Apis laboriosa (Himalayan honeybee): 122718316
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Entry
122718316 CDS
T07817
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
alab
Apis laboriosa (Himalayan honeybee)
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alab03021
]
122718316
03036 Chromosome and associated proteins [BR:
alab03036
]
122718316
Transcription machinery [BR:
alab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122718316
Chromosome and associated proteins [BR:
alab03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
122718316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_3
HHH_9
S1_RRP5
Spt6_S1
Tex_central_region
Tex_YqgF
OB_RRP5_4th
Tex_N
V-SNARE
Motif
Other DBs
NCBI-GeneID:
122718316
NCBI-ProteinID:
XP_043799174
LinkDB
All DBs
Position
Unknown
AA seq
1743 aa
AA seq
DB search
MADYLDAEAEESEEEEELDVNERKKLKKLKAMQDSDDEDDDEEDEGEVPGLIDDNPIEDD
DNDGEDSDGSDYSRKRKKSDDEDFDDRLEDEDYDLLEENLGVKVERKRRFKRLRRIQDEE
SEGEEEREVDDERDAIANELFQGSGEEDEERSEVSHRGEVEGFDEEESEDEDDFIVDGDG
VPIAEKRKKKKPIFSDAALQEAQDIFGIDFDYDEFGKYGEDEFEDDEDEEEDDYIHDEIE
DRPRRSKQHLKKKSTKKSIFEVYEPSELIRGHFTDIDNEIRTTDIPERMQLRAVPITSTV
EGSDELDLEAEWIYKQAFCQPTISIQDAHLNEEAKERARKGPQTVNKIKKALDFMRNQNF
EVPFISFYRKEYVLPELNINDLWKIYKFDMKWCQLKQRKENLLKLFEKMRNFQLDEIMKN
PDAPLSDNIRIIKDDDIERLKNVQTFEELNDIYRHFMLYYNEDVSVMQEDVRKKEKEAQK
KAKLEKRKQQIEEAEENGEDLPEEIADIDDEEEEIDESLKKPIRKGPYYICKKAGLDGLA
KRFGLSPEHFAENLRDNYQRHEVDQDPTEPAIVANDFCSAIFNTNEEVLKAAQLMVAIQL
AHEPLVRKCVREMYMERAKLSIKPTKKGIKEIDEAHAIYGLKYLKNKPVRDLVGDQFLKL
IIAEEDKLVTFSFSDIIEGNTSNNYIDEIKQLYYRDEFSKSVQDWNTLRTGSVEIALNRI
IIPQLKKELRSNLLIEAKECVMKACCRKMYNWIKIAPYTCEFPEEDDEEWNTSKGIRVMG
VAYVPDPSQAAFTCIISPDGECTDYLRLPHILKRKNSFRDNEKVLKEADLLAIKNFIATK
KPHVVVISGETREALMIVADIKECISNLIEEEQYPSIQVEICDNELAKVYANSNRSISEF
RDYPELLRQAISLARRIQDPLLEFSQLCTIDEEILCLKYHSLQDQLSKEDLIENLYLEFI
NRINEVGVDLNRAVQQPYTANLVQFVCGLGPRKGQALIKILKQTNQRLENRTQLITACHM
GPKVFVNCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDEDANP
AGALEEILESPERLKDLDLDAFAEELERQGFGNKCITLYDIRAELNCRYKDLRISYQSPN
TEKLFDILTKETPETFYVGKLVLATVVGISHRKPQGEQLDQANPVRNDETGLWQCPFCLK
NDFPELSEVWNHFDAGACPGKATGIRLRLDNGISGYIHVKNLSDKHVANPEERVRVGQVI
HCRIIKIEVERFSVECTSKTSDLVDKNHEWRPQRDVYYDTEAEDKDIKTEEDIKKVQQRQ
TYVKRVIIHPNFYNIGFAEVEKLMQTMKQGEAIIRPSSKGADHLTVTWKVTDNIYQHIDI
REEGKENTFSLGRSLWIGNEEFEDLDEIIARHINPMSAYVSELIDFKYYKSNIEGIKDKA
EEILKEQKKQNPGGIPYIVSAAKNYPGKFLLSYLPRTRCRHEYITVSPDGFRFRGQMFSR
LSDLFRWFKEHFRDPIPGQSTPGTPHGAMTSRTPYNGTTPGVNGVNPDAIQRVAQNMPHH
MLHSLSKVANHTPHHYPPYTPGAASVSNYGVYGSTPYTPSGQTPFMTPYHTPHHTPHHPQ
TPSHAQGPFLQPIPSAMNSNSHRTARSHRSVSNSSNATNWSKAAEAWARSKQSTSKEFNT
PKYDESRKTSRNQEIQNERATPRHRTPSVRTPSYKSPRGTPFTNSSPRSMSLSGDGTPLY
DES
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagatgctgaagcagaagaaagtgaggaggaggaggaactcgatgtt
