Apis laboriosa (Himalayan honeybee): 122716622
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Entry
122716622 CDS
T07817
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
alab
Apis laboriosa (Himalayan honeybee)
Pathway
alab04120
Ubiquitin mediated proteolysis
alab04137
Mitophagy - animal
alab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122716622
04120 Ubiquitin mediated proteolysis
122716622
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122716622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alab04131
]
122716622
04121 Ubiquitin system [BR:
alab04121
]
122716622
03029 Mitochondrial biogenesis [BR:
alab03029
]
122716622
Enzymes [BR:
alab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
122716622
Membrane trafficking [BR:
alab04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
122716622
Aggrephagy
Other aggrephagy associated proteins
122716622
Xenophagy
Other xenophagy associated proteins
122716622
Ubiquitin system [BR:
alab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
122716622
Mitochondrial biogenesis [BR:
alab03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
122716622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
zf-RING_12
ubiquitin
IBR_1
IBR
Rad60-SLD
Rcat_RNF216
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
122716622
NCBI-ProteinID:
XP_043795830
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MSFFFGFIRNVFLKMLQLIWFSKRKITNSLSIYVKTNTGNTFAVDLDPKWDIKNVKEIVA
SQMGTSPEDIKIIFAGKELHNSTIIEECDLGQQSILHAIRTPSQRLNKNKNTNIIDESLE
ISELNDSGGKPMNETLTDLPLDESDLQENSSMEEKQENRAHFFVFCTTPCKSVTVGKLRV
RCATCNSGAVTVDRDPQCWPDVLQPKRITVHCENNFCPVPITVNDDTESQVLYAHFYFKC
GKHTSLGEEDEAVPLYLIKPNLRKIPCLACTDVRDMVLVFPCEVGHVTCLDCFKDYCSVR
LRERQFQFDDISGYYTLPCPAGCANSFVSEIHHFHLLTPEQYEQYQRFSTEEYVLRAGGL
LCPRPDCGMGIIPESPDDGSDKCRKIQCFGGCGYVFCRRCLQGFHLGECELQPSESSNAL
HKLGYLLDPQKVNDAKWDEASKKTIKISTKPCPKCRTPTERDGGCMHMVCTRAGCGYHWC
WICQTEWTRDCMGNHWFG
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcttttttggctttatacgaaatgtatttcttaagatgttacaattaatttgg
tttagtaagcgaaaaataacgaattcattaagtatatatgtgaaaactaatacgggaaat
acatttgctgttgatttggatccaaaatgggatataaaaaatgtaaaagagatagtagct
tctcaaatgggaacatcacctgaagatataaaaataatatttgcaggaaaagaactacat
aattcaacgataatagaagaatgtgatttgggacaacaaagtatattgcatgcaattcga
actccatcacaaaggttaaataaaaataaaaataccaatatcattgatgaatctcttgaa
atttctgaattaaatgatagtggtggaaagccaatgaacgaaactcttactgatttacct
ttagatgaatcagatctacaagaaaattcatccatggaagagaaacaagagaatcgagca
catttttttgtattttgtacaacaccatgtaaatctgtgacagttggaaaattaagagta
agatgtgcaacttgtaatagtggagcagttacagtagatagagatcctcaatgctggcca
gatgtattacaaccaaaaagaataacagttcattgtgaaaataatttttgtccagtacct
ataactgttaatgatgatacagaatcacaagttttatatgcacatttctattttaagtgt
gggaaacatactagtttaggagaagaggatgaagcagttcctctttatcttataaaacca
aacttaagaaaaataccttgtcttgcttgtacagatgttagggatatggttttggttttt
ccatgtgaagttggtcatgtgacttgtcttgattgctttaaagattattgttcagttcga
ttaagagaacgtcaattccaatttgatgatattagtggttattatactttaccatgtcca
gcaggatgtgcaaattcttttgtttctgaaatacatcattttcatcttcttactccagaa
cagtatgagcaatatcaaagatttagcacagaagaatatgtgttacgtgctggtggactt
ttatgtccaagaccagattgtggtatgggtatcataccagagtctccagatgatggtagt
gataaatgcagaaaaattcaatgttttggtggttgtgggtatgttttttgtagacgatgt
ttacaaggcttccatttaggagaatgtgaattgcaaccatcagaatcatcaaatgccttg
cataaattgggatatttacttgatccacaaaaagtcaatgatgcaaaatgggatgaagct
agtaaaaaaactattaaaatctcaacaaaaccatgtccaaaatgtagaacaccaactgaa
agagatggaggatgcatgcatatggtttgcactagagcaggatgtggttatcattggtgt
tggatatgtcaaacagaatggacaagagattgtatgggtaatcattggtttggataa
DBGET
integrated database retrieval system
