTVTIVMLSATVPNPLVFADWVGRTKKKKTYVISTLKRPVPLQHYLYTGTDGKTKDDKF LVLGESGQFLLDGWYKATNSKNSKNQVNKNIKDVKKISMHQQMTPKQEQVLWSAFISHLK TQNMLPVVVFMLSRKRCDMSAVLLRNVDLTTETEKHTIRAFFQNNIRHLKGTDRQLPQVL MMQELLESGIGIHHSGILPILKEIVEMLFQTGVVKLLFATETFAMGVNMPARTVVFDSIK KYDGNNFRILYPSEYVQMAGRAGRRGHDTTGMVIVMCRTSVPHFNELKNMMCGQAQNLES KFKVTYSMVLNLRRLNESVTVEAMMRRSFKESPVVINQNNYKMQLQEVENELSKLPPLTD LQKKLSDFYRVAVDYLEYLKYLKPYFYETQKKAVKSLTPGRILLISYESHYNKLALLLGT VQNKGNRQYRVLVLKNSDISKSIKEIEEKNQKINKSDKWYDIVALTKKEIFIPVGIPSDE VLTIDAWNILEITNCQIKIDYNLVLANWEKRQIPRFKNEEPSQTYKTAMQELMTLSLNAS HNSSILKPYLEMKMNYDVDRKLQHLFDLKKAVYDMKCREILNFEEQFEIVYERSELESKK NKLQLKLSDEGLSLYPEYTNAVALLKDLGYIDNDERVALKGRVALQMGNNELLITELILK NVLTVLQPAEIAALLSALIFQQRTDVEPNLTPELKRSCEEIKEIHAELEALEQHYQLVTL QPLNFGLVEVVYDWAQAKSFAEIMEKTDVQEGIIVRCIQQLSETLRDVKNAATTIGDPVL KEKMEEASTVIKRDIVFAASLYTQN NT seq 3678 nt NT seq  +upstreamnt  +downstreamnt atggatgtaaagaatgatacaaataaacaaatgttagaatttgaattgccacctatttgg cctgatattagaactgaattaagggaatatatagaatgtttggataatcttccaatatat catttggataatgcacaatgttattggccaagaaaacctgatattctttctcttttgaat tgtgatatagcaccacttggtaccacattaaaatttaatagagatcctgttactggcaaa cttggagaaatgcatgaggtacctttgaaatcagcaggtgaaactgctagaaattctatg tctatgacacgtgcaccaggtccaccttctgatattattagaggaaatactagtaatatt ccattttggccgggtggttttgatgaacctgagatgatagtagactcattaatagaggaa attgactttgaaaataatttaagaacattagcaaaaggatttagtgcgggtatagaattt aaaagtgataattatactccaaaagaaaaaacaatacaggaacaagaatcattggaatca gagaaaaatgaaattgaaagtacagcagacaagatcaatttaatggctattgtagaagaa gaacaaaatgaacttgatttttggaaattagaaacaaaaaaagtaaaggaagaaacaaaa accaaaacttcagatatttcagaatcagcatttgatgaaattacttcattattagaagaa acaaatatacctattttaaatatttcggaaaaacgtgtggaaactataacagaatgggca gaacaattagatgtatctgttccacttactgattttgaaaaacgaattcctgaattagca atgagttttccatatgaattagatattttccaaaaacaagctattcttaaattagaagaa ggttgtaatgtgtttgttgctgcacatacatctgctggaaaaacaactgtagcagagtat gctatagcattaagtcaaaaacatatgacaaaagtcatttacacgtctcctataaaagca ctttcaaatcaaaaatatcgcgaacttaaaagaaaattcgaaagcgtaggattattaaca ggagatttacaaattaatccaaatgcatcatgtcttatcataaccacggaaattttacaa tctatgttatattgcgcatctgaggttttaagggatttagaatttgttatatttgacgaa gtgcattacattaataatgatgaacgtggtcatgtttgggaagaaagtgtgatacttcta ccacaaacagttactatagtaatgttgtctgcaactgtgccaaatcctctagtatttgct gattgggttggtcgtacaaaaaaaaaaaagacatatgtaataagcactctaaaacgacct gtaccccttcaacattatttatatactggaactgatggtaaaactaaagatgataaattt