Apis laboriosa (Himalayan honeybee): 122716526
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Entry
122716526 CDS
T07817
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
alab
Apis laboriosa (Himalayan honeybee)
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alab04147
]
122716526
00535 Proteoglycans [BR:
alab00535
]
122716526
00536 Glycosaminoglycan binding proteins [BR:
alab00536
]
122716526
Exosome [BR:
alab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122716526
Proteoglycans [BR:
alab00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
122716526
Glycosaminoglycan binding proteins [BR:
alab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122716526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
DUF1554
Motif
Other DBs
NCBI-GeneID:
122716526
NCBI-ProteinID:
XP_043795621
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MRSRLQSLIFALFCVTRVNADFFAEKKEINYDLLEAAVASVDTDDNNLYIDDGLDGFPSF
GFRPGSEVKQPYRLYLPEKLPAEFTLAATFKPMSFRTSYLFAVLNPFETVVQLGIRISDG
PGTNQNVSLVYTNSDLHSHSEEVAKFTVPKLSRKWSKIVIRVSTTDVTLYLNCHEMARQR
VTRIPLELVFDTASTLYIAQAGPHIQEKYDGLLQSLKLYPGHPADLVKCTADFNFDQDVD
LGSGEIDNEVIDNGSGFDINLTDIGRDDDEDRSEESNPPPFITPPPPNPDYKGPKGEKGD
KGDKGESVRGPPGPPGPPGQDEGPPGKKGEPGTCTCNATALMASFTMPKMIQGPKGEQGV
PGQEGKQGQMGLTGVAGPPGERGLEGPQGPKGDKGDVGISGPEGPQGQKGEPGRDGIPGE
KGAQGPPGPPGKGEFSGYDPSWKPRGIYRTEGITMRPGLPGQKGEAGLPGSPGPKGETGI
AGAKGNKGEPGHKGAKGDHGNEGARGIQGSKGEPGAPGAPGLPGAPGENGRPAEKGDKGD
TGPEGKPGPPGAPGPPGLPGLSGPGGVNVGESMLREKGDKGEGGARGYKGDKGTKGEKGD
KGDSGPAGIPGVNGIQGPQGNKGEPGKDGVAGVQGIVGAKGEKGERGPPGATAIASSGDY
ITIKGEKGAEGKRGRRGRPGPPGPVGPPGKPGAMGEIGLPGWVNTMKGRPGTPGLPGPVG
PAGPKGEKGEPGTPSPYGVSVGVKGDKGDDGFPGIPGQPGREGQRGPPGPPGPPGPPSQG
NYIPVPGPPGPPGPPGPPGLSLIGQKGEPGIGRSHIFGERDYYGVRQVQSVKKKHVPYPT
LQGPRTSLDELKALRELKQLKELKEHLGAGTTATRGPLESTTKIVPGAVTFQNTEAMTKM
SAVSPVGTLAYIIDEQALLVRVNNGWQYIALGSLLPITTPAPPTTSPPPMNPPFEASNLI
NQIPVKADGTGWYPRMLRMAALNEPFTGDMHGVRGADYACYRQAKRAGLRGTFRAFLSSR
VQNVDSIVRLGDRDLPIVNIKGDVLFNSWKEMFNGNGAYFSQNPRIYSFNGKNILTDFAW
PEKVAWHGSHKLGDRAMDTYCDAWHSSSSDRYGLGSPLTGGRLLEQVRYSCDNKFALLCI
EVTSETTRRRRNAEIVEDEDEMSENDYKEYLDSLMED
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgcggtctagattgcagtcgctgatattcgccttgttctgtgtgacgcgcgtcaacgcg
gactttttcgccgagaaaaaagaaataaattatgatctactcgaggctgccgtggcgtct
gtcgatacggacgacaataatttatacatcgacgatggtctcgatggatttccaagtttt
ggtttccgacccggatccgaagttaaacaaccctatcgattatacttgccggaaaaattg
ccagcagagttcacccttgcggcaactttcaaaccgatgtcctttaggaccagttatctc
ttcgcggttttgaaccctttcgagacagtggtacaattagggattcgtatatcggacgga
ccaggcaccaatcaaaatgtctcattggtctacaccaattccgacttgcattcgcattca
gaagaagtggcgaaattcacggtgccgaagttgtcgagaaaatggtctaaaatcgttatc
agagtatcaacgacggatgtcactttgtacctgaattgtcacgagatggccagacaacga
gtgacaagaattcctctggaattggtgttcgacacggccagcacgttgtacatcgctcaa
gctggacctcatatccaagaaaagtacgacggtctactgcaatccttgaagctctatccc
ggacatccagcggatttggtaaaatgcacggccgactttaacttcgatcaagatgtggat
ctcggctcaggtgaaatcgataacgaggtgatcgataatggttcaggatttgatattaat
