Apis laboriosa (Himalayan honeybee): 122716254
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Entry
122716254 CDS
T07817
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
alab
Apis laboriosa (Himalayan honeybee)
Pathway
alab03440
Homologous recombination
alab03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122716254
03450 Non-homologous end-joining
122716254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alab03032
]
122716254
03400 DNA repair and recombination proteins [BR:
alab03400
]
122716254
DNA replication proteins [BR:
alab03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
122716254
DNA repair and recombination proteins [BR:
alab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
122716254
BRCA1-C complex
122716254
NHEJ (non-homologous end-joining)
MRX complex
122716254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_15
AAA_21
SMC_N
SbcC_Walker_B
Rad50_zn_hook
AAA_29
DUF7716
AAA_5
AAA_19
AAA_16
ABC_tran
AAA_13
AAA_22
Motif
Other DBs
NCBI-GeneID:
122716254
NCBI-ProteinID:
XP_043795091
LinkDB
All DBs
Position
Unknown
AA seq
1376 aa
AA seq
DB search
MSRIRRLSIRGIRNFGDEKEEALIRFSRPLTLILGPNGTGKTTIIEALKFATCGEFPPGS
DRGKSFIHDPTLSTTSSVRGVIRAEIIDVLGNTYTICRTIESTKANVTRFKTLDSALSRV
NKDTKEVISITNRCTNVDTELTLAMGVSKPILDYVIFCHQEDLSWPFQDGKKLKERFDEI
FDSAKFNKALESIMKLIKDLKQRVNILKEQKQNYQLIVNEVIDKETKLEDNKKRLENSKI
KIEEFNKELEPVIQKIKKLEKIDVEYKDLQNEQKRKKAEYDMFKQQLDSLKEDLQNIFEG
TTEKLLKEIESYDEELIGKINEIDEFKKKLKDIAEKESTISNKLANERVTNGSLRQQIKD
HEKKVILRNQILNESLSSWNLNIVDSNVSELEVIAFTKRLQEKMRELEHKLEENKIKRGE
EEKELQKTVDILHSKYLKLDTEKNHEENEIIETRKEIDKIKLDIMQLSAESNKLNFIESK
LQKVQIRIQQLNDAIDMDTMKKEIADKIKIRDETDTLLNTIDEEINLLLKQSSLQAELEL
NKSTLIIKEKEIEKLKKKHEEKIISLLDIKDLSQIKLKNNFDMVQEELINEIESINQKIR
TEEHQIATLETTISHIEHELQNKKKEINLNKEKISLICSYKNFDEVLLLQSKKVKDLQDK
RGMYAHQSAAYKEYMKQLRNTNPCCPLCHRGFDKIETITTLLKEMETEIENHPNRLKECE
KELKVQQEKYDKMLQLKPVVERIIQLEEIELEKLTNNLEKFKNKLNESRTIAIELKTKKS
NPEKKLVMCKDIIGDVMLWDTYIDDIFKLKQIIDNFHIRMTAAGIKTKRSLQEAQTEREE
LKISLKKIRENIERLQFEINMHNEKLYNSEQEQNTLHKEQLKIQLDMQKLKELKDNQEIL
YLKEISLGKSIDTLREKVTLSETELNSGLDKLEKKKKDNWEKQETDRKLITEGSRRLSDL
QKMQDDVDSFIYRKIPESLECSESKIKSYEKLLNELFCKKNDMETTINKLKEEMTRQEVR
KRELSDNLKLREIQEIINNLQEQYSNIKEKLNTINYSEIFDEWQNLQNREQTILRQKNMI
KGNQEELERTVQQYVQELKKDIYKQARKNYKSKCIELTVVEESILNLKEYSKVLDTAMIQ
YHEERMATVNRIIKQLWKLVYTGTDTTSIEIRTDATEGIGGTKRTYNYKLVQMKHGHEID
MKGRCSAGQKVLASIIIRLALAETFCKDCGILALDEPTTNLDQENADSLANTLATVVKLR
SPQKNFQLIVISHDEKFLFKLAELSSNKGFYQLYRKQTGYSTIKYCLVENQYHFASNDIK
EESDEEVDEHSLRDKLQYEINLGGKIHNKQIYNKKRNIEDDDFTENRISKRRYVFQ
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgaataagaagactttctattcgtggtattcgtaattttggtgatgagaaagaa
gaagctttgattagattttctcgtcctttaacacttattcttggtccaaatggtactgga
aaaacaacaattattgaagctctcaaattcgctacttgtggtgaatttccacctggctca
gatcgcggaaaatcttttatacatgatccgactttatcaacaacttcatcagttcgaggt
gttataagagctgaaataattgatgtattaggtaatacatatacaatatgtagaacaata
gaaagtacaaaagctaatgtgacaagatttaaaactcttgatagtgctttaagtagagta
aataaagatactaaagaggtcatatcaataactaatcgatgtactaatgttgatacagaa
cttacattagcaatgggagtttctaaacctattttagattacgtaattttctgtcatcaa
gaagatcttagctggccttttcaagatggtaaaaaattaaaagaaagatttgatgaaatc
tttgatagtgctaagtttaataaagctcttgaaagtattatgaaattaattaaagatttg
aaacaaagagtcaatatattgaaagaacaaaaacaaaattatcaacttattgttaatgaa
gtaatagataaagaaacaaaacttgaagataataaaaaacggttagaaaattctaaaatt
aaaattgaagaatttaataaggaattagaacctgtgattcagaaaattaaaaaattggaa
aaaatagatgttgaatataaagatctacaaaatgaacaaaagaggaaaaaagcagaatat