ttagtattgggtgaaagtggtcaatttttattagatggatggtataaagcaacaaattct aaaaattcgaaaaatcaagtaaataaaaatattaaagatgttaaaaagatatctatgcat caacaaatgactccgaaacaagaacaagtattatggagtgctttcataagtcatttaaaa acacaaaacatgttgcctgtcgttgtttttatgttatcacgaaaacgatgcgacatgagt gctgtattattaagaaatgttgatctcacaactgagactgaaaaacacactattcgagct ttttttcaaaataatattcggcatttaaaaggtactgatagacaattaccacaagtgctt atgatgcaagaattattagaaagtggaattggtatccatcatagtggtatattacctatt ttaaaagaaatagtggaaatgcttttccaaactggagttgtaaaattattgtttgcaaca gaaacatttgcaatgggtgttaatatgccagcgcgtactgtagttttcgattctataaaa aaatatgacggtaataatttccgaatactttatccttctgaatatgtacaaatggctggt cgagctggtcgtagaggtcatgatacaactgggatggttatagttatgtgtcgaacatct gtgccacattttaacgaattaaaaaatatgatgtgtggacaagctcaaaatttagaatcg aaatttaaagtaacatattctatggtattaaatctaagaaggctaaatgaatcggtgaca gtcgaagcaatgatgcgaagatcttttaaagaatcaccagtagttataaatcaaaataat tataaaatgcaattacaagaagtggaaaatgaattatcaaaattgccacctctaaccgat ttacaaaagaaactttccgatttttatcgagtagctgttgattatttagagtatcttaag tatttgaaaccttatttttacgagacacaaaaaaaagcagtaaaaagtttaacacccgga agaatattgcttatatcatatgaaagtcattataataaattagctttattattaggcaca gttcaaaataaaggtaatagacaatacagagtattagttcttaaaaattctgatatatca aagtctatcaaagaaatagaagaaaaaaatcagaaaattaataaatccgataaatggtat gatattgttgctttaacaaaaaaagaaatatttataccagttggaattccatcagatgaa gtattgactatagatgcatggaatatattagaaataacaaattgtcaaattaaaatagat tataatttggttttggcaaattgggaaaaaagacaaatacctagatttaaaaacgaagaa cctagtcaaacttataaaacagcaatgcaagaattaatgactctatcgcttaatgcttct cataattcttctatattaaaaccatatttggagatgaaaatgaattatgatgttgatagg aaattacaacatttattcgatttaaaaaaagctgtatatgatatgaaatgtagagaaata ttgaattttgaagaacaatttgaaattgtatatgaacgaagtgaattggaaagcaaaaaa aataaattacaattaaaacttagtgatgaaggattaagtttgtatcctgaatatacaaat gctgttgcacttcttaaagatttaggatatatagataatgatgaaagagttgcattgaaa ggtcgagtagctttacaaatgggaaataacgaattactaattacagagcttattcttaaa aatgtattaactgtacttcaaccagctgaaatagcagcattgttatctgctttaatattt caacaacgaactgatgttgaaccaaatttaacaccagaattaaagaggagttgtgaagaa ataaaagaaatacatgctgaattagaagctttagaacaacattatcaattagtaacatta caaccactaaactttggtttagtagaggtagtttatgattgggcacaagcgaaatcattt gccgaaattatggaaaaaacggatgtacaagaaggaatcatagtacgatgtattcaacaa ttaagtgaaacgttacgagatgtaaaaaatgcagctactactataggtgatcctgtttta aaggaaaaaatggaagaagcttctactgttattaaaagagatattgtttttgctgcatcc ttgtatactcaaaattaa

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