Apis laboriosa (Himalayan honeybee): 122717317
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Entry
122717317 CDS
T07817
Name
(RefSeq) probable ATP-dependent RNA helicase kurz isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
alab
Apis laboriosa (Himalayan honeybee)
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alab03009
]
122717317
Enzymes [BR:
alab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122717317
Ribosome biogenesis [BR:
alab03009
]
Eukaryotic type
90S particles
Helicases
122717317
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
nSTAND_NTPase5
Flavi_DEAD
WHD_HA2
DUF2857
NAT10_TcmA_helicase
AAA_30
AAA_25
AAA_16
Motif
Other DBs
NCBI-GeneID:
122717317
NCBI-ProteinID:
XP_043797209
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MGKKKYNWKARNNIEVIIDNSVTKKIPIDIIHREDNFDSCNALVLPNEKRKTKKKIKNTV
ITRLLSKKRRKQLEKVIEKKKKKLQRTELLKELVEVQASPEELKQYVSLTSVQTKGLKRH
FREAELSVKEYKIDSNIKNKNDTIEMPINAIRASKKKRLAILEKEVIEKTISDLNVIGFD
ESSNSELESDTKNNEDEQKEDATNIVSLEKNKIKEKNEHISNKKNDLIDGNVTKNTIEEE
KKSIVTLTKKSLKPQQLIEKKSALFVMLQRKPEIQAARLKLPIVAEEQIIMEVINENPVV
IITGETGSGKTTQVPQFLYEAGYAQEKLIGITEPRRVAAISMSKRVAQEMNLSEKEVSYL
IRFEGNVTPETKIKFMTDGVLLKEIQNDFLLTKYSIIILDEAHERSVYTDILIGLLSRIV
PLRNKRKNSLKLVIMSATLRVEEFVENNKLFKMKPPVLTVESRQFPVTIHFNKTTSINYI
SDALKKAIKIHTRLPDGGILIFLTGQREVNFVVRKLRQAFSTRNKKEITKKIEKSENKDF
SKKKEDIQDKNDNNKNDNIDSDNDFCYKKAIRYNKLRQKKHIQLPNINLDDYSVIPIDDT
YEDLIAAEDDEEEQLDESEDEDMINPKICINAQPLWVLPLYSLLPSHKQARVFEPPPEGH
RLCVVSTNVAETSLTIPNIKYVIDCGRCKIKMYDKVTGVNTYKVYYTSKASANQRAGRAG
RTGPGHCYRLYSSAMFNDHFEQFSQSEIQRKPVDDLILQMKIMNIDKVVNFPFPTPPDAT
QLKMAEKRLIILGILEQPAIEKKDLYSAKVTSLGRSIAAFPVAPRYGKMLALSHQHNLLQ
YTVCMVAALSVQEIFMETFDIDVDSRNKWLQIKRFWAGTGNSLLLGDLMVLIRAVGSAEY
AGTKGKLFSFCEEHGLRHKAIVEIRKLRQQLTNEINLNIQDLNLIIDPQMKPPVDMEAKL
LRQIVLAGMADQVAKKVMPDEINEDQDKTKWKYAYKTVDMEDPVFLHSSCVLRKICPEWV
VYQEIYETNKMYMRGVTAIESEWLPKFAPSLCQLGDPLTNPPPRYDPETGKIMCSITGTF
GRAGWKLPIMNMEYPLSIDGVKWFACFFLEGKVFPKLKQFVSSLLSTPQSITKAWAKLIP
RTQEMTQLLLSHGIMSKVQLLETWKADRNFLLSAYQKWLPESMHGHIMIIWPPI
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaaaaaatataattggaaagcaagaaataatatagaagttataattgataat
tctgtgactaaaaagattcccatagatattatacatcgtgaagataattttgatagttgt
aatgcattagttctcccaaatgaaaagaggaagactaaaaagaaaattaaaaatactgtt
attactcgattattatctaaaaaacgtagaaaacaattagaaaaagttatagaaaagaag
aaaaagaaattacaaagaacagaacttctaaaagaattagtagaagtacaagcatcacca
gaagaactaaaacaatatgtatctttgacaagtgtacaaactaaaggattaaaacgtcat
tttagagaagcagaattatctgttaaagaatataaaattgattcgaatattaaaaataaa
aatgatacaatagaaatgcctataaatgctattagagctagcaagaaaaaaagattagct
attttagaaaaagaagtaattgaaaaaacaatttcagatctaaatgttattggatttgat
gaatctagtaatagcgaattagaatcagatacaaaaaataatgaagatgagcaaaaagaa
gatgcaacaaatattgtgtctttagaaaaaaataaaataaaggaaaaaaatgagcatatt
tcaaataaaaaaaatgatctcatagacggaaatgtaacaaaaaatactatagaagaagaa
aaaaaatcaatagtcactttaactaaaaaatccttaaagccacaacaactgatagaaaaa
aagtctgctctgtttgtaatgctgcaaaggaaaccagaaattcaagcagctagattaaaa