gatatgtttaaacaacaattggatagtttaaaagaagatttgcagaatatatttgaaggt
actacagaaaaattattaaaagaaatagaatcatatgatgaagaattaattggaaaaatt
aatgaaattgatgagtttaaaaagaaattaaaagatattgctgaaaaagaatctacaata
tcaaataaattagccaatgaaagagtaactaatggttctttgagacaacaaattaaagat
catgagaaaaaagttattcttcgcaatcaaatattaaatgaatcattatcttcctggaat
cttaatattgttgattcaaatgtatcagaattagaagtaatagcttttactaaaagacta
caagaaaaaatgagggagctagagcataaattagaagaaaataaaataaaaagaggagaa
gaagaaaaagaattgcaaaaaacagttgatattttacatagtaaatatttaaaattagat
acagaaaaaaatcatgaagaaaatgaaataattgaaacaagaaaagaaattgataaaata
aaattggatattatgcagcttagtgcagaatcaaataagttgaattttattgaatcaaaa
ttacaaaaagtacaaataagaattcaacaattaaatgatgcaatagatatggatactatg
aagaaagaaattgctgataagattaaaattcgagatgaaacagacacacttttaaataca
attgatgaagaaataaatttattattgaaacaaagttcactacaagctgaattagagtta
aataaatctacattgattattaaagaaaaagaaatagaaaaattgaaaaagaaacatgaa
gaaaaaataatttctttacttgatatcaaagatctatctcaaatcaaattaaaaaataat
tttgacatggttcaagaagaattgataaatgaaatagaatctataaatcaaaaaattcga
acagaagaacatcaaatagctacattagaaacaacaatatcacatattgaacatgaactt
caaaacaagaagaaagaaataaatttgaataaagaaaaaatttcattaatttgttcttat
aaaaattttgatgaagtattattattgcaatcaaagaaagtaaaagatcttcaagataaa
aggggaatgtatgctcatcaaagtgcagcttacaaagaatatatgaaacaattaagaaac
acaaatccttgttgtcctttatgtcacagaggttttgataaaattgaaactattacaact
ttattaaaagaaatggaaactgaaatagaaaatcatccaaatcgtttgaaagaatgtgaa
aaagaattgaaagtacaacaagaaaaatatgataagatgctacaactaaaacctgtcgtt
gaaagaataatacaattagaagaaattgaattagaaaaattaacgaataatttagaaaag
ttcaagaataaattgaatgaatctcgaacaattgcaatagaattaaaaacaaaaaaatct
aatcctgaaaaaaaattagtaatgtgtaaagatattataggtgatgttatgttatgggat
acttacattgatgatatttttaaactaaaacaaataattgataattttcatattcgtatg
actgctgcaggtattaaaacaaaacgtagtcttcaagaagctcaaactgaaagagaagaa
ttgaaaatatctttaaaaaagattcgtgagaatattgaaagattacaatttgaaataaat
atgcataatgaaaaattatataatagtgaacaggaacagaatacattacacaaagagcag
ttaaaaatacaattagatatgcaaaaattgaaagaattgaaggataatcaagaaatttta
tatttgaaagaaatttctcttggaaaatcaattgatacattaagagaaaaagtaacttta
tcagaaactgaattaaattctggacttgataaattggaaaaaaaaaaaaaagataattgg
gaaaaacaagaaaccgatagaaaattaataacagaaggaagtagacgtttatctgattta
cagaaaatgcaggatgatgttgatagctttatatatcgtaaaattcccgaatctttggaa
tgttctgaatcaaaaataaaaagttatgagaaattacttaatgaattattttgtaaaaaa
aatgatatggaaacaacaattaataaattaaaagaagaaatgactcgtcaagaagtacga
aaaagagaattgtcagataatcttaaacttcgcgaaattcaggaaattattaacaattta
caagaacaatattcaaatataaaagaaaaattaaatactataaattattctgaaatattt
gatgaatggcaaaatttacaaaatcgagagcaaactatacttcgacagaaaaatatgatc
aaaggtaatcaagaagaattagaaagaacagtacaacaatatgttcaagaattgaaaaaa
gatatatataaacaagctcgtaaaaattacaaaagcaaatgtatcgaattaacggttgta
gaagaatctatattaaatttaaaggaatatagcaaagtattggatacagctatgatacaa
tatcatgaagaacgtatggccacagttaatagaatcataaaacaattatggaaacttgta
tatactggaacagatacaacttctatagaaattcgtacagatgcaactgaaggaataggt
ggtacaaaaagaacatataattataaattagttcaaatgaaacatggtcatgaaatagat
atgaaaggtcgttgtagtgctggtcaaaaagttttggcatcaataattataagacttgct
ttagcagaaacattttgtaaagattgcggaattctcgcactggatgaaccaacgacaaat
ttagatcaagaaaatgctgatagtctagcaaatacattggctacggttgttaaattacga
tcacctcagaaaaattttcaattgattgtaattagtcatgatgaaaaatttttattcaaa
ttagctgaattaagcagtaataaaggcttttatcaactttatcgtaaacaaactggttat
tcaacaattaaatattgtttagtagagaatcaatatcattttgcatcaaatgatataaaa
gaagaatctgatgaagaagtcgatgaacattctttacgagataaattacaatacgaaata
aatttaggagggaaaatacataataaacaaatttataataaaaaaagaaacattgaagat
gacgattttactgaaaacagaatatcaaaaagaagatatgtttttcaataa
DBGET
integrated database retrieval system