Apis laboriosa (Himalayan honeybee): 122719083
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Entry
122719083 CDS
T07817
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
alab
Apis laboriosa (Himalayan honeybee)
Pathway
alab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122719083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alab03019
]
122719083
Enzymes [BR:
alab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
122719083
Messenger RNA biogenesis [BR:
alab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122719083
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122719083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
122719083
NCBI-ProteinID:
XP_043800558
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MCYNVLCDKYATRQMYGYCPSWALDWEYRKKGILDEIRHYAADIISLQEVETDQFYNFFL
PELKHDGYDGIFSPKSRAKTMAENDRKYVDGCAIFYRTAKFTLIKEHLVEFNQLAMANAE
GSDNMLNRVMPKDNIGLAALLRTKEAAWDNGLPSDPAQVQQPILVCTAHIHWDPEFCDVK
LIQTMMLSNELRSILDQAGQSFRPGHKPDSSNVQLLLCGDFNSLPDSGVIEFLTSGRVAA
DHRDFKDLAYKSCLQKISGCDKPNEFTHSFKLASAYSEDIMPYTNYTFEFKGIIDYIFYS
KQSMVPLGLLGPLSADWFKEHKVVGCPHPHVPSDHFPLLVELEMTPTVGTSNGLISRR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtgttataatgtactgtgtgacaaatacgcgacaagacagatgtacggttattgtcca
agttgggcgctcgattgggaatatcgaaagaaaggaatccttgacgaaatacgacattat
gccgcggacataatcagcttgcaggaggtcgagacggaccaattctataattttttcctg
ccagagcttaaacatgatggttatgatgggatcttttctccaaaatctcgagcgaaaaca
atggcggaaaatgatcgtaaatacgttgacggctgcgctatattttataggacagctaaa
tttacactaataaaagagcatttagttgaatttaatcaattggcaatggcgaatgcggaa
ggttctgacaatatgttgaatcgagtcatgccaaaagataatattggattggctgccttg
cttaggaccaaggaggctgcttgggataacggccttccatctgatccagcacaagttcaa
caaccaattttagtttgcacagcacacatccattgggatccagaattttgtgacgttaaa
ttaatacaaacaatgatgctcagtaatgaattacgttccattttggaccaagctggccag
tctttcagacctggtcacaagcctgattcttccaatgttcaattattactttgtggtgat
ttcaattccttacctgattctggtgtaattgaatttcttacttcgggacgagtagcggct
gatcaccgtgattttaaagacttagcttacaaatcatgcttacaaaagatctctggttgc
gataaacctaatgaatttactcattcttttaaacttgcatctgcatatagtgaagatatt
atgccctatactaattatacattcgaattcaaaggtataatagattacattttctattcg
aaacaaagcatggtaccattaggacttttaggtcctttaagtgcagattggtttaaagaa
cataaagtagttggttgtccacatccacatgttccatctgatcactttcctttattagtg
gaactcgaaatgacaccaacagtaggaacaagcaatggattgatttcacgcaggtag
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