aatgaaagaaaaaaacttaaaaaattaaaagctatgcaagatagtgatgatgaagatgac
gatgaagaagatgaaggagaagttccaggacttattgatgataatccaattgaagatgat
gataatgatggtgaagatagtgatggatctgattattctagaaaacgtaaaaaaagtgat
gatgaagattttgatgatcgtttagaagatgaagattatgatctacttgaggaaaattta
ggagttaaagttgaaaggaaacgtcgttttaaacgtttgcgaagaatacaagatgaagaa
tcagagggagaagaagaaagagaagtagatgatgaaagagatgccattgcaaatgaatta
tttcaaggctctggagaggaagatgaagaaagaagtgaagttagtcacagaggtgaagtg
gaaggatttgatgaggaagaaagtgaagatgaggatgatttcattgtggatggtgatgga
gtacctatagctgagaaaagaaagaagaaaaaacctattttttctgatgctgctttacaa
gaagctcaagatatttttggtatagattttgattatgatgaatttggaaaatatggagaa
gatgaatttgaagatgatgaagatgaagaagaagatgattatattcatgacgagatagaa
gatcgaccaagacggtcaaaacaacatcttaaaaaaaagagcacaaaaaaaagtatcttt
gaggtatatgaacctagcgaacttatacgtggtcattttactgatatagacaatgagatt
cgtacaacagacattcctgaacgtatgcaacttcgcgctgttcctattacatcaactgta
gaaggttcagatgaattagatcttgaagcagaatggatatacaaacaggcattctgtcaa
ccgacgatttcaatacaagatgctcatcttaatgaagaagccaaagaaagagctagaaaa
ggtcctcaaacagttaacaaaattaaaaaagctttagatttcatgcgtaatcaaaacttt
gaagttccatttatatcattttatagaaaagaatatgttttaccagagttaaatattaat
gatttgtggaaaatttataagtttgatatgaaatggtgtcaacttaaacaaaggaaggaa
aatttattgaaattgtttgaaaaaatgagaaattttcaattagatgagattatgaaaaat
ccagatgctccgttatctgataacatacgaattattaaagatgatgatattgaacgactt
aaaaatgttcagacttttgaagaactgaatgatatttatcgacattttatgttatattat
aatgaggatgtatcagttatgcaagaagatgtacgcaaaaaagagaaagaagcacaaaaa
aaagctaaattggagaaaagaaaacaacaaatcgaggaagctgaggaaaatggagaagat
cttcctgaagaaattgcagatatagatgatgaagaagaagaaatagacgaatcattaaaa
aagccaattaggaaaggtccttattatatttgtaaaaaggctggtttagatggacttgct
aaaagatttggtctctctccagaacattttgctgaaaatcttcgagataattatcaacgc
catgaagtagatcaagatccaacagaacctgcaatagtagcaaatgatttttgttcagca
atttttaatacaaatgaagaagtacttaaagctgcacaattaatggttgcaattcaatta
gcgcatgaaccattagtacgcaaatgtgttagagaaatgtatatggagagagcaaaatta
tctataaaaccaactaaaaaaggaataaaagagatagatgaggctcatgccatttatgga
ttaaaatatcttaaaaataagcctgtacgagatcttgttggtgatcaatttttaaaacta
attatagcagaagaagataaattagttacattttcctttagtgatataattgaaggaaat
actagcaataattatattgatgaaataaagcaactatattatagagatgaatttagtaaa
agtgtacaggattggaatacattaagaactggtagtgttgaaatagctttaaatcgtatt
ataataccgcaattgaaaaaagaattacgatctaatcttttaatagaggcaaaagaatgc
gttatgaaagcttgttgccgtaaaatgtacaattggataaaaattgctccatatacttgt
gaatttcctgaggaagatgatgaagaatggaatactagtaaaggaattcgtgtgatgggt
gtagcttatgtgcctgatccatctcaagctgcttttacttgcataatttctccagatgga
gaatgcactgattatttaagattaccacatatattaaaacgtaaaaatagttttagggat
aacgaaaaagtgttgaaagaagctgatttattagcaattaaaaattttattgccacaaaa
aaaccacatgttgtagtaataagtggtgaaactagagaagcattaatgatagtagctgat
ataaaagaatgtatatctaatctcatagaggaagaacaatatccttcaattcaagtggaa
