Apis laboriosa (Himalayan honeybee): 122716322
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Entry
122716322 CDS
T07817
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
alab
Apis laboriosa (Himalayan honeybee)
Pathway
alab03013
Nucleocytoplasmic transport
alab03015
mRNA surveillance pathway
alab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122716322
09122 Translation
03013 Nucleocytoplasmic transport
122716322
03015 mRNA surveillance pathway
122716322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alab03019
]
122716322
03041 Spliceosome [BR:
alab03041
]
122716322
Enzymes [BR:
alab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122716322
Messenger RNA biogenesis [BR:
alab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122716322
Spliceosome [BR:
alab03041
]
Complex C
Other components
EJC/TREX
122716322
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122716322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122716322
NCBI-ProteinID:
XP_043795229
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MADNDDLLDYEDEEQTEQLVDGSRDTPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIIDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTR
ELAFQISKEYERFSKYMPHVKVGVFFGGLPIQKDEEVLKNTCPHIVVGTPGRILALVRNK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcagataacgatgatcttttggattatgaggatgaagaacagactgaacaattagtt
gatggaagcagggatacacctgctaaaaaagaagttaaaggcacatatgtatctattcac
agtagtggatttagagattttcttcttaaacctgaaatattacgcgcaattattgattgt
ggttttgagcatccatctgaagttcaacatgaatgtattcctcaagcagttcttggcatg
gatatattatgtcaagcaaaatctggtatgggaaaaactgctgtatttgtattagcaaca
ttacagcaattagaattaactgaaaaccaagtttatgttcttgtcatgtgccacacacga
gaacttgcttttcaaataagcaaagaatatgaaagatttagtaaatatatgcctcatgta
aaggttggagtattttttggtggtttgccaattcagaaagatgaagaagttctgaagaat
acatgtcctcacattgttgttggtactccaggtcgcatccttgctcttgttcgaaataaa
aaattaaatttgaaacatttgaagcactttattctcgatgaatgtgacaaaatgctcgaa
ttattagatatgcgtagggacgtacaggaaatatttagaagcactccacacggcaaacaa
gtcatgatgttcagcgctacattgtccaaggagatacgtcctgtctgcaaaaaatttatg
caagatcccatggaagtctatgtggatgatgaagcgaaactcacgttgcatggtctacaa
caacattatgtgaaacttaaagaaaatgaaaagaataagaagctatttgaattgcttgat
gtacttgaatttaatcaggttgttatctttgtaaaatctgtacaaaggtgcatggccttg
gcacaacttttaacagaacaaaattttcctgcaattggtatacatagaggtatgactcaa
gaagaacgattatcaaggtatcagcaatttaaagatttccaaaaacgaattcttgtagct
acaaatttatttggacgtggtatggatattgagcgtgtaaacatagtatttaattacgat
atgccagaagattcagacacatacttacatcgagtagctagagccggtcgttttggtacc
aagggtcttgccattacattagtaagtgatgaaagtgatgctaaaatattaaatgatgtt
caagaacgatttgatgttaacattacggaattaccagatgaaatagatttagcttcatat
atcgaaggacgataa
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