ttaccaatagtagcagaagaacaaattataatggaagtaattaatgaaaatcctgttgta
ataatcacaggtgaaacaggcagtggtaaaactacgcaagttccacaatttctctatgaa
gctggctatgctcaagaaaagttaattggaattacagaaccaagaagagtagcagctata
tctatgagtaaacgtgttgctcaagaaatgaatcttagtgaaaaagaagtttcttacttg
attcgttttgaaggaaatgttacacctgaaacaaaaatcaagtttatgactgatggtgta
ttattaaaggaaatacaaaatgattttttactgacgaaatattcgataattattctagat
gaagcacatgaacgtagtgtatatactgatattttgataggattgttatcacgaattgta
ccactacggaataaaagaaaaaattctttgaaacttgtaattatgtcagctacattacgt
gtagaagaatttgtagaaaataacaaattatttaaaatgaaaccacccgtattaacagtg
gaatcaagacaatttcctgttacaatacattttaataaaacgacaagcattaattatatt
tctgatgctttaaaaaaagctataaaaatacatactcgacttcctgatggtggaatttta
atatttttgacgggacaacgagaggtaaatttcgtagtacgaaaattgcgtcaagctttt
tctacaagaaataagaaagaaattacaaaaaagatagaaaaatcagaaaataaagatttt
tcaaaaaagaaagaagatattcaagacaaaaatgataataataaaaacgataatattgat
agtgataatgatttttgttacaaaaaagctattcgttataacaaattacgtcaaaaaaaa
cacattcaactaccaaacattaatctggatgattattctgtaattcctattgatgataca
tacgaagatttaattgctgcagaagatgatgaagaagaacaattagacgaaagtgaagat
gaagatatgattaatccaaagatttgcataaatgcacaaccattatgggttttaccattg
tattctttgcttccaagtcataaacaagcaagagtatttgagccacctccagaaggtcat
cgtttatgtgtggtatccacaaatgtagcagaaacttccttaactatacctaatataaaa
tatgtaatagattgtggacgttgtaaaataaagatgtatgataaagtaactggtgttaat
acatataaagtctactataccagtaaggcatctgctaatcaacgggcaggaagagctggt
agaactggtcctggacattgttataggttatattcttcagcaatgtttaatgatcatttt
gaacagtttagccaatcagagattcaaagaaaacctgtagatgatttaattttacaaatg
aaaatcatgaatattgataaggttgtgaattttccttttccaacgccaccagatgctaca
caattaaaaatggctgaaaaaagactaataatacttggaattttagaacagccagctatt
gaaaaaaaagatttatatagtgctaaagtaacatcacttggtcgcagtatagctgcattt
cctgttgctcctcgttacggaaagatgttagctttgtcccatcaacataatcttcttcaa
tacacagtgtgtatggtggctgcgctttctgttcaagagatatttatggaaacatttgat
atagatgttgattctcggaataaatggttacaaataaaacgtttttgggctggtaccggc
aatagtttacttcttggtgatctgatggttttaatcagagctgtaggaagtgcagaatat
gcaggaactaaaggaaaattattttctttttgtgaagagcatggtttacgacataaggcg
attgtggaaattcgaaaactccgacagcaactaacaaatgaaattaatttgaatattcaa
gatttaaatctcatcattgatccacagatgaaacctccagttgatatggaagccaaactt
ctcaggcaaatagttctcgcaggaatggctgatcaagtggcaaaaaaagtgatgccagat
gagattaatgaagatcaagataaaactaaatggaaatatgcctataaaactgtagatatg
gaagacccagtatttctacattcctcatgtgttcttcgaaaaatatgtcctgagtgggta
gtttatcaagaaatatatgaaacaaataaaatgtatatgcgtggtgtcacagctatagaa
tcagaatggcttcctaaatttgctccttctctatgtcagcttggagatcctttgactaat
ccaccaccaaggtatgatccagaaactggaaaaataatgtgtagtataacaggaacattc
ggaagagcaggttggaaattaccaataatgaatatggaatatccattatccatagatggg
gttaaatggtttgcatgcttttttttagaaggaaaagtatttccaaaattaaaacaattc
gtttcttcattattatcaactcctcaaagcattaccaaagcatgggctaaattaattccg
cgaacacaagaaatgacacaactattattatctcatggaattatgtcaaaagtacaatta
ttagaaacttggaaggcagatagaaattttcttttatcagcttatcaaaaatggttgcca
gaatcaatgcatggacatatcatgatcatttggccacctatatga
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