Apis laboriosa (Himalayan honeybee): 122717891
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Entry
122717891 CDS
T07817
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
alab
Apis laboriosa (Himalayan honeybee)
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alab03021
]
122717891
03036 Chromosome and associated proteins [BR:
alab03036
]
122717891
Transcription machinery [BR:
alab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122717891
Chromosome and associated proteins [BR:
alab03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
122717891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_3
HHH_9
Tex_YqgF
Spt6_S1
HTH_10
S1_RRP5
Tex_N
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
122717891
NCBI-ProteinID:
XP_043798317
LinkDB
All DBs
Position
Unknown
AA seq
1769 aa
AA seq
DB search
MADFLDSEAEESEEEEELDDNEKKKLKKIKAVAESDEEEEEDDEDRLREELKDLIDDNPI
EESEGEDSDASGASKKRKKSDDEDFDDRLEDEDYDLIEENLGVKVERKRFKRLRRIQDEE
SEEEQEKEVDDDRDAIANELFEGSGDEREITMEDERRSERSHRPEVDTFDEEGSEGEYTD
ADDFIVDDDGRPIAEKRKKKKPIFSDAALQEAQDIFGVDFDYDEFGKYGEEDYEEDEEEE
EEEEDEYMDDEDTERPRRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEIRNTDIPE
RMQLRTIPVTPVAEGSDELDLEAEWIYKQAFCRPTISIQDAHLNAEAKERARKGPQTIGK
IKKALDFMRNQQFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKENLLKLFD
KMRNYQLDEIMKNPDAPLSDNIRLIKDDDIERLKNVQTSEELNDVYYHFMLYYSHEIPTM
QETARQKEKKARKEAKIQKRKQQIAGAEENGEDPPEEEVDVEEEEEADETLKQAVRTGPY
SICRRAGLDSLAKKFGLTPEHFAENLRDNYQRHEVDQEPTEPLIIANEYCSQILNNPEEV
LKAVQLMVAIQLAREPLVKRCVREMYMERAKISVKPTKKGIKEIDENHPIYGMKYLKNKP
VRDLIGDQFLNLIIAEEDKLITITLSDSIEGNTSNNYVDEMKQLYYRDEFSKNVQDWNAL
RIGSVEIALTRIVLPSLKKELRANLIAEAKECVMRACCRKMYNWIKVAPYICEFPEEEDE
EWDTTKGLRVMGLAYVPDYSQAAFACLIAPDGECTDYLRLPHLMKRKNSYREDEKTMKEA
DLLAIRNFIATKKPHVVVIGGESREAMMIAADIKECIANLVEEEQFPNIKIEICDNELAK
IYSNSNKGISEFRDYPELLRQAISLGRRMQDPLVEFSQLCTADEEILCLKYHILQDQLPK
DELLDNLYLEFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQRL
ENRTQLVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAV
DALEYDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNCR
YKDLRVPYQSPSAERLFDILTKETPETFYVGKLVLATVIGISHRKPQGDQLDQANPVRND
ETGLWQCPFCLKNDFPELSEVWNHFDAGACPGKATGIRLRLDNGISGYIHIKNLSDRHVA
NPEERVSIGQIIHCRIIKIEVERFSVECTSKSSDLADKNHEWRPQRDPFYDTETEQRDAK
VEEDAKKAKQRQTYVKRVIVHPSFHNISFAEAEKLMQTMKQGEAIVRPSSKGADHLTVTW
KVTDEVYQHIDVREEGKENAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYASELLDFKY
YKATVEGIKDKAEDILKEQKKENPGGIPYIISAAKNYPGKFLLSYLPRTRCRHEYVTVSP
EGFRFRGQMFGRVNDLFRWFKEHFRDPVPGQSTPSTPRGAMTSRTPYHTTPGTVSGMNQE
AIQRVAQNLPHHMLHSLSQVANQTPHHYPPHTPGTTNAAGYAGVHTYPNTPYTPSGQTPF
MTPYQTPHHTPHHHGQPTPRYGQQTPNHQQGPFIHPPPPSGISGHHRSTPSHRPTPPMST
PGDPMDWKKAAEAWARLKSGPRVSTSTPRYEESRKTPRNYEESVGRTTPRNRTSNRTPSY
KSPRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttttagattcagaagcagaagaaagcgaggaggaagaggaattagacgat
aatgaaaagaaaaaattgaagaaaataaaagctgtggcagaaagtgatgaagaagaggag
gaagatgatgaagatcgattacgtgaagaacttaaagatctcattgatgataatcccata
gaagaaagtgaaggagaagatagtgatgcttctggagcatccaaaaaacgtaaaaagagt
gacgatgaagatttcgatgatcgtttagaagatgaagattatgatttgatagaagaaaat
ttgggagttaaagttgaaagaaaacgtttcaaacgccttcgtaggattcaagatgaagaa
tcagaggaagaacaagaaaaggaagtggatgatgatagagatgctattgcaaatgaactt
tttgaaggctctggtgatgaaagggagattactatggaagatgagaggagaagtgaacgc
agtcacagacctgaagtggatacatttgatgaagaaggaagcgaaggagaatatactgat
gcggatgattttattgttgacgacgacggtaggccaattgcagaaaaacgaaagaagaaa
aaaccaatattttctgatgcagccttgcaagaagcacaagatatttttggtgttgatttt
gattatgatgaatttggtaaatatggtgaagaagactatgaggaagatgaagaagaagaa
gaagaagaggaagatgaatatatggatgatgaagataccgaaagaccacgaagaccgaaa
aaacaactgaaaaagaaaacaacgagaaaaagtatatttgagatttacgaaccaagcgaa
cttaaacgtggtcattttaccgatatggataatgaaatacgaaatacagatataccggaa
agaatgcaacttcgtactattcctgttactccagttgcagaaggttctgatgagttagat
ctagaggcagaatggatttataaacaagctttttgtcgaccaactatttcaattcaagat
gcacatttaaatgctgaagctaaagaaagagctcgaaaggggcctcaaacgatcggtaaa
attaaaaaagctttggattttatgcgaaatcaacaatttgaggtgccttttatatcattt
tatagaaaggaatatgttttaccggaattaaacattaacgatctttggaaagtatataag
tttgatgcgaaatggtgtcaacttcgtcaaagaaaagaaaacttattaaaattattcgat
aaaatgagaaattatcaattagacgaaattatgaaaaatcctgatgctcctttatcagat
aacatacgattgattaaagatgatgatatagaacgattaaaaaacgtacaaactagcgaa
gaattaaacgatgtttattatcacttcatgttatattatagtcacgaaattccaacgatg
caagaaactgcccgtcagaaagaaaaaaaagcacgcaaggaagctaaaattcaaaaacga
aaacagcaaattgctggtgccgaagaaaatggagaagatcctccagaagaagaagtagat
gtagaagaagaagaggaagcggatgaaacattgaaacaagctgttcgaacaggtccgtat
tctatttgtaggcgagctggccttgatagtcttgcaaaaaaatttggtcttactcccgaa
cattttgctgaaaatttgcgagataattatcaacgacatgaagtggatcaagaaccaact
gaaccattaatcattgctaatgaatactgtagtcaaatacttaacaatccagaagaagta
ttaaaagccgtacaattaatggtagctattcaattagcgcgcgaacctttggtaaaaaga
tgcgtccgagaaatgtatatggaaagagcaaaaatatcagtaaaacctacgaaaaaagga
attaaagagatagatgaaaaccatccaatttacggtatgaaatatttgaagaataaaccg
gtgcgagatttaatcggagatcagtttttaaatttaatcatagctgaagaagataaatta
atcacgataactttaagcgatagcatcgaaggaaatactagtaacaattacgttgatgaa
atgaaacagctttattatcgagatgaattcagtaaaaatgttcaagattggaatgcattg
agaattggaagtgttgaaatagcacttacacgtatagttctaccgagtttgaaaaaagag
ttaagagcaaatcttattgcggaagctaaagaatgcgtaatgagagcatgttgtcgtaaa
atgtacaattggatcaaagttgcgccttatatctgtgaatttccagaagaagaagatgag
gaatgggatactacaaaaggacttcgagttatgggtttagcttatgttccagattattct
caagccgcgtttgcttgtttaattgctcctgatggagaatgcacagattatttaagatta
ccacacttgatgaaacggaagaatagttatcgagaagatgaaaaaaccatgaaggaagct
gacttgttagcaatcagaaattttatagcgacaaaaaaaccgcatgttgtagtaataggc
ggtgaatcgagagaagcaatgatgatcgctgctgacattaaggaatgcattgcaaatcta
gtagaagaagaacaatttccaaatattaagatagaaatttgtgacaatgaattagctaaa