atatgtgataatgaacttgctaaagtttatgcaaatagtaatagaagtatatctgaattt
agagattatccagaactattaagacaagctatatctttagcaagaagaatacaagatcct
ttgttagagttctctcaattatgtacaattgatgaagaaattctgtgccttaaatatcat
tctttgcaagatcaactttctaaagaggatcttatagaaaatttatatttagaatttata
aatcgtataaatgaagtaggagtagatttaaatagagcagttcaacagccttatacagca
aatttagtacaatttgtatgtggtttaggacccagaaaaggacaagctctgattaagatt
ttaaagcaaactaatcaaagattagaaaatagaacacaacttataacagcatgtcatatg
ggacctaaagtatttgtcaactgtgctggttttattaaaattgatacaaatagtttagga
gacagtacagaggcatatgtagaagttttagatggttcgcgtgtacatccagagacatat
gaatgggctagaaaaatggcagtagatgctttagaatatgatgatgaagatgcaaatcct
gcaggagctttagaagaaattcttgaatcaccagaaagattaaaagatttagatttagat
gcatttgcagaagaacttgaaagacaaggttttggaaataagtgcattactctttatgat
ataagagctgaacttaattgtagatacaaagatcttcgtatatcatatcaatctccaaat
actgaaaaattattcgatattttgactaaagaaactccagaaactttttatgttggtaaa
ttagttttggctacagttgttggtataagtcatagaaaaccacaaggagaacaattagat
caagcaaatcctgttcgaaatgacgaaaccggattgtggcaatgtccattttgtttaaaa
aatgattttccagaattgtctgaagtatggaatcattttgatgccggtgcatgtccaggg
aaagcaactggaattcgtttaagattagataatggaatatctggttatattcatgtaaaa
aatttatctgacaaacatgtcgctaatccagaagaaagagtacgtgttggacaagtaatt
cattgtcgtataataaagatcgaagtagaacgatttagcgttgaatgtactagtaaaacc
agcgatcttgttgataaaaatcatgaatggagaccacagcgagacgtttattatgacaca
gaagcagaagacaaagatataaaaactgaagaggatattaagaaagtgcaacaaagacaa
acttatgtaaaaagagttataattcatcccaatttttataatattggttttgcagaagtt
gaaaaattaatgcaaactatgaaacaaggagaagcaataatacgacctagtagtaaagga
gctgatcatttgactgtaacatggaaagttacagacaatatttatcaacatatcgatata
agagaagaaggaaaagaaaatacattctctttgggtcgcagtttgtggattggcaatgaa
gaatttgaagatttagatgaaattattgcaagacatattaatccaatgtctgcttatgtt
tcggaactaatagattttaaatattataaatcaaatatagagggtattaaagataaagca
gaagaaattttaaaggaacagaaaaagcaaaatcctggtggaataccatatattgtatct
gccgctaaaaattatcctggaaaatttttactttcatatttaccacgaactcgttgtcgt
catgaatatatcaccgtgtcacctgatggatttcgatttagaggtcaaatgttcagtaga
ttaagcgatttattccgttggtttaaggaacattttagagatcctataccaggtcaaagt
acacctggtactccacatggagctatgacttccagaacaccatataatggtactactcct
ggagtaaatggagtgaatccagatgcaatacagagagtagcacaaaatatgccacatcat
atgctacattctctctcaaaagtagcaaatcatactccacatcattatccaccatatact
ccaggtgctgctagtgtcagtaattatggcgtttatggaagtacaccatatacaccttcc
ggccaaactccgtttatgactccatatcatacaccacatcatacacctcatcatccacaa
acacctagccatgctcaaggaccattcttacaaccaattccttctgcaatgaactcaaat
tcacatagaactgcaagatcacacaggtctgtttctaattcttctaatgcaacgaattgg
tcaaaagccgcggaagcatgggctcgatcaaagcaatctacttccaaagaatttaatact
ccaaaatatgacgaatctaggaaaacgtcacgaaatcaagaaattcaaaatgagagggca
actccacgccatagaacaccatctgttcgtactccatcttacaaatctcctagaggaact
ccatttacaaattctagtcctcggagtatgtctctaagtggagatggtactcctttatat
gatgaaagttga
DBGET
integrated database retrieval system