ttgacagacatcggacgagacgatgacgaagacagaagcgaggaaagcaatccaccgcca
ttcatcacaccccctcctcccaacccggactacaagggaccgaaaggtgagaaaggtgat
aaaggcgacaagggtgagagcgttaggggacctccaggtcctcctggtccacctggtcaa
gatgagggtccgccagggaagaaaggagaacccggcacgtgcacctgcaatgcaacagcc
ctgatggcatcctttacgatgccaaagatgatccagggaccgaaaggagaacaaggggtg
ccggggcaagaaggaaaacaaggccaaatggggctgacgggtgttgctgggccaccagga
gagagaggattagaagggccacaggggcccaagggagataaaggtgacgtgggaatatcg
ggaccggaaggtcctcaaggccaaaaaggcgaacctggccgcgatggaataccaggagaa
aagggcgctcaaggacctccaggccccccaggaaaaggagaattctccggatacgatccc
agttggaaacctcgaggcatttataggacggaaggaatcacgatgaggccaggattgcca
gggcagaaaggcgaggcaggccttccgggaagtccaggaccaaaaggagagacgggaatc
gctggtgccaaaggtaacaaaggcgagccaggtcataaaggcgcgaaaggagatcacggg
aatgagggtgctcgaggaattcaaggatcgaagggtgaacctggtgcaccgggagcgccg
ggtctccctggtgcaccaggtgagaatggaaggccagctgaaaagggtgataaaggagac
acagggccagaagggaaaccaggccccccgggagcgcctggaccgccaggattgcctgga
ttaagcggtcctggaggagtaaacgttggagaatcgatgttaagggaaaaaggcgacaaa
ggagagggtggtgcgcgtggttacaaaggagacaagggcaccaaaggcgagaagggagat
aaaggtgattctggaccagcaggaattcccggtgtaaatggtattcaaggaccgcaaggg
aacaaaggcgagccaggcaaggatggagttgccggtgttcagggaatcgtgggtgcaaaa
ggtgaaaaaggtgagagaggtccgccaggagccaccgctatagcgagttccggagactac
atcacgatcaagggtgaaaagggcgcggaggggaagagggggagaagaggacgccctgga
ccaccgggacccgtcggcccacctggaaagccgggagcgatgggagaaattgggttgcct
ggatgggtgaataccatgaaaggtcgtcctggaactcccggacttcctggacctgttgga
ccagcggggcccaagggagaaaaaggagaaccgggcacaccgagcccttatggagtctct
gtcggtgtaaagggtgataaaggagacgatggttttcctggaattccaggacaaccagga
agggaaggtcaaagaggaccgccaggacctccaggaccacctggaccaccatctcaagga
aactatattccagtcccgggacctccaggacctcctggaccaccaggtccacccggatta
tctttaatcggacaaaaaggagagccaggaatcggcagaagtcacatctttggtgaaaga
gattattatggagttagacaagttcaaagtgttaaaaaaaaacacgttccatatcctacg
ctgcaaggaccaagaactagtctagacgaattgaaagcactgcgggaattaaaacaattg
aaggaactaaaagaacatttaggtgctggaacaactgcaaccagaggtcctctcgaaagc
acaacaaagattgtaccaggagcagtaacttttcaaaataccgaagctatgacgaaaatg
tctgccgtgagcccagttggaacattagcttacattatagacgaacaagcactactcgtt
agagtgaataatggctggcaatacattgcattgggctcacttttaccaataactacacca
gcaccacctactacatcaccacccccgatgaatccaccttttgaggcttctaatctgatc
aatcaaatacccgtaaaagcagacggaacaggatggtatccacgaatgttacgaatggct
gctttgaacgaaccctttaccggggacatgcacggtgtacgaggagctgactacgcttgt
tatcgacaagcgaagcgagctggtttgaggggtacattccgcgcattcctcagttctaga
gttcaaaatgttgacagcatcgtgaggcttggagatcgagatttgcctatcgttaacata
aagggggacgttctcttcaactcatggaaggaaatgttcaacggaaacggggcctatttc
tcacaaaacccaagaatctatagttttaatgggaaaaatatcctcactgattttgcatgg
ccagaaaaagtggcatggcacggatcacataaattaggagaccgagcaatggacacgtat
tgcgacgcttggcattcaagtagttcggatcgttatggattaggatcaccgttaacagga
ggacgcctcttggaacaagttcgttattcgtgtgacaacaagttcgcgctactctgtata
gaagtaaccagcgagaccacaaggaggagaagaaacgccgaaattgtggaggacgaggac
gagatgtcggaaaacgattacaaggaatacttggattctctcatggaagactaa
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integrated database retrieval system