atctactcaaacagtaataaaggtatatccgaatttcgggattacccagaattattgcga
caagctatttcattgggtagaagaatgcaggatcctttggtagaattttctcaattatgc
actgctgatgaagaaattttatgtttaaaatatcacattttacaagatcaattaccaaaa
gatgaacttttagataacttatatttagaatttgtgaatcgcgtaaacgaagtcggtgtt
gatgtaaataaggccgtacaacaagcttattgcggaaatttagttcaattcgtgtgcggt
ttggggccaagaaaaggacaggcattgatcaaaatgttaaagcaaaccaatcagagatta
gaaaatagaacgcaattggtaactgcttgtcacatgggacctaaagtttttattaattgt
gcgggttttattaaaatagatacgaacagtttaggagacagcactgaagcttatgtagaa
gttcttgatggatctcgcgtacatcccgaaacatatgaatgggcaagaaaaatggcagtc
gatgctttggaatacgatgacgaagatgctaatcctgctggagcactcgaagaaattctc
gaatctcctgagagattgaaagatcttgatctggatgcttttgcggaagaactcgagaga
caaggtttcggcaataaatgcgttacactatacgatatcagagcagaattaaattgcaga
tataaagatttacgtgtaccatatcaatcgccaagcgcagaacgattatttgatattcta
acgaaagaaaccccagaaacattttatgtaggaaaattagtattggctacggtgatagga
ataagtcatagaaaaccacagggtgatcaattagatcaagctaatcctgtaagaaatgat
gaaactggattatggcaatgtccattttgtttgaaaaatgattttcctgaactatctgaa
gtatggaatcattttgatgccggagcttgtcctggcaaagctactggaattagattaaga
ttagataatggaatatctggttatattcatataaaaaatttatctgacagacatgttgcg
aatccggaagaaagagtaagcataggacaaataatacattgtcgaataataaagattgaa
gtggagcgatttagcgtcgaatgtacgagtaaaagcagtgatctcgcggataaaaatcat
gaatggagaccacaaagagatccattttacgacaccgaaacagaacaaagagatgcaaaa
gttgaagaagatgcaaaaaaagcgaagcaacgtcagacatatgtaaaacgcgtaatcgtg
catccttcttttcataatattagttttgcagaagctgaaaaattaatgcaaacaatgaaa
caaggagaagctatagttagaccaagcagcaagggtgccgatcacttaacagtcacatgg
aaagttacggatgaagtatatcaacatattgatgtgagagaggaaggaaaagaaaatgcc
ttttctcttggtcaaagtctatggattggaaatgaagaattcgaagatttagatgaaatt
attgcaagacatgtaaatcctatggctgcatatgcttcagaattattggattttaaatat
tataaagcaactgtagaaggtattaaagataaagcagaagatatactaaaagaacagaaa
aaagagaatcctgggggaattccatacataatatctgctgcaaagaattatcctggaaaa
tttttattatcttaccttccacgaactcgatgtcgtcacgaatatgtgacggtatcacca
gaaggatttagattcagaggacaaatgtttggtagagtaaacgatttgtttcgatggttc
aaggaacattttcgagatccagtacctggacaatctacacctagtactccacgtggtgca
atgacatctagaacaccttatcatacaacaccaggaacagtgagtggaatgaatcaagaa
gctatacaaagagtggctcaaaatcttcctcatcatatgttacattctttatcacaagtt
gcaaatcaaactccacatcattatccaccgcacacgccaggaactacaaatgccgctggt
tatgctggagttcatacttatcctaatacaccatatacaccttctggacaaacgcctttt
atgacaccatatcaaacaccacatcatactccacatcatcacggtcaaccaactccaaga
tacggacaacaaacacccaatcatcaacaaggtccttttattcatccacctccaccttcg
gggataagtggacatcacagatcaaccccatcgcatagacctacgccacctatgtcaaca
cctggcgaccctatggactggaaaaaagcagcagaagcatgggcacgattaaaaagcggt
ccacgtgtatctacttctactccaagatacgaagaatctagaaaaactcctagaaattat
gaagagtcggttggaagaacaactccacgaaatagaacttcgaatcggacaccttcgtat
aaatctcctcgaggtactcctcataccaattctagtcctcgaagtatgtctcttagcgga
gatggtactcctttatatgatgaaagttaa
DBGET
integrated database retrieval system
