Apis laboriosa (Himalayan honeybee): 122720022
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Entry
122720022 CDS
T07817
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
alab
Apis laboriosa (Himalayan honeybee)
Pathway
alab03013
Nucleocytoplasmic transport
alab03015
mRNA surveillance pathway
alab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122720022
09122 Translation
03013 Nucleocytoplasmic transport
122720022
03015 mRNA surveillance pathway
122720022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alab03019
]
122720022
Messenger RNA biogenesis [BR:
alab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122720022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
122720022
NCBI-ProteinID:
XP_043802351
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MSDTRRRRKSNQSCGSDDLSDSCEELNATKETQSSEQTDGHQDSECEIYPSDSDAESQDG
ALRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTTDEVIDSTAESQSERET
KEKKVWKDKEDRWDHDRYNDEEQAPKSHEELIAVYGYDIRNEEGPPRARRRRRYGRGPNK
YTRNWEDEDAYGKPGSNILNRNRRFNRSGEDFPALGTNKNASAHVEEPVISSAWYSSKNK
SQNKVPNFPPLQTQNDTSSKTKSSHTSTTHTNENKAPNEPTNPAWKKDTKHSPHTQNSNG
NSGAGGDADKLVNTKTSPRDNNKRNIQESVSLAASKTRGRGFRTNANNNMVTNRTIETKP
KGRGAGPISTENKRNNIRSDDEQQITHDMKHINVNDSAQYHQSGRHNKSFYGQSSNQQRT
GTVPPRMQQQSHSQQQQPQQQQQQQSIQQDSSANRPKRYSSLRQRPTISDNPGQQNYPPQ
HGQHNQHSQHSQHSQHNQHNQHGQHGQHGQHGYFSPQAGNSRGVLDSQGYPQSHFEQSTP
VATATAPLAGQPVIPIPPNGQPASYAPPPFLVPPPQFIPPQTPASIINYVSGPNGPAFQP
NYQGYQGYSPPVQPQRPPPPQELFQPQGCTYYSPAQQQQQSAPMRRPKAAIPILPPPENQ
QHQTGRGRGRSTQPQQMNQPGSIQQTEQEVKTNSVEDDQKIISEQFDNMQIEQPTSDVQE
TQKIEDSSVIMNTVIENTEKENIKNIEPEATVNLENTTADQLNDISANDSSKIIINEQDI
IPLKTTQVIIEETKNDSNKIESTTTEITAVEETAA
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatacaagacgacgacgaaaatctaatcagtcttgtggttctgacgacctctcg
gactcttgtgaagaattaaatgcaacgaaagaaacccagagcagtgaacaaactgatggt
catcaagattcggaatgtgaaatttatccttctgattctgatgctgaatctcaagatggt
gcattgcgagaaagtggtgatggccaagaagaagaaaaaccacaaaaaaaattagatgat
gatgaagacagacgtaatccacaatatattcctaagagaggaacattttatgaacatgat
gatagaacaactgatgaagtaatagatagtactgctgaatcacaaagtgaaagagaaacc
aaagaaaaaaaagtatggaaagataaagaagataggtgggatcatgatcgatataatgat
gaagagcaagcaccaaaaagtcatgaagaattaatagcagtttatggttatgatataaga
aatgaagaaggtccacctagagctagaagaagaagaagatatggtcgtggacctaataaa
tatacacgtaattgggaagatgaggatgcatatggaaaacctgggagtaatattctaaat
aggaatagaagatttaatagaagtggtgaagattttccagctctaggaacaaataaaaat
gcttctgcacatgtagaagaaccagtaatctcctcagcttggtacagcagtaaaaataaa
tcacaaaataaagtaccaaattttccacctctacaaactcaaaatgatacaagctcaaaa
acgaagtctagccatacatctactactcatacaaatgaaaataaagctcctaatgaacct
acaaatccagcttggaaaaaagatactaaacattcacctcatacacaaaatagtaatgga
aatagtggagctggtggtgatgcagataaattagttaatacaaaaacctctccaagagat
aataacaagaggaacattcaagagtctgtaagcttggcagcgagtaaaactcgtggacga
ggattcagaacaaatgctaataacaatatggtcaccaatagaacaattgagactaaacca
aagggacgtggagcgggtccaatttccacagagaataaaagaaataatatacgaagtgat
gatgaacaacaaattactcatgatatgaaacatattaatgttaatgatagtgctcaatat
catcaaagtggaagacataataaaagcttttatgggcaatcctcaaatcaacagaggaca
ggaactgtacctccaagaatgcaacaacaatctcattcacaacaacaacaaccacagcaa
caacaacaacaacagtcaattcaacaagacagttctgccaataggccaaaacgttattct
agtttgcgacagcgacctactatttcagataatccaggtcaacaaaattatccaccacaa
catggacaacataatcagcatagtcaacatagtcaacatagtcaacacaatcagcataat
caacatggacaacatggccaacacggtcaacatggatatttttctcctcaagctggaaat
tcaagaggtgttttagattcacaaggatatcctcaaagtcattttgaacaatctacacct
gttgctactgcaactgcacctttggctggacaacctgtgattcctataccacctaatggt
caacctgctagttatgctccgccaccatttttagtaccaccaccgcaatttattcctcca
caaactccagctagtataattaattatgtttctggtccaaatggaccagcatttcaaccg
aattatcaaggttatcaaggctatagtccaccagtacagccacagcgtcctccacctcca
caagaattgttccaaccgcaaggttgcacttattatagtccagctcaacaacaacaacaa
tcagctccaatgagacggccaaaggcggctattcctattcttccaccacctgaaaatcaa
caacaccaaaccggtcgaggaagaggtagaagcacacagcctcaacaaatgaatcaacct
ggtagtatacaacagactgaacaagaagttaaaactaattcggtggaagacgatcagaag
attatatcagaacaatttgataatatgcaaattgaacaacctacgtcagatgttcaagaa
acacagaaaatcgaagattcgagtgtaataatgaatactgtgattgagaatactgaaaaa
gagaatattaaaaatatcgaacctgaagctactgtgaatttagaaaatactactgcggat
caattaaatgatataagtgctaatgactcatcaaaaatcattataaatgaacaagatatt
attccacttaaaactacgcaagtaataattgaagagactaaaaatgattcaaataaaatt
gaaagcactacgactgaaattactgctgttgaagaaacagcagcttga
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