Apis laboriosa (Himalayan honeybee): 122718594
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Entry
122718594 CDS
T07817
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
alab
Apis laboriosa (Himalayan honeybee)
Pathway
alab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122718594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alab03041
]
122718594
03009 Ribosome biogenesis [BR:
alab03009
]
122718594
Enzymes [BR:
alab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122718594
Spliceosome [BR:
alab03041
]
Complex A
U1 snRNP components
U1 related factors
122718594
Complex B
122718594
Ribosome biogenesis [BR:
alab03009
]
Eukaryotic type
Pre-60S particles
Helicases
122718594
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
TFIIA
Motif
Other DBs
NCBI-GeneID:
122718594
NCBI-ProteinID:
XP_043799694
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MYNNSYSNHTSYRPRGSRDSTNRNGGGTYWNRQQQTNKEKSIKKQVQRRTPGDSLKKPSW
DLSKLPVITKNLYIPHINILKRSSDEVNKYHIGKEITVKGNNTPSPIQAFEESNFPDYVM
EEIRKQGFAEPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYILPATVHINHQPRLSRGD
GPIVLILAPTRELAQQIQSVARDFGSSSCIRNTCIFGGSPKGPQARDLERGVEICIATPG
RLIDFLEKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEV
QALAEDFLSDYIQINIGSLTLAANHNIRQIVEICQEHEKEMKLSNLLREIGKDRGSKMII
FVETKKKVDDITKAIKREGWPAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAARGLD
VEDVKYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELISVLEEAGQA
INPQLADLANSIKPAYGKGRQRWSHSRSNKDNSSTGSPRNNSSPISNNWQNQHVQSTQHS
NGSSQERTVVRQQNGYQASRQNSFQSNYQPQQHQQPQQQQHQHQQHQQQQQQQQQQQHQR
QPNTYTNGCQTTNSYSASYQNANIPRYHGRTGGFQGNRYHNRQSAYNTNQTPGGQSVYSM
PPPFMMPSAGGHTADSSMQSLVNNKFFQTNRPPPNTGACAYQSMGYSQFQAVPPYSYPYP
PTPVQQ
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtataacaatagttattccaatcataccagttacagacccaggggaagtagagattct
accaatcgtaatggagggggaacatattggaatagacaacaacagacaaacaaagagaag
tcaattaagaagcaagtccaaagaagaactcctggagattcactgaaaaaacctagctgg
gatctctctaagttaccagtgatcacaaaaaatttatatattccacatatcaatatttta
aaacgatccagtgatgaagttaataaatatcacattggcaaagaaatcactgtgaaagga
aacaatactccttctccaattcaagcatttgaagaaagtaatttcccagattatgtaatg
gaagagataagaaagcagggttttgctgaaccaacagcaatccaagcacagggttggcca
atagcactcagtggtcgtgatttggttggaattgctcaaacaggatctggaaaaacttta
gcttatatattaccagcaactgtacacattaatcatcaaccacgtttgagccgaggagat
ggtcccattgttttgatactcgctccaacaagagaattagcccaacaaattcaatctgtt
gctagagattttggttcttcctcctgtattcgtaatacttgcatctttggtggttctcca
aaagggcctcaagctcgtgatttagaacgcggtgttgaaatatgtattgcaactcctggt
agattaatcgattttctcgagaaaggaactacgaatttacgcagatgtacatacctagtc
ttagatgaggcggacagaatgttagatatgggattcgagcctcaaattcgaaaaatcata
gagcaaattagacctgataggcaagtattgatgtggtctgcaacatggccaaaagaagta
caagctttggctgaagatttcctctcagattatattcaaattaacatcggttctttgaca
ttggccgctaatcacaatattcgtcaaatcgtagagatttgtcaagagcatgaaaaagaa
atgaaactttcaaatcttttgagagagatcggcaaagatcgaggaagcaagatgataatt
ttcgttgaaacgaaaaagaaagtggacgatattaccaaagctattaaacgagaaggttgg
cctgctatctctattcacggtgacaaatcccagcctgagagagattacgtgttatctgag
tttagaaatggaaaaacaatgattcttgttgctaccgatgttgctgctcgtggcttggac
gtagaagatgtgaaatatgtaattaacttcgattatccgaacagttctgaggattatatt
catagaataggaagaactggacgttgccaaagtgcgggtactgcttatgcttattttacg
cctaataatgctagacaagcaaaagaactaatttctgttttggaagaagctggtcaagca
ataaatccacaactggccgatttagcaaattcgataaaacctgcatacggaaagggtcgc
caacgttggagtcattctcgttctaataaagataatagttctactggaagcccaagaaat
aatagtagcccgatttcgaataattggcaaaatcagcacgttcagagtactcagcacagt
aatggtagcagtcaagaaaggactgttgtacgccagcaaaatggatatcaggccagtcga
cagaatagtttccaatctaattatcagccgcaacaacatcaacaaccgcaacagcaacag
catcaacaccaacaacatcaacaacagcagcagcagcagcagcaacaacaacatcaacgg
caaccgaatacttataccaatggctgtcaaactacaaatagctattcagctagttatcaa
aatgcaaatattcctagatatcatggaagaacaggaggttttcaaggaaatcgttatcac
aatcgtcagagtgcttacaacaccaatcagacacctggaggacaaagcgtatattctatg
ccgcctccattcatgatgccatctgctggcggacatacagctgattcctccatgcaaagc
ctcgttaacaacaagtttttccagacgaatcgtccaccaccaaatactggtgcttgcgcg
tatcaatcgatgggatatagtcagttccaagctgtgccaccgtatagttatccttatccg
cctacaccagtgcagcagtga